A combined meta-barcoding and shotgun metagenomic analysis of spontaneous wine fermentation
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A combined meta-barcoding and shotgun metagenomic analysis of spontaneous wine fermentation
Authors
Keywords
-
Journal
GigaScience
Volume 6, Issue 7, Pages 1-10
Publisher
Oxford University Press (OUP)
Online
2017-06-08
DOI
10.1093/gigascience/gix040
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Pyrosequencing reveals regional differences in fruit-associated fungal communities
- (2014) Michael W. Taylor et al. ENVIRONMENTAL MICROBIOLOGY
- A long term field study of the effect of fungicides penconazole and sulfur on yeasts in the vineyard
- (2014) Gustavo Cordero-Bueso et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Influence of the farming system on the epiphytic yeasts and yeast-like fungi colonizing grape berries during the ripening process
- (2014) Guilherme Martins et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- Swarm: robust and fast clustering method for amplicon-based studies
- (2014) Frédéric Mahé et al. PeerJ
- Improved Selection of Internal Transcribed Spacer-Specific Primers Enables Quantitative, Ultra-High-Throughput Profiling of Fungal Communities
- (2013) Nicholas A. Bokulich et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
- (2013) Paul J. McMurdie et al. PLoS One
- Characterization of Epiphytic Bacterial Communities from Grapes, Leaves, Bark and Soil of Grapevine Plants Grown, and Their Relations
- (2013) Guilherme Martins et al. PLoS One
- PNAS Plus: From the Cover: Microbial biogeography of wine grapes is conditioned by cultivar, vintage, and climate
- (2013) N. A. Bokulich et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Metagenomic microbial community profiling using unique clade-specific marker genes
- (2012) Nicola Segata et al. NATURE METHODS
- Fast gapped-read alignment with Bowtie 2
- (2012) Ben Langmead et al. NATURE METHODS
- Next-Generation Sequencing Reveals Significant Bacterial Diversity of Botrytized Wine
- (2012) Nicholas A. Bokulich et al. PLoS One
- PCR Biases Distort Bacterial and Archaeal Community Structure in Pyrosequencing Datasets
- (2012) Ameet J. Pinto et al. PLoS One
- The Vineyard Yeast Microbiome, a Mixed Model Microbial Map
- (2012) Mathabatha Evodia Setati et al. PLoS One
- FLASH: fast length adjustment of short reads to improve genome assemblies
- (2011) T. Magoc et al. BIOINFORMATICS
- BEDTools: a flexible suite of utilities for comparing genomic features
- (2010) Aaron R. Quinlan et al. BIOINFORMATICS
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Influence of the farming system and vine variety on yeast communities associated with grape berries
- (2010) Gustavo Cordero-Bueso et al. INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
- QIIME allows analysis of high-throughput community sequencing data
- (2010) J Gregory Caporaso et al. NATURE METHODS
- The Sequence Alignment/Map format and SAMtools
- (2009) H. Li et al. BIOINFORMATICS
- Wine yeasts for the future
- (2008) Graham H. Fleet FEMS YEAST RESEARCH
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now