Next-Generation Sequencing Reveals Significant Bacterial Diversity of Botrytized Wine

Differentiation of mixed lactic acid bacteria communities in beverage fermentations using targeted terminal restriction fragment length polymorphism

(2012) Nicholas A. Bokulich et al.   FOOD MICROBIOLOGY

Profiling the Yeast Communities of Wine Fermentations Using Terminal Restriction Fragment Length Polymorphism Analysis

(2011) N. A. Bokulich et al.   AMERICAN JOURNAL OF ENOLOGY AND VITICULTURE

Bacterial species associated with sound and Botrytis-infected grapes from a Greek vineyard

(2011) Aspasia A. Nisiotou et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Resistant Starches Types 2 and 4 Have Differential Effects on the Composition of the Fecal Microbiota in Human Subjects

(2010) Inés Martínez et al.   PLoS One

Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample

(2010) J. G. Caporaso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

(2009) Victor Kunin et al.   ENVIRONMENTAL MICROBIOLOGY

Effect of fermentation temperature on microbial population evolution using culture-independent and dependent techniques

(2009) Imma Andorrà et al.   FOOD RESEARCH INTERNATIONAL

Accurate determination of microbial diversity from 454 pyrosequencing data

(2009) Christopher Quince et al.   NATURE METHODS

Effect of oenological practices on microbial populations using culture-independent techniques

(2008) Imma Andorrà et al.   FOOD MICROBIOLOGY

Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex

(2008) Micah Hamady et al.   NATURE METHODS

The Ribosomal Database Project: improved alignments and new tools for rRNA analysis

(2008) J. R. Cole et al.   NUCLEIC ACIDS RESEARCH