Guidelines and quantitative standards to improve consistency in cetacean subspecies and species delimitation relying on molecular genetic data

Diagnosability of mtDNA with Random Forests: Using sequence data to delimit subspecies

(2017) Frederick I. Archer et al.   MARINE MAMMAL SCIENCE

A review of molecular genetic markers and analytical approaches that have been used for delimiting marine mammal subspecies and species

(2017) Patricia E. Rosel et al.   MARINE MAMMAL SCIENCE

Examining metrics and magnitudes of molecular genetic differentiation used to delimit cetacean subspecies based on mitochondrial DNA control region sequences

(2017) Patricia E. Rosel et al.   MARINE MAMMAL SCIENCE

Analytical approaches to subspecies delimitation with genetic data

(2017) Karen K. Martien et al.   MARINE MAMMAL SCIENCE

Why we should develop guidelines and quantitative standards for using genetic data to delimit subspecies for data-poor organisms like cetaceans

(2017) Barbara L. Taylor et al.   MARINE MAMMAL SCIENCE

Nuclear and Mitochondrial Patterns of Population Structure in North Pacific False Killer Whales (Pseudorca crassidens)

(2014) K. K. Martien et al.   JOURNAL OF HEREDITY

Spatio-Temporal Patterns of Beaked Whale Echolocation Signals in the North Pacific

(2014) Simone Baumann-Pickering et al.   PLoS One

The evolving male: spinner dolphin (Stenella longirostris) ecotypes are divergent at Y chromosome but not mtDNA or autosomal markers

(2013) Kimberly R. Andrews et al.   MOLECULAR ECOLOGY

Genotyping-by-sequencing in ecological and conservation genomics

(2013) Shawn R. Narum et al.   MOLECULAR ECOLOGY

How to fail at species delimitation

(2013) Bryan C. Carstens et al.   MOLECULAR ECOLOGY

Targeted multiplex next-generation sequencing: advances in techniques of mitochondrial and nuclear DNA sequencing for population genomics

(2013) Brittany L. Hancock-Hanser et al.   Molecular Ecology Resources

Applicability of RAD-tag genotyping for interfamilial comparisons: empirical data from two cetaceans

(2013) Amélia Viricel et al.   Molecular Ecology Resources

RESTseq – Efficient Benchtop Population Genomics with RESTriction Fragment SEQuencing

(2013) Eckart Stolle et al.   PLoS One

Mitogenomic Phylogenetics of Fin Whales (Balaenoptera physalus spp.): Genetic Evidence for Revision of Subspecies

(2013) Frederick I. Archer et al.   PLoS One

Inferring Species Trees Directly from Biallelic Genetic Markers: Bypassing Gene Trees in a Full Coalescent Analysis

(2012) David Bryant et al.   MOLECULAR BIOLOGY AND EVOLUTION

Estimates of Genetic Differentiation Measured by FST Do Not Necessarily Require Large Sample Sizes When Using Many SNP Markers

(2012) Eva-Maria Willing et al.   PLoS One

Sampling for Microsatellite-Based Population Genetic Studies: 25 to 30 Individuals per Population Is Enough to Accurately Estimate Allele Frequencies

(2012) Marie L. Hale et al.   PLoS One

Anchored Hybrid Enrichment for Massively High-Throughput Phylogenomics

(2012) Alan R. Lemmon et al.   SYSTEMATIC BIOLOGY

Amendment of Articles 8, 9, 10, 21 and 78 of the International Code of Zoological Nomenclature to expand and refine methods of publication

(2012)   ZooKeys

Empirical comparison of single nucleotide polymorphisms and microsatellites for population and demographic analyses of bowhead whales

(2012) PA Morin et al.   Endangered Species Research

Can Genetic Differences Explain Vocal Dialect Variation in Sperm Whales, Physeter macrocephalus?

(2011) Luke Rendell et al.   BEHAVIOR GENETICS

Mitogenomic phylogenetic analyses of the Delphinidae with an emphasis on the Globicephalinae

(2011) Julia T Vilstrup et al.   BMC EVOLUTIONARY BIOLOGY

Single-nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms

(2011) J. E. SEEB et al.   Molecular Ecology Resources

Effects of sample size, number of markers, and allelic richness on the detection of spatial genetic pattern

(2011) ERIN L. LANDGUTH et al.   Molecular Ecology Resources

Out of the Pacific and Back Again: Insights into the Matrilineal History of Pacific Killer Whale Ecotypes

(2011) Andrew D. Foote et al.   PLoS One

Mitogenome Phylogenetics: The Impact of Using Single Regions and Partitioning Schemes on Topology, Substitution Rate and Divergence Time Estimation

(2011) Sebastián Duchêne et al.   PLoS One

Determining Species Boundaries in a World Full of Rarity: Singletons, Species Delimitation Methods

(2011) Gwynne S. Lim et al.   SYSTEMATIC BIOLOGY

Complete mitochondrial genome phylogeographic analysis of killer whales (Orcinus orca) indicates multiple species

(2010) P. A. Morin et al.   GENOME RESEARCH

Quantitative criteria for species delimitation

(2010) JOSEPH A. TOBIAS et al.   IBIS

Chapter 3: Null Expectations in Subspecies Diagnosis

(2010) Michael A. Patten   ORNITHOLOGICAL MONOGRAPHS

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

(2010) Paul A. Hohenlohe et al.   PLoS Genetics

Applied Conservation Genetics and the Need for Quality Control and Reporting of Genetic Data Used in Fisheries and Wildlife Management

(2009) P. A. Morin et al.   JOURNAL OF HEREDITY

Assessing statistical power of SNPs for population structure and conservation studies

(2009) PHILLIP A. MORIN et al.   Molecular Ecology Resources

The quest for Y-chromosomal markers - methodological strategies for mammalian non-model organisms

(2009) MAJA P. GREMINGER et al.   Molecular Ecology Resources

On the relationship between population differentiation and sampling effort: is more always better?

(2009) Mats Björklund et al.   OIKOS

How many extant pinniped species remain to be described?

(2009) Michael A. Woodley et al.   HISTORICAL BIOLOGY

A GENEALOGICAL APPROACH TO QUANTIFYING LINEAGE DIVERGENCE

(2008) Michael P. Cummings et al.   EVOLUTION

Detecting recent speciation events: the case of the finless porpoise (genus Neophocaena)

(2008) J Y Wang et al.   HEREDITY

The effects of sample size on population genetic diversity estimates in song sparrows Melospiza melodia

(2008) Christin L. Pruett et al.   JOURNAL OF AVIAN BIOLOGY

How few whales were there after whaling? Inference from contemporary mtDNA diversity

(2007) J. A. JACKSON et al.   MOLECULAR ECOLOGY

Estimating allelic richness: Effects of sample size and bottlenecks

(2003) P. L. Leberg   MOLECULAR ECOLOGY