fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios

MSMS: a coalescent simulation program including recombination, demographic structure and selection at a single locus

(2010) Gregory Ewing et al.   BIOINFORMATICS

ABCtoolbox: a versatile toolkit for approximate Bayesian computations

(2010) Daniel Wegmann et al.   BMC BIOINFORMATICS

A map of human genome variation from population-scale sequencing

(2010) Richard M. Durbin et al.   NATURE

PopABC: a program to infer historical demographic parameters

(2009) Joao S. Lopes et al.   BIOINFORMATICS

Using Classical Population Genetics Tools with Heterochroneous Data: Time Matters!

(2009) Frantz Depaulis et al.   PLoS One

Sequential Markov coalescent algorithms for population models with demographic structure

(2009) A. Eriksson et al.   THEORETICAL POPULATION BIOLOGY

Inferring population history with DIY ABC: a user-friendly approach to approximate Bayesian computation

(2008) Jean-Marie Cornuet et al.   BIOINFORMATICS

Simulation of Genomes: A Review

(2008) Antonio Carvajal-Rodriguez   CURRENT GENOMICS

Exploring Population Genetic Models With Recombination Using Efficient Forward-Time Simulations

(2008) B. Padhukasahasram et al.   GENETICS

Fast and flexible simulation of DNA sequence data

(2008) G. K. Chen et al.   GENOME RESEARCH