Cellular trade-offs and optimal resource allocation during cyanobacterial diurnal growth
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Cellular trade-offs and optimal resource allocation during cyanobacterial diurnal growth
Authors
Keywords
-
Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 114, Issue 31, Pages E6457-E6465
Publisher
Proceedings of the National Academy of Sciences
Online
2017-07-19
DOI
10.1073/pnas.1617508114
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Culturing Synechocystis sp. Strain PCC 6803 with N2and CO2in a Diel Regime Reveals Multiphase Glycogen Dynamics with Low Maintenance Costs
- (2016) S. Andreas Angermayr et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Costs of Clock-Environment Misalignment in Individual Cyanobacterial Cells
- (2016) Guillaume Lambert et al. BIOPHYSICAL JOURNAL
- Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitrokcatmeasurements
- (2016) Dan Davidi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- pH determines the energetic efficiency of the cyanobacterial CO2concentrating mechanism
- (2016) Niall M. Mangan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Unique attributes of cyanobacterial metabolism revealed by improved genome-scale metabolic modeling and essential gene analysis
- (2016) Jared T. Broddrick et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Diurnal Regulation of Cellular Processes in the Cyanobacterium Synechocystis sp. Strain PCC 6803: Insights from Transcriptomic, Fluxomic, and Physiological Analyses
- (2016) Rajib Saha et al. mBio
- Constrained Allocation Flux Balance Analysis
- (2016) Matteo Mori et al. PLoS Computational Biology
- A Comparison of the Costs and Benefits of Bacterial Gene Expression
- (2016) Morgan N. Price et al. PLoS One
- Principles of proteome allocation are revealed using proteomic data and genome-scale models
- (2016) Laurence Yang et al. Scientific Reports
- Giving Time Purpose: TheSynechococcus elongatusClock in a Broader Network Context
- (2015) Ryan K. Shultzaberger et al. Annual Review of Genetics
- Genome-scale modelling of microbial metabolism with temporal and spatial resolution
- (2015) M. A. Henson BIOCHEMICAL SOCIETY TRANSACTIONS
- Growth optimization ofSynechococcus elongatusPCC7942 in lab flasks and a 2-D photobioreactor
- (2015) David Kuan et al. CANADIAN JOURNAL OF CHEMICAL ENGINEERING
- Next-generation genome-scale models for metabolic engineering
- (2015) Zachary A King et al. CURRENT OPINION IN BIOTECHNOLOGY
- Dynamic optimization of metabolic networks coupled with gene expression
- (2015) Steffen Waldherr et al. JOURNAL OF THEORETICAL BIOLOGY
- Quantitative prediction of genome-wide resource allocation in bacteria
- (2015) Anne Goelzer et al. METABOLIC ENGINEERING
- Quantitative proteomic analysis reveals a simple strategy of global resource allocation in bacteria
- (2015) S. Hui et al. Molecular Systems Biology
- The circadian oscillator inSynechococcus elongatuscontrols metabolite partitioning during diurnal growth
- (2015) Spencer Diamond et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- The bioenergetic costs of a gene
- (2015) Michael Lynch et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mechanistic links between cellular trade-offs, gene expression, and growth
- (2015) Andrea Y. Weiße et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Synechococcus elongatus UTEX 2973, a fast growing cyanobacterial chassis for biosynthesis using light and CO2
- (2015) Jingjie Yu et al. Scientific Reports
- Elucidating temporal resource allocation and diurnal dynamics in phototrophic metabolism using conditional FBA
- (2015) Marco Rügen et al. Scientific Reports
- Daily Expression Pattern of Protein-Encoding Genes and Small Noncoding RNAs in Synechocystis sp. Strain PCC 6803
- (2014) Christian Beck et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Protein Accounting in the Cellular Economy
- (2014) Nora Vázquez-Laslop et al. CELL
- Rhythms in Energy Storage Control the Ability of the Cyanobacterial Circadian Clock to Reset
- (2014) Gopal K. Pattanayak et al. CURRENT BIOLOGY
- Daily Rhythms in the CyanobacteriumSynechococcus elongatusProbed by High-resolution Mass Spectrometry–based Proteomics Reveals a Small Defined Set of Cyclic Proteins
- (2014) Ana C. L. Guerreiro et al. MOLECULAR & CELLULAR PROTEOMICS
- A Diel Flux Balance Model Captures Interactions between Light and Dark Metabolism during Day-Night Cycles in C3 and Crassulacean Acid Metabolism Leaves
- (2014) C. Y. M. Cheung et al. PLANT PHYSIOLOGY
- How cyanobacteria pose new problems to old methods: challenges in microarray time series analysis
- (2013) Robert Lehmann et al. BMC BIOINFORMATICS
- Circadian Control of Global Gene Expression by the Cyanobacterial Master Regulator RpaA
- (2013) Joseph S. Markson et al. CELL
- Genome-scale models of metabolism and gene expression extend and refine growth phenotype prediction
- (2013) E. J. O{middle dot}Brien et al. Molecular Systems Biology
- Ultradian metabolic rhythm in the diazotrophic cyanobacterium Cyanothece sp. ATCC 51142
- (2013) J. Cerveny et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Glycolytic strategy as a tradeoff between energy yield and protein cost
- (2013) A. Flamholz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Flux Balance Analysis of Cyanobacterial Metabolism: The Metabolic Network of Synechocystis sp. PCC 6803
- (2013) Henning Knoop et al. PLoS Computational Biology
- The diversity of cyanobacterial metabolism: genome analysis of multiple phototrophic microorganisms
- (2012) Christian Beck et al. BMC GENOMICS
- BRENDA in 2013: integrated reactions, kinetic data, enzyme function data, improved disease classification: new options and contents in BRENDA
- (2012) Ida Schomburg et al. NUCLEIC ACIDS RESEARCH
- Transcriptome and Proteome Dynamics of a Light-Dark Synchronized Bacterial Cell Cycle
- (2012) Jacob R. Waldbauer et al. PLoS One
- Detailing the optimality of photosynthesis in cyanobacteria through systems biology analysis
- (2012) J. Nogales et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Cell design in bacteria as a convex optimization problem
- (2011) Anne Goelzer et al. AUTOMATICA
- SABIO-RK--database for biochemical reaction kinetics
- (2011) U. Wittig et al. NUCLEIC ACIDS RESEARCH
- Genome-Scale Metabolic Modeling Elucidates the Role of Proliferative Adaptation in Causing the Warburg Effect
- (2011) Tomer Shlomi et al. PLoS Computational Biology
- The Metabolic Network of Synechocystis sp. PCC 6803: Systemic Properties of Autotrophic Growth
- (2010) Henning Knoop et al. PLANT PHYSIOLOGY
- Interdependence of Cell Growth and Gene Expression: Origins and Consequences
- (2010) M. Scott et al. SCIENCE
- Shifts in growth strategies reflect tradeoffs in cellular economics
- (2009) Douwe Molenaar et al. Molecular Systems Biology
- Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli
- (2009) Bryson D Bennett et al. Nature Chemical Biology
- Cyanobacterial daily life with Kai-based circadian and diurnal genome-wide transcriptional control in Synechococcus elongatus
- (2009) H. Ito et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Evolved physiological responses of phytoplankton to their integrated growth environment
- (2008) M. J Behrenfeld et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search