Single-nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms

Development of 54 novel single-nucleotide polymorphism (SNP) assays for sockeye and coho salmon and assessment of available SNPs to differentiate stocks within the Columbia River

(2011) NATHAN R. CAMPBELL et al.   Molecular Ecology Resources

Detecting signatures of positive selection in partial sequences generated on a large scale: pitfalls, procedures and resources

(2011) MARINE S. O. BRIEUC et al.   Molecular Ecology Resources

Identification of single nucleotide polymorphisms in candidate genes for growth and reproduction in a nonmodel organism; the Atlantic cod,Gadus morhua

(2011) JAKOB HEMMER-HANSEN et al.   Molecular Ecology Resources

Inbreeding effective population size and parentage analysis without parents

(2011) ROBIN S. WAPLES et al.   Molecular Ecology Resources

A simple route to single-nucleotide polymorphisms in a nonmodel species: identification and characterization of SNPs in the Artic ringed seal (Pusa hispida hispida)

(2011) MORTEN TANGE OLSEN et al.   Molecular Ecology Resources

Assembling a dual purpose TaqMan-based panel of single-nucleotide polymorphism markers in rainbow trout and steelhead (Oncorhynchus mykiss) for association mapping and population genetics analysis

(2011) METTE H. H. HANSEN et al.   Molecular Ecology Resources

Discovery and characterization of single nucleotide polymorphisms in Chinook salmon,Oncorhynchus tshawytscha

(2011) A. J. CLEMENTO et al.   Molecular Ecology Resources

Discovery and characterization of single-nucleotide polymorphisms in steelhead/rainbow trout,Oncorhynchus mykiss

(2011) ALICIA ABADÍA-CARDOSO et al.   Molecular Ecology Resources

Short reads and nonmodel species: exploring the complexities of next-generation sequence assembly and SNP discovery in the absence of a reference genome

(2011) M. V. EVERETT et al.   Molecular Ecology Resources

Unlocking the potential of genomic technologies for wildlife forensics

(2011) ROB OGDEN   Molecular Ecology Resources

SNP discovery in black cottonwood (Populus trichocarpa) by population transcriptome resequencing

(2011) ARMANDO GERALDES et al.   Molecular Ecology Resources

Comparison of SNPs and microsatellites for fine-scale application of genetic stock identification of Chinook salmon in the Columbia River Basin

(2011) J. E. HESS et al.   Molecular Ecology Resources

An empirical comparison of SNPs and microsatellites for parentage and kinship assignment in a wild sockeye salmon (Oncorhynchus nerka) population

(2011) LORENZ HAUSER et al.   Molecular Ecology Resources

Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges

(2011) S. J. HELYAR et al.   Molecular Ecology Resources

Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout

(2011) PAUL A. HOHENLOHE et al.   Molecular Ecology Resources

Next Generation Molecular Ecology

(2010) DIETHARD TAUTZ et al.   MOLECULAR ECOLOGY

Using blocks of linked single nucleotide polymorphisms as highly polymorphic genetic markers for parentage analysis

(2010) BEATRIX JONES et al.   Molecular Ecology Resources

Strong correlation between cross-amplification success and genetic distance across all members of ‘True Salamanders’ (Amphibia: Salamandridae) revealed by Salamandra salamandra-specific microsatellite loci

(2010) RALF HENDRIX et al.   Molecular Ecology Resources

Cross-amplification of microsatellites from the codling moth Cydia pomonella to three other species of the tribe Grapholitini (Lepidoptera: Tortricidae)

(2010) M. H. CHEN et al.   Molecular Ecology Resources

Application of single nucleotide polymorphisms to non-model species: a technical review

(2010) M. R. GARVIN et al.   Molecular Ecology Resources

Genomics and the future of conservation genetics

(2010) Fred W. Allendorf et al.   NATURE REVIEWS GENETICS

Resolving postglacial phylogeography using high-throughput sequencing

(2010) K. J. Emerson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

To Fight Illegal Fishing, Forensic DNA Gets Local

(2010) E. Stokstad   SCIENCE

Summer–Fall Distribution of Stocks of Immature Sockeye Salmon in the Bering Sea as Revealed by Single-Nucleotide Polymorphisms

(2010) C. Habicht et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY

Population Genomics of Parallel Adaptation in Threespine Stickleback using Sequenced RAD Tags

(2010) Paul A. Hohenlohe et al.   PLoS Genetics

Detecting loci under selection in a hierarchically structured population

(2009) L Excoffier et al.   HEREDITY

Applied Conservation Genetics and the Need for Quality Control and Reporting of Genetic Data Used in Fisheries and Wildlife Management

(2009) P. A. Morin et al.   JOURNAL OF HEREDITY

Comparative Performance of Single Nucleotide Polymorphism and Microsatellite Markers for Population Genetic Analysis

(2009) Brad S. Coates et al.   JOURNAL OF HEREDITY

Assessing statistical power of SNPs for population structure and conservation studies

(2009) PHILLIP A. MORIN et al.   Molecular Ecology Resources

Gene mapping in the wild with SNPs: guidelines and future directions

(2008) Jon Slate et al.   GENETICA

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS

Rapid SNP Discovery and Genetic Mapping Using Sequenced RAD Markers

(2008) Nathan A. Baird et al.   PLoS One

Number of Alleles as a Predictor of the Relative Assignment Accuracy of Short Tandem Repeat (STR) and Single-Nucleotide-Polymorphism (SNP) Baselines for Chum Salmon

(2008) Christian T. Smith et al.   TRANSACTIONS OF THE AMERICAN FISHERIES SOCIETY