Transcriptome sequencing and analysis of major genes involved in calcium signaling pathways in pear plants (Pyrus calleryana Decne.)

Synergistic and Antagonistic Effects of Salinity and pH on Germination in Switchgrass (Panicum virgatum L.)

(2014) Yuan Liu et al.   PLoS One

Identification of novel transcripts and noncoding RNAs in bovine skin by deep next generation sequencing

(2013) Rosemarie Weikard et al.   BMC GENOMICS

Transcriptome profiling of fruit development and maturation in Chinese white pear (Pyrus bretschneideri Rehd)

(2013) Min Xie et al.   BMC GENOMICS

Transcriptomic profiling of the salt-stress response in the wild recretohalophyte Reaumuria trigyna

(2013) Zhen-hua Dang et al.   BMC GENOMICS

De novo transcriptome sequencing of radish (Raphanus sativus L.) and analysis of major genes involved in glucosinolate metabolism

(2013) Yan Wang et al.   BMC GENOMICS

Genome-wide identification and functional analyses of calmodulin genes in Solanaceous species

(2013) Yuan Zhao et al.   BMC PLANT BIOLOGY

The promoter of CBL-interacting protein kinase 15 delivers the interference of sugar regulation by perturbed oxidative phosphorylation

(2013) Hui-kyeong Yim et al.   Genes & Genomics

Systematic evaluation of spliced alignment programs for RNA-seq data

(2013) Pär G Engström et al.   NATURE METHODS

Transcriptome Analysis of Japanese Pear (Pyrus pyrifolia Nakai) Flower Buds Transitioning Through Endodormancy

(2013) Songling Bai et al.   PLANT AND CELL PHYSIOLOGY

The CBL–CIPK network mediates different signaling pathways in plants

(2013) Qinyang Yu et al.   PLANT CELL REPORTS

Transcriptome Profiling of Radish (Raphanus sativus L.) Root and Identification of Genes Involved in Response to Lead (Pb) Stress with Next Generation Sequencing

(2013) Yan Wang et al.   PLoS One

Transcriptome Profile at Different Physiological Stages Reveals Potential Mode for Curly Fleece in Chinese Tan Sheep

(2013) Xiaolong Kang et al.   PLoS One

A Nuclear Calcium-Sensing Pathway Is Critical for Gene Regulation and Salt Stress Tolerance in Arabidopsis

(2013) Qingmei Guan et al.   PLoS Genetics

Evaluation of reference genes for gene expression studies in radish (Raphanus sativus L.) using quantitative real-time PCR

(2012) Yuanyuan Xu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Epigenetic features are significantly associated with alternative splicing

(2012) Yuanpeng Zhou et al.   BMC GENOMICS

De novo characterization of the Chinese fir (Cunninghamia lanceolata) transcriptome and analysis of candidate genes involved in cellulose and lignin biosynthesis

(2012) Hua-Hong Huang et al.   BMC GENOMICS

Transcriptomic analysis of ‘Suli’ pear (Pyrus pyrifolia white pear group) buds during the dormancy by RNA-Seq

(2012) Guoqin Liu et al.   BMC GENOMICS

The genome of the pear (Pyrus bretschneideri Rehd.)

(2012) J. Wu et al.   GENOME RESEARCH

GENCODE: The reference human genome annotation for The ENCODE Project

(2012) J. Harrow et al.   GENOME RESEARCH

Phosphorylation of Calcineurin B-like (CBL) Calcium Sensor Proteins by Their CBL-interacting Protein Kinases (CIPKs) Is Required for Full Activity of CBL-CIPK Complexes toward Their Target Proteins

(2012) Kenji Hashimoto et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Interrelationship between calmodulin (CaM) and H2O2 in abscisic acid-induced antioxidant defense in the seedlings of Panax ginseng

(2012) Shohana Parvin et al.   MOLECULAR BIOLOGY REPORTS

Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks

(2012) Cole Trapnell et al.   Nature Protocols

Characterization and Expression of a Phytochelatin Synthase Gene in Birch-leaf Pear (Pyrus betulaefolia Bunge)

(2012) You Hong Chang et al.   PLANT MOLECULAR BIOLOGY REPORTER

De novo sequencing and a comprehensive analysis of purple sweet potato (Impomoea batatas L.) transcriptome

(2012) Fuliang Xie et al.   PLANTA

Transcriptome Analysis of the Model Protozoan, Tetrahymena thermophila, Using Deep RNA Sequencing

(2012) Jie Xiong et al.   PLoS One

The First Illumina-Based De Novo Transcriptome Sequencing and Analysis of Safflower Flowers

(2012) Huang Lulin et al.   PLoS One

Using Drosophila melanogaster as a Model for Genotoxic Chemical Mutational Studies with a New Program, SnpSift

(2012) Pablo Cingolani et al.   Frontiers in Genetics

Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds

(2011) Cheng-Ying Shi et al.   BMC GENOMICS

Signal transduction during cold, salt, and drought stresses in plants

(2011) Guo-Tao Huang et al.   MOLECULAR BIOLOGY REPORTS

Heterologous Expression of the Chrysanthemum R2R3-MYB Transcription Factor CmMYB2 Enhances Drought and Salinity Tolerance, Increases Hypersensitivity to ABA and Delays Flowering in Arabidopsis thaliana

(2011) Hong Shan et al.   MOLECULAR BIOTECHNOLOGY

The Language of Calcium Signaling

(2010) Antony N. Dodd et al.   Annual Review of Plant Biology

Deep RNA sequencing at single base-pair resolution reveals high complexity of the rice transcriptome

(2010) G. Zhang et al.   GENOME RESEARCH

SNP discovery in the bovine milk transcriptome using RNA-Seq technology

(2010) Angela Cánovas et al.   MAMMALIAN GENOME

Alternative splicing and evolution: diversification, exon definition and function

(2010) Hadas Keren et al.   NATURE REVIEWS GENETICS

MYB transcription factors in Arabidopsis

(2010) Christian Dubos et al.   TRENDS IN PLANT SCIENCE

SNP detection for massively parallel whole-genome resequencing

(2009) R. Li et al.   GENOME RESEARCH

Genome-wide mapping of alternative splicing in Arabidopsis thaliana

(2009) S. A. Filichkin et al.   GENOME RESEARCH

Salt stress-induced alterations in the root proteome of barley genotypes with contrasting response towards salinity

(2009) Katja Witzel et al.   JOURNAL OF EXPERIMENTAL BOTANY

The CBL-CIPK Ca2+-decoding signaling network: function and perspectives

(2009) Stefan Weinl et al.   NEW PHYTOLOGIST

Mechanisms of Salinity Tolerance

(2008) Rana Munns et al.   Annual Review of Plant Biology

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS

Soybean GmMYB76, GmMYB92 and GmMYB177 genes confer stress tolerance in transgenic Arabidopsis plants

(2008) Yong Liao et al.   CELL RESEARCH

Alternative isoform regulation in human tissue transcriptomes

(2008) Eric T. Wang et al.   NATURE

Calcineurin B-Like family in Populus: comparative genome analysis and expression pattern under cold, drought and salt stress treatment

(2008) Hechen Zhang et al.   PLANT GROWTH REGULATION

Evolutionary and functional study of the CDPK gene family in wheat (Triticum aestivum L.)

(2008) Ai-Li Li et al.   PLANT MOLECULAR BIOLOGY

The CBL–CIPK network in plant calcium signaling

(2008) Sheng Luan   TRENDS IN PLANT SCIENCE