Shotgun metagenomics indicates novel family A DNA polymerases predominate within marine virioplankton
Published 2013 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Shotgun metagenomics indicates novel family A DNA polymerases predominate within marine virioplankton
Authors
Keywords
-
Journal
ISME Journal
Volume 8, Issue 1, Pages 103-114
Publisher
Springer Nature
Online
2013-08-29
DOI
10.1038/ismej.2013.124
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Evaluation of Two Approaches for Assessing the Genetic Similarity of Virioplankton Populations as Defined by Genome Size
- (2012) Sanchita Jamindar et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Towards quantitative metagenomics of wild viruses and other ultra-low concentration DNA samples: a rigorous assessment and optimization of the linker amplification method
- (2012) Melissa B. Duhaime et al. ENVIRONMENTAL MICROBIOLOGY
- The P-SSP7 Cyanophage Has a Linear Genome with Direct Terminal Repeats
- (2012) Gazalah Sabehi et al. PLoS One
- A novel lineage of myoviruses infecting cyanobacteria is widespread in the oceans
- (2012) G. Sabehi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- VIROME: a standard operating procedure for analysis of viral metagenome sequences
- (2012) K. Eric Wommack et al. Standards in Genomic Sciences
- Metagenomic analysis of a complex marine planktonic thaumarchaeal community from the Gulf of Maine
- (2011) Benjamin J. Tully et al. ENVIRONMENTAL MICROBIOLOGY
- Phylodynamics and movement of Phycodnaviruses among aquatic environments
- (2011) Manuela V Gimenes et al. ISME Journal
- Discovery of Cyanophage Genomes Which Contain Mitochondrial DNA Polymerase
- (2011) Yi-Wah Chan et al. MOLECULAR BIOLOGY AND EVOLUTION
- Repeating patterns of virioplankton production within an estuarine ecosystem
- (2011) D. M. Winget et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Hydroxyapatite-Mediated Separation of Double-Stranded DNA, Single-Stranded DNA, and RNA Genomes from Natural Viral Assemblages
- (2010) C. Andrews-Pfannkoch et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Ubiquitous cyanobacterial podoviruses in the global oceans unveiled through viral DNA polymerase gene sequences
- (2010) Sijun Huang et al. ISME Journal
- Diversity and distribution of single-stranded DNA phages in the North Atlantic Ocean
- (2010) Kimberly P Tucker et al. ISME Journal
- CDD: a Conserved Domain Database for the functional annotation of proteins
- (2010) A. Marchler-Bauer et al. NUCLEIC ACIDS RESEARCH
- A simple and efficient method for concentration of ocean viruses by chemical flocculation
- (2010) Seth G. John et al. Environmental Microbiology Reports
- Phylogenetic Analysis Indicates Evolutionary Diversity and Environmental Segregation of Marine Podovirus DNA Polymerase Gene Sequences
- (2009) J. M. Labonte et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Phylogenetic Diversity of Sequences of Cyanophage Photosynthetic Gene psbA in Marine and Freshwaters
- (2008) C. Chenard et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Metagenomics: Read Length Matters
- (2008) K. E. Wommack et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Amplification of Uncultured Single-Stranded DNA Viruses from Rice Paddy Soil
- (2008) K.-H. Kim et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- MetaGeneAnnotator: Detecting Species-Specific Patterns of Ribosomal Binding Site for Precise Gene Prediction in Anonymous Prokaryotic and Phage Genomes
- (2008) H. Noguchi et al. DNA RESEARCH
- Portal protein diversity and phage ecology
- (2008) Matthew B. Sullivan et al. ENVIRONMENTAL MICROBIOLOGY
- Rates of evolutionary change in viruses: patterns and determinants
- (2008) Siobain Duffy et al. NATURE REVIEWS GENETICS
- CDD: specific functional annotation with the Conserved Domain Database
- (2008) A. Marchler-Bauer et al. NUCLEIC ACIDS RESEARCH
- The SWISS-MODEL Repository and associated resources
- (2008) F. Kiefer et al. NUCLEIC ACIDS RESEARCH
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowCreate your own webinar
Interested in hosting your own webinar? Check the schedule and propose your idea to the Peeref Content Team.
Create Now