De novo sequencing, assembly and characterisation of Aloe vera transcriptome and analysis of expression profiles of genes related to saponin and anthraquinone metabolism

Comparative transcriptome analysis within the Lolium/Festuca species complex reveals high sequence conservation

(2015) Adrian Czaban et al.   BMC GENOMICS

RNA-Seq analysis and transcriptome assembly for blackberry (Rubus sp. Var. Lochness) fruit

(2015) Daniel Garcia-Seco et al.   BMC GENOMICS

Transcriptome sequencing and analysis of rubber tree (Hevea brasiliensis Muell.) to discover putative genes associated with tapping panel dryness (TPD)

(2015) Jin-Ping Liu et al.   BMC GENOMICS

Transcriptome sequencing and analysis of major genes involved in calcium signaling pathways in pear plants (Pyrus calleryana Decne.)

(2015) Yuanyuan Xu et al.   BMC GENOMICS

Global transcriptome and gene regulation network for secondary metabolite biosynthesis of tea plant (Camellia sinensis)

(2015) Chun-Fang Li et al.   BMC GENOMICS

Characterisation of Two Oxidosqualene Cyclases Responsible for Triterpenoid Biosynthesis in Ilex asprella

(2015) Xiasheng Zheng et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Roles of lignin biosynthesis and regulatory genes in plant development

(2015) Jinmi Yoon et al.   Journal of Integrative Plant Biology

KEGG as a reference resource for gene and protein annotation

(2015) Minoru Kanehisa et al.   NUCLEIC ACIDS RESEARCH

Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef)

(2014) Gina Cannarozzi et al.   BMC GENOMICS

De novo transcriptome sequencing and digital gene expression analysis predict biosynthetic pathway of rhynchophylline and isorhynchophylline from Uncaria rhynchophylla, a non-model plant with potent anti-alzheimer’s properties

(2014) Qianqian Guo et al.   BMC GENOMICS

De novo leaf and root transcriptome analysis identified novel genes involved in Steroidal sapogenin biosynthesis in Asparagus racemosus

(2014) Swati Upadhyay et al.   BMC GENOMICS

De novo sequencing and comparative analysis of holy and sweet basil transcriptomes

(2014) Shubhra Rastogi et al.   BMC GENOMICS

Skin permeation enhancement effects of the gel and whole-leaf materials ofAloe vera,Aloe marlothiiandAloe ferox

(2014) Lizelle T. Fox et al.   JOURNAL OF PHARMACY AND PHARMACOLOGY

Molecular cloning and differential expression analysis of a squalene synthase gene from Dioscorea zingiberensis, an important pharmaceutical plant

(2014) Yun Ye et al.   MOLECULAR BIOLOGY REPORTS

Regulation of Specialized Metabolism by WRKY Transcription Factors

(2014) Craig Schluttenhofer et al.   PLANT PHYSIOLOGY

Combinatorial biosynthesis of sapogenins and saponins in Saccharomyces cerevisiae using a C-16  hydroxylase from Bupleurum falcatum

(2014) T. Moses et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

De novo sequencing and assembly of Centella asiatica leaf transcriptome for mapping of structural, functional and regulatory genes with special reference to secondary metabolism

(2013) Rajender S. Sangwan et al.   GENE

Characterization of Squalene synthase Gene from Chlorophytum borivilianum (Sant. and Fernand.)

(2013) Shikha Kalra et al.   MOLECULAR BIOTECHNOLOGY

PlantTFDB 3.0: a portal for the functional and evolutionary study of plant transcription factors

(2013) Jinpu Jin et al.   NUCLEIC ACIDS RESEARCH

Probiotic Lactobacillus rhamnosus GG and Aloe vera gel improve lipid profiles in hypercholesterolemic rats

(2013) Manoj Kumar et al.   NUTRITION

De Novo Assembly, Functional Annotation and Comparative Analysis of Withania somnifera Leaf and Root Transcriptomes to Identify Putative Genes Involved in the Withanolides Biosynthesis

(2013) Parul Gupta et al.   PLoS One

Global Transcriptome Sequencing Using the Illumina Platform and the Development of EST-SSR Markers in Autotetraploid Alfalfa

(2013) Zhipeng Liu et al.   PLoS One

Homology modeling and docking studies on oxidosqualene cyclases associated with primary and secondary metabolism of Centella asiatica

(2013) Vadlapudi Kumar et al.   SpringerPlus

CD-HIT: accelerated for clustering the next-generation sequencing data

(2012) Limin Fu et al.   BIOINFORMATICS

Transcriptional Regulation of Plant Secondary MetabolismF

(2012) Chang-Qing Yang et al.   Journal of Integrative Plant Biology

De novo assembly and characterization of root transcriptome using Illumina paired-end sequencing and development of cSSR markers in sweetpotato (Ipomoea batatas)

(2011) Zhangying Wang et al.   BMC GENOMICS

Characterization of the sesame (Sesamum indicum L.) global transcriptome using Illumina paired-end sequencing and development of EST-SSR markers

(2011) Wenliang Wei et al.   BMC GENOMICS

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Cape aloes—A review of the phytochemistry, pharmacology and commercialisation of Aloe ferox

(2011) Weiyang Chen et al.   Phytochemistry Letters

Anti-hyperglycemic and Anti-hypercholesterolemic Effects ofAloe veraLeaf Gel in Hyperlipidemic Type 2 Diabetic Patients: A Randomized Double-Blind Placebo-Controlled Clinical Trial

(2011) Hasan Huseini et al.   PLANTA MEDICA

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

De novo sequencing and analysis of the American ginseng root transcriptome using a GS FLX Titanium platform to discover putative genes involved in ginsenoside biosynthesis

(2010) Chao Sun et al.   BMC GENOMICS

Influence of environmental abiotic factors on the content of saponins in plants

(2010) Anna Szakiel et al.   PHYTOCHEMISTRY REVIEWS

Digital Gene Expression Signatures for Maize Development

(2010) A. L. Eveland et al.   PLANT PHYSIOLOGY

Source to sink: regulation of carotenoid biosynthesis in plants

(2010) Christopher I. Cazzonelli et al.   TRENDS IN PLANT SCIENCE

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Functional Characterization and Localization ofPneumocystis cariniiLanosterol Synthase

(2009) Tiffany M. Joffrion et al.   EUKARYOTIC CELL

Arabidopsis Bile Acid:Sodium Symporter Family Protein 5 is Involved in Methionine-Derived Glucosinolate Biosynthesis

(2009) Yuji Sawada et al.   PLANT AND CELL PHYSIOLOGY

Identification of Defense Compounds in Barbarea vulgaris against the Herbivore Phyllotreta nemorum by an Ecometabolomic Approach

(2009) V. Kuzina et al.   PLANT PHYSIOLOGY

Composition and Applications of Aloe vera Leaf Gel

(2008) Josias Hamman   MOLECULES