Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation
Published 2017 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Site-specific mapping of the human SUMO proteome reveals co-modification with phosphorylation
Authors
Keywords
-
Journal
NATURE STRUCTURAL & MOLECULAR BIOLOGY
Volume 24, Issue 3, Pages 325-336
Publisher
Springer Nature
Online
2017-01-24
DOI
10.1038/nsmb.3366
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- The increasing complexity of the ubiquitin code
- (2016) Richard Yau et al. NATURE CELL BIOLOGY
- The Perseus computational platform for comprehensive analysis of (prote)omics data
- (2016) Stefka Tyanova et al. NATURE METHODS
- A high-yield double-purification proteomics strategy for the identification of SUMO sites
- (2016) Ivo A Hendriks et al. Nature Protocols
- A comprehensive compilation of SUMO proteomics
- (2016) Ivo A. Hendriks et al. NATURE REVIEWS MOLECULAR CELL BIOLOGY
- Proteome-wide analysis of arginine monomethylation reveals widespread occurrence in human cells
- (2016) Sara C. Larsen et al. Science Signaling
- Proteome-wide identification of the endogenous ADP-ribosylome of mammalian cells and tissue
- (2016) Rita Martello et al. Nature Communications
- Proteome-wide analysis of arginine monomethylation reveals widespread occurrence in human cells
- (2016) Sara C. Larsen et al. Science Signaling
- Spatiotemporal regulation of posttranslational modifications in the DNA damage response
- (2015) N. P. Dantuma et al. EMBO JOURNAL
- Mapping the SUMOylated landscape
- (2015) Karolin Eifler et al. FEBS Journal
- System-wide Analysis of SUMOylation Dynamics in Response to Replication Stress Reveals Novel Small Ubiquitin-like Modified Target Proteins and Acceptor Lysines Relevant for Genome Stability
- (2015) Zhenyu Xiao et al. MOLECULAR & CELLULAR PROTEOMICS
- SUMOylation-Mediated Regulation of Cell Cycle Progression and Cancer
- (2015) Karolin Eifler et al. TRENDS IN BIOCHEMICAL SCIENCES
- Sumo and the cellular stress response
- (2015) Jorrit M. Enserink Cell Division
- System-wide identification of wild-type SUMO-2 conjugation sites
- (2015) Ivo A. Hendriks et al. Nature Communications
- SUMO-2 Orchestrates Chromatin Modifiers in Response to DNA Damage
- (2015) Ivo A. Hendriks et al. Cell Reports
- SSpro/ACCpro 5: almost perfect prediction of protein secondary structure and relative solvent accessibility using profiles, machine learning and structural similarity
- (2014) C. N. Magnan et al. BIOINFORMATICS
- Predicting sumoylation sites using support vector machines based on various sequence features, conformational flexibility and disorder
- (2014) Ahmet Yavuz et al. BMC GENOMICS
- SUMO2 is essential while SUMO3 is dispensable for mouse embryonic development
- (2014) L. Wang et al. EMBO REPORTS
- Off-Line High-pH Reversed-Phase Fractionation for In-Depth Phosphoproteomics
- (2014) Tanveer S. Batth et al. JOURNAL OF PROTEOME RESEARCH
- Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ
- (2014) Jürgen Cox et al. MOLECULAR & CELLULAR PROTEOMICS
- Uncovering SUMOylation Dynamics during Cell-Cycle Progression Reveals FoxM1 as a Key Mitotic SUMO Target Protein
- (2014) Joost Schimmel et al. MOLECULAR CELL
- ProteomeXchange provides globally coordinated proteomics data submission and dissemination
- (2014) Juan A Vizcaíno et al. NATURE BIOTECHNOLOGY
- KinomeXplorer: an integrated platform for kinome biology studies
- (2014) Heiko Horn et al. NATURE METHODS
- Uncovering global SUMOylation signaling networks in a site-specific manner
- (2014) Ivo A Hendriks et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- PhosphoSitePlus, 2014: mutations, PTMs and recalibrations
- (2014) Peter V. Hornbeck et al. NUCLEIC ACIDS RESEARCH
- Mapping of SUMO sites and analysis of SUMOylation changes induced by external stimuli
- (2014) F. Impens et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Proteome-Wide Identification of SUMO2 Modification Sites
- (2014) T. Tammsalu et al. Science Signaling
- Large-scale analysis of lysine SUMOylation by SUMO remnant immunoaffinity profiling
- (2014) Frédéric Lamoliatte et al. Nature Communications
- PolyUbiquitin Chain Linkage Topology Selects the Functions from the Underlying Binding Landscape
- (2014) Yong Wang et al. PLoS Computational Biology
- PML nuclear bodies: Assembly and oxidative stress-sensitive sumoylation
- (2014) Umut Sahin et al. Nucleus
- Sumoylation: A Regulatory Protein Modification in Health and Disease
- (2013) Annette Flotho et al. Annual Review of Biochemistry
- When ubiquitination meets phosphorylation: a systems biology perspective of EGFR/MAPK signalling
- (2013) Lan K Nguyen et al. Cell Communication and Signaling
- The Coming Age of Complete, Accurate, and Ubiquitous Proteomes
- (2013) Matthias Mann et al. MOLECULAR CELL
- Detecting endogenous SUMO targets in mammalian cells and tissues
- (2013) Janina Becker et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Phosphorylation Variation during the Cell Cycle Scales with Structural Propensities of Proteins
- (2013) Stefka Tyanova et al. PLoS Computational Biology
- Protein Group Modification and Synergy in the SUMO Pathway as Exemplified in DNA Repair
- (2012) Ivan Psakhye et al. CELL
- Identification of Estrogen Receptor as a SUMO-1 Target Reveals a Novel Phosphorylated Sumoylation Motif and Regulation by Glycogen Synthase Kinase 3
- (2012) N. Picard et al. MOLECULAR AND CELLULAR BIOLOGY
- Ubiquitin chain conformation regulates recognition and activity of interacting proteins
- (2012) Yu Ye et al. NATURE
- Quantitative maps of protein phosphorylation sites across 14 different rat organs and tissues
- (2012) Alicia Lundby et al. Nature Communications
- Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment
- (2011) Jürgen Cox et al. JOURNAL OF PROTEOME RESEARCH
- Systematic and Quantitative Assessment of the Ubiquitin-Modified Proteome
- (2011) Woong Kim et al. MOLECULAR CELL
- Deep proteome and transcriptome mapping of a human cancer cell line
- (2011) N. Nagaraj et al. Molecular Systems Biology
- SUMO chains: polymeric signals: Figure 1
- (2010) Alfred C.O. Vertegaal BIOCHEMICAL SOCIETY TRANSACTIONS
- Precision Mapping of an In Vivo N-Glycoproteome Reveals Rigid Topological and Sequence Constraints
- (2010) Dorota F. Zielinska et al. CELL
- Mass Spectrometric Analysis of Lysine Ubiquitylation Reveals Promiscuity at Site Level
- (2010) Jannie M. R. Danielsen et al. MOLECULAR & CELLULAR PROTEOMICS
- Site-Specific Identification of SUMO-2 Targets in Cells Reveals an Inverted SUMOylation Motif and a Hydrophobic Cluster SUMOylation Motif
- (2010) Ivan Matic et al. MOLECULAR CELL
- Quantitative Phosphoproteomics Reveals Widespread Full Phosphorylation Site Occupancy During Mitosis
- (2010) J. V. Olsen et al. Science Signaling
- Improved visualization of protein consensus sequences by iceLogo
- (2009) Niklaas Colaert et al. NATURE METHODS
- Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions
- (2009) C. Choudhary et al. SCIENCE
- System-Wide Changes to SUMO Modifications in Response to Heat Shock
- (2009) F. Golebiowski et al. Science Signaling
- Regulation of Cyclin D1 RNA Stability by SNIP1
- (2008) C. P. Bracken et al. CANCER RESEARCH
- The Fast-Growing Business of SUMO Chains
- (2008) Helle D. Ulrich MOLECULAR CELL
- MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
- (2008) Jürgen Cox et al. NATURE BIOTECHNOLOGY
- RNF4 is a poly-SUMO-specific E3 ubiquitin ligase required for arsenic-induced PML degradation
- (2008) Michael H. Tatham et al. NATURE CELL BIOLOGY
- Arsenic degrades PML or PML–RARα through a SUMO-triggered RNF4/ubiquitin-mediated pathway
- (2008) Valérie Lallemand-Breitenbach et al. NATURE CELL BIOLOGY
Create your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started