Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitrokcatmeasurements
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Global characterization of in vivo enzyme catalytic rates and their correspondence to in vitrokcatmeasurements
Authors
Keywords
-
Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 113, Issue 12, Pages 3401-3406
Publisher
Proceedings of the National Academy of Sciences
Online
2016-03-08
DOI
10.1073/pnas.1514240113
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Posttranslational regulation of microbial metabolism
- (2015) Karl Kochanowski et al. CURRENT OPINION IN MICROBIOLOGY
- Quantitative prediction of genome-wide resource allocation in bacteria
- (2015) Anne Goelzer et al. METABOLIC ENGINEERING
- Proteome reallocation in Escherichia coli with increasing specific growth rate
- (2015) Karl Peebo et al. Molecular BioSystems
- The quantitative and condition-dependent Escherichia coli proteome
- (2015) Alexander Schmidt et al. NATURE BIOTECHNOLOGY
- Programmed Evolution for Optimization of Orthogonal Metabolic Output in Bacteria
- (2015) Todd T. Eckdahl et al. PLoS One
- Computational protein design enables a novel one-carbon assimilation pathway
- (2015) Justin B. Siegel et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Quantification and Mass Isotopomer Profiling of α-Keto Acids in Central Carbon Metabolism
- (2014) Michael Zimmermann et al. ANALYTICAL CHEMISTRY
- Coordination of microbial metabolism
- (2014) Victor Chubukov et al. NATURE REVIEWS MICROBIOLOGY
- Visual account of protein investment in cellular functions
- (2014) W. Liebermeister et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Systematic Evaluation of Methods for Integration of Transcriptomic Data into Constraint-Based Models of Metabolism
- (2014) Daniel Machado et al. PLoS Computational Biology
- Pathway Thermodynamics Highlights Kinetic Obstacles in Central Metabolism
- (2014) Elad Noor et al. PLoS Computational Biology
- COBRApy: COnstraints-Based Reconstruction and Analysis for Python
- (2013) Ali Ebrahim et al. BMC Systems Biology
- A note on the kinetics of enzyme action: A decomposition that highlights thermodynamic effects
- (2013) Elad Noor et al. FEBS LETTERS
- A model of yeast glycolysis based on a consistent kinetic characterisation of all its enzymes
- (2013) Kieran Smallbone et al. FEBS LETTERS
- Escherichia coli achieves faster growth by increasing catalytic and translation rates of proteins
- (2013) Kaspar Valgepea et al. Molecular BioSystems
- Transcriptional regulation is insufficient to explain substrate-induced flux changes in Bacillus subtilis
- (2013) V. Chubukov et al. Molecular Systems Biology
- The Catalytic Site Atlas 2.0: cataloging catalytic sites and residues identified in enzymes
- (2013) Nicholas Furnham et al. NUCLEIC ACIDS RESEARCH
- Heterogeneity in protein expression induces metabolic variability in a modeledEscherichia colipopulation
- (2013) Piyush Labhsetwar et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Glycolytic strategy as a tradeoff between energy yield and protein cost
- (2013) A. Flamholz et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Consistent Estimation of Gibbs Energy Using Component Contributions
- (2013) Elad Noor et al. PLoS Computational Biology
- A Whole-Cell Computational Model Predicts Phenotype from Genotype
- (2012) Jonathan R. Karr et al. CELL
- Whyin vivomay not equalin vitro- new effectors revealed by measurement of enzymatic activities under the samein vivo-like assay conditions
- (2012) Rodolfo García-Contreras et al. FEBS Journal
- EcoCyc: fusing model organism databases with systems biology
- (2012) Ingrid M. Keseler et al. NUCLEIC ACIDS RESEARCH
- RELATCH: relative optimality in metabolic networks explains robust metabolic and regulatory responses to perturbations
- (2012) Joonhoon Kim et al. GENOME BIOLOGY
- Standardized Assay Medium To Measure Lactococcus lactis Enzyme Activities while Mimicking Intracellular Conditions
- (2011) Anisha Goel et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- UDP-N-acetylglucosamine enolpyruvyl transferase as a potential target for antibacterial chemotherapy: recent developments
- (2011) Ankur Gautam et al. APPLIED MICROBIOLOGY AND BIOTECHNOLOGY
- The Moderately Efficient Enzyme: Evolutionary and Physicochemical Trends Shaping Enzyme Parameters
- (2011) Arren Bar-Even et al. BIOCHEMISTRY
- A comprehensive genome-scale reconstruction of Escherichia coli metabolism--2011
- (2011) J. D. Orth et al. Molecular Systems Biology
- Physical limits of cells and proteomes
- (2011) K. A. Dill et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- An overview of enzymatic reagents for the removal of affinity tags
- (2011) David S. Waugh PROTEIN EXPRESSION AND PURIFICATION
- Genome-Scale Metabolic Modeling Elucidates the Role of Proliferative Adaptation in Causing the Warburg Effect
- (2011) Tomer Shlomi et al. PLoS Computational Biology
- Modular rate laws for enzymatic reactions: thermodynamics, elasticities and implementation
- (2010) Wolfram Liebermeister et al. BIOINFORMATICS
- Measuring enzyme activities under standardized in vivo-like conditions for systems biology
- (2010) Karen van Eunen et al. FEBS Journal
- Kinetic and Thermodynamic Aspects of Enzyme Control and Regulation†
- (2010) Johann M. Rohwer et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Parameter Balancing in Kinetic Models of Cell Metabolism†
- (2010) Timo Lubitz et al. JOURNAL OF PHYSICAL CHEMISTRY B
- Omic data from evolved E. coli are consistent with computed optimal growth from genome-scale models
- (2010) Nathan E Lewis et al. Molecular Systems Biology
- What is flux balance analysis?
- (2010) Jeffrey D Orth et al. NATURE BIOTECHNOLOGY
- Design and analysis of synthetic carbon fixation pathways
- (2010) A. Bar-Even et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Symmetrical Refolding of Protein Domains and Subunits: Example of the Dimeric Two-Domain 3-Isopropylmalate Dehydrogenases†
- (2009) Éva Gráczer et al. BIOCHEMISTRY
- Absolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coli
- (2009) Bryson D Bennett et al. Nature Chemical Biology
- BioNumbers—the database of key numbers in molecular and cell biology
- (2009) Ron Milo et al. NUCLEIC ACIDS RESEARCH
- Allosteric regulation and catalysis emerge via a common route
- (2008) Nina M Goodey et al. Nature Chemical Biology
- Untangling the glutamate dehydrogenase allosteric nightmare
- (2008) Thomas J. Smith et al. TRENDS IN BIOCHEMICAL SCIENCES
Find Funding. Review Successful Grants.
Explore over 25,000 new funding opportunities and over 6,000,000 successful grants.
ExploreFind the ideal target journal for your manuscript
Explore over 38,000 international journals covering a vast array of academic fields.
Search