The airway microbiota in early cystic fibrosis lung disease

Concordance between upper and lower airway microbiota in infants with cystic fibrosis

(2017) Sabine M.P.J. Prevaes et al.   EUROPEAN RESPIRATORY JOURNAL

The lower airway microbiota in early cystic fibrosis lung disease: a longitudinal analysis

(2017) Katherine B Frayman et al.   THORAX

Development of the Nasopharyngeal Microbiota in Infants with Cystic Fibrosis

(2016) Sabine M. P. J. Prevaes et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Nasopharyngeal Microbiome in Respiratory Syncytial Virus Resembles Profile Associated with Increased Childhood Asthma Risk

(2016) Christian Rosas-Salazar et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Nasopharyngeal Microbiota, Host Transcriptome, and Disease Severity in Children with Respiratory Syncytial Virus Infection

(2016) Wouter A. A. de Steenhuijsen Piters et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Impact of micro-environmental changes on respiratory tract infections with intracellular bacteria

(2016) Kensuke Shima et al.   FEBS LETTERS

Respiratory syncytial virus and rhinovirus severe bronchiolitis are associated with distinct nasopharyngeal microbiota

(2016) Jonathan M. Mansbach et al.   JOURNAL OF ALLERGY AND CLINICAL IMMUNOLOGY

Differences in the Nasopharyngeal Microbiome During Acute Respiratory Tract Infection With Human Rhinovirus and Respiratory Syncytial Virus in Infancy

(2016) Christian Rosas-Salazar et al.   JOURNAL OF INFECTIOUS DISEASES

Induced sputum to detect lung pathogens in young children with cystic fibrosis

(2016) Pamela D'Sylva et al.   PEDIATRIC PULMONOLOGY

How colonization by microbiota in early life shapes the immune system

(2016) Thomas Gensollen et al.   SCIENCE

Bile signalling promotes chronic respiratory infections and antibiotic tolerance

(2016) F. Jerry Reen et al.   Scientific Reports

The nasal microbiota in infants with cystic fibrosis in the first year of life: a prospective cohort study

(2016) Moana Mika et al.   Lancet Respiratory Medicine

Early life nasal microbiota in infants with cystic fibrosis

(2016) Fiona J Whelan et al.   Lancet Respiratory Medicine

The microbiota in bronchoalveolar lavage from young children with chronic lung disease includes taxa present in both the oropharynx and nasopharynx

(2016) R. L. Marsh et al.   Microbiome

Nasopharyngeal microbiota composition of children is related to the frequency of upper respiratory infection and acute sinusitis

(2016) Clark A. Santee et al.   Microbiome

Interactions of Respiratory Viruses and the Nasal Microbiota during the First Year of Life in Healthy Infants

(2016) Insa Korten et al.   mSphere

Development of Upper Respiratory Tract Microbiota in Infancy is Affected by Mode of Delivery

(2016) Astrid A.T.M. Bosch et al.   EBioMedicine

Airway Microbiota in Bronchoalveolar Lavage Fluid from Clinically Well Infants with Cystic Fibrosis

(2016) Theresa A. Laguna et al.   PLoS One

The Infant Nasopharyngeal Microbiome Impacts Severity of Lower Respiratory Infection and Risk of Asthma Development

(2015) Shu Mei Teo et al.   Cell Host & Microbe

The bacterial microbiota in inflammatory lung diseases

(2015) Gary B. Huffnagle et al.   CLINICAL IMMUNOLOGY

Airway microbiota and acute respiratory infection in children

(2015) Kohei Hasegawa et al.   Expert Review of Clinical Immunology

Associations between Gut Microbial Colonization in Early Life and Respiratory Outcomes in Cystic Fibrosis

(2015) Anne G. Hoen et al.   JOURNAL OF PEDIATRICS

Minimally Invasive Sampling Method Identifies Differences in Taxonomic Richness of Nasal Microbiomes in Young Infants Associated with Mode of Delivery

(2015) Meghan H. Shilts et al.   MICROBIAL ECOLOGY

Cystic fibrosis lung microbiome: Opportunities to reconsider management of airway infection

(2015) Lindsay J. Caverly et al.   PEDIATRIC PULMONOLOGY

The Lung Microbiome: New Principles for Respiratory Bacteriology in Health and Disease

(2015) Robert P. Dickson et al.   PLoS Pathogens

Deriving accurate microbiota profiles from human samples with low bacterial content through post-sequencing processing of Illumina MiSeq data

(2015) Jake Jervis-Bardy et al.   Microbiome

The daily dynamics of cystic fibrosis airway microbiota during clinical stability and at exacerbation

(2015) Lisa A Carmody et al.   Microbiome

Insights into the respiratory tract microbiota of patients with cystic fibrosis during early Pseudomonas aeruginosa colonization

(2015) Marlène Keravec et al.   SpringerPlus

Comparison of Microbiomes from Different Niches of Upper and Lower Airways in Children and Adolescents with Cystic Fibrosis

(2015) Sébastien Boutin et al.   PLoS One

Impact of the CFTR-Potentiator Ivacaftor on Airway Microbiota in Cystic Fibrosis Patients Carrying A G551D Mutation

(2015) Cédric Bernarde et al.   PLoS One

Lung microbiota across age and disease stage in cystic fibrosis

(2015) Bryan Coburn et al.   Scientific Reports

Early Respiratory Microbiota Composition Determines Bacterial Succession Patterns and Respiratory Health in Children

(2014) Giske Biesbroek et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Early Respiratory Infection Is Associated with Reduced Spirometry in Children with Cystic Fibrosis

(2014) Kathryn A. Ramsey et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Aspirated bile: a major host trigger modulating respiratory pathogen colonisation in cystic fibrosis patients

(2014) F. J. Reen et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Pyrosequencing reveals transient cystic fibrosis lung microbiome changes with intravenous antibiotics

(2014) D. J. Smith et al.   EUROPEAN RESPIRATORY JOURNAL

Analysis of Changes in Diversity and Abundance of the Microbial Community in a Cystic Fibrosis Patient over a Multiyear Period

(2014) Joshua R. Stokell et al.   JOURNAL OF CLINICAL MICROBIOLOGY

The role of the microbiome in exacerbations of chronic lung diseases

(2014) Robert P Dickson et al.   LANCET

The Microbial Community of the Cystic Fibrosis Airway Is Disrupted in Early Life

(2014) Julie Renwick et al.   PLoS One

Biogeochemical Forces Shape the Composition and Physiology of Polymicrobial Communities in the Cystic Fibrosis Lung

(2014) R. A. Quinn et al.   mBio

The microbiome in pediatric cystic fibrosis patients: the role of shared environment suggests a window of intervention

(2014) Thomas H Hampton et al.   Microbiome

Increased Risk of Pneumonia and Bronchiolitis after Bacterial Colonization of the Airways as Neonates

(2013) Nadja H. Vissing et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Molecular analysis of changes in Pseudomonas aeruginosa load during treatment of a pulmonary exacerbation in cystic fibrosis

(2013) D.W. Reid et al.   Journal of Cystic Fibrosis

Risk Factors for Bronchiectasis in Children with Cystic Fibrosis

(2013) Peter D. Sly et al.   NEW ENGLAND JOURNAL OF MEDICINE

Increased rate of lung function decline in Australian adolescents with cystic fibrosis

(2013) Liam Welsh et al.   PEDIATRIC PULMONOLOGY

Inflammation and Airway Microbiota during Cystic Fibrosis Pulmonary Exacerbations

(2013) Edith T. Zemanick et al.   PLoS One

Microbiota and Metabolite Profiling Reveal Specific Alterations in Bacterial Community Structure and Environment in the Cystic Fibrosis Airway during Exacerbation

(2013) Kate B. Twomey et al.   PLoS One

Unique microbial communities persist in individual cystic fibrosis patients throughout a clinical exacerbation

(2013) Katherine E Price et al.   Microbiome

Prevalence of Streptococci and Increased Polymicrobial Diversity Associated with Cystic Fibrosis Patient Stability

(2012) L. M. Filkins et al.   JOURNAL OF BACTERIOLOGY

Regulation of bacterial trafficking in the nasopharynx

(2012) Stephen I. Pelton   Paediatric Respiratory Reviews

The Human Microbiome and Its Potential Importance to Pediatrics

(2012) C. L. Johnson et al.   PEDIATRICS

The Airway Microbiota in Cystic Fibrosis: A Complex Fungal and Bacterial Community—Implications for Therapeutic Management

(2012) Laurence Delhaes et al.   PLoS One

Comparison of DNA Extraction Methods for Microbial Community Profiling with an Application to Pediatric Bronchoalveolar Lavage Samples

(2012) Dana Willner et al.   PLoS One

The Adult Cystic Fibrosis Airway Microbiota Is Stable over Time and Infection Type, and Highly Resilient to Antibiotic Treatment of Exacerbations

(2012) Anthony A. Fodor et al.   PLoS One

Direct sampling of cystic fibrosis lungs indicates that DNA-based analyses of upper-airway specimens can misrepresent lung microbiota

(2012) A. F. Goddard et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Decade-long bacterial community dynamics in cystic fibrosis airways

(2012) J. Zhao et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Long-term cultivation-independent microbial diversity analysis demonstrates that bacterial communities infecting the adult cystic fibrosis lung show stability and resilience

(2012) Franziska Anne Stressmann et al.   THORAX

Serial Analysis of the Gut and Respiratory Microbiome in Cystic Fibrosis in Infancy: Interaction between Intestinal and Respiratory Tracts and Impact of Nutritional Exposures

(2012) J. C. Madan et al.   mBio

Infection, Inflammation, and Lung Function Decline in Infants with Cystic Fibrosis

(2011) Naveen Pillarisetti et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Inflammatory Responses to Individual Microorganisms in the Lungs of Children With Cystic Fibrosis

(2011) C. Gangell et al.   CLINICAL INFECTIOUS DISEASES

True Microbiota Involved in Chronic Lung Infection of Cystic Fibrosis Patients Found by Culturing and 16S rRNA Gene Analysis

(2011) V. B. Rudkjobing et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Relationship between cystic fibrosis respiratory tract bacterial communities and age, genotype, antibiotics and Pseudomonas aeruginosa

(2010) Vanja Klepac-Ceraj et al.   ENVIRONMENTAL MICROBIOLOGY

Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis

(2010) Adam M Guss et al.   ISME Journal

Airway Microbiota and Pathogen Abundance in Age-Stratified Cystic Fibrosis Patients

(2010) Michael J. Cox et al.   PLoS One

Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns

(2010) M. G. Dominguez-Bello et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Lung Disease at Diagnosis in Infants with Cystic Fibrosis Detected by Newborn Screening

(2009) Peter D. Sly et al.   AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE

Antibiotic-resistant obligate anaerobes during exacerbations of cystic fibrosis patients

(2009) D. Worlitzsch et al.   CLINICAL MICROBIOLOGY AND INFECTION

Metagenomic Analysis of Respiratory Tract DNA Viral Communities in Cystic Fibrosis and Non-Cystic Fibrosis Individuals

(2009) Dana Willner et al.   PLoS One

A polymicrobial perspective of pulmonary infections exposes an enigmatic pathogen in cystic fibrosis patients

(2008) C. D. Sibley et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA