The Evolution of Sex Chromosomes and Dosage Compensation in Plants

Pathways for making unisexual flowers and unisexual plants:Moving beyond the “two mutations linked on one chromosome” model

(2016) Susanne S. Renner   AMERICAN JOURNAL OF BOTANY

Plant Sex Chromosomes

(2016) Deborah Charlesworth   Annual Review of Plant Biology

SEX-DETector: A Probabilistic Approach to Study Sex Chromosomes in Non-Model Organisms

(2016) Aline Muyle et al.   Genome Biology and Evolution

Confirmation of Single-Locus Sex Determination and Female Heterogamety in Willow Based on Linkage Analysis

(2016) Yingnan Chen et al.   PLoS One

A new physical mapping approach refines the sex-determining gene positions on the Silene latifolia Y-chromosome

(2016) Yusuke Kazama et al.   Scientific Reports

Fully automated pipeline for detection of sex linked genes using RNA-Seq data

(2015) Monika Michalovova et al.   BMC BIOINFORMATICS

Plant Sex Chromosomes: Lost Genes with Little Compensation

(2015) Melissa Toups et al.   CURRENT BIOLOGY

Origin and domestication of papaya Yhchromosome

(2015) Robert VanBuren et al.   GENOME RESEARCH

Plant contributions to our understanding of sex chromosome evolution

(2015) Deborah Charlesworth   NEW PHYTOLOGIST

Rapid Y degeneration and dosage compensation in plant sex chromosomes

(2015) Alexander S. T. Papadopulos et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A cucurbit androecy gene reveals how unisexual flowers develop and dioecy emerges

(2015) A. Boualem et al.   SCIENCE

Ancestral traits and specializations in the flowers of the basal grade of living angiosperms

(2015) Peter K. Endress et al.   TAXON

X chromosome inactivation and active X upregulation in therian mammals: facts, questions, and hypotheses

(2015) R. A. Veitia et al.   Journal of Molecular Cell Biology

Evolution of dosage compensation under sexual selection differs between X and Z chromosomes

(2015) Charles Mullon et al.   Nature Communications

The Constrained Maximal Expression Level Owing to Haploidy Shapes Gene Content on the Mammalian X Chromosome

(2015) Laurence D. Hurst et al.   PLOS BIOLOGY

Different autosomes evolved into sex chromosomes in the sister genera of Salix and Populus

(2015) Jing Hou et al.   Scientific Reports

The relative and absolute frequencies of angiosperm sexual systems: Dioecy, monoecy, gynodioecy, and an updated online database

(2014) Susanne S. Renner   AMERICAN JOURNAL OF BOTANY

A first genetic map of date palm (Phoenix dactylifera) reveals long-range genome structure conservation in the palms

(2014) Lisa S Mathew et al.   BMC GENOMICS

A small XY chromosomal region explains sex determination in wild dioecious V. vinifera and the reversal to hermaphroditism in domesticated grapevines

(2014) Sandrine Picq et al.   BMC PLANT BIOLOGY

The willow genome and divergent evolution from poplar after the common genome duplication

(2014) Xiaogang Dai et al.   CELL RESEARCH

A Haploid System of Sex Determination in the Brown Alga Ectocarpus sp.

(2014) Sophia Ahmed et al.   CURRENT BIOLOGY

Sex-Biased Gene Expression and Evolution of the X Chromosome in Nematodes

(2014) S. E. Albritton et al.   GENETICS

Using next-generation RNA sequencing to identify imprinted genes

(2014) X Wang et al.   HEREDITY

Dioecy is associated with higher diversification rates in flowering plants

(2014) J. Käfer et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Using genotyping data to assign markers to their chromosome type and to infer the sex of individuals: a Bayesian model-based classifier

(2014) Mathieu Gautier   Molecular Ecology Resources

Origins and functional evolution of Y chromosomes across mammals

(2014) Diego Cortez et al.   NATURE

Genetic degeneration of old and young Y chromosomes in the flowering plant Rumex hastatulus

(2014) J. Hough et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Y-chromosome-encoded small RNA acts as a sex determinant in persimmons

(2014) T. Akagi et al.   SCIENCE

Evolution of Sexes from an Ancestral Mating-Type Specification Pathway

(2014) Sa Geng et al.   PLOS BIOLOGY

Sex-Chromosome Turnovers: The Hot-Potato Model

(2013) Olivier Blaser et al.   AMERICAN NATURALIST

Sex-biased gene expression in the brown alga Fucus vesiculosus

(2013) Maria João F Martins et al.   BMC GENOMICS

The evolution of X chromosome inactivation in mammals: the demise of Ohno’s hypothesis?

(2013) Eugénie Pessia et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

EVOLUTION OF SEX DETERMINATION SYSTEMS WITH HETEROGAMETIC MALES AND FEMALES INSILENE

(2013) Veronika Slancarova et al.   EVOLUTION

Expansion of the Pseudo-autosomal Region and Ongoing Recombination Suppression in the Silene latifolia Sex Chromosomes

(2013) R. Bergero et al.   GENETICS

Testing for the Footprint of Sexually Antagonistic Polymorphisms in the Pseudoautosomal Region of a Plant Sex Chromosome Pair

(2013) S. Qiu et al.   GENETICS

Contrasting Patterns of Transposable Element and Satellite Distribution on Sex Chromosomes (XY1Y2) in the Dioecious Plant Rumex acetosa

(2013) Pavlina Steflova et al.   Genome Biology and Evolution

Efficient identification of Y chromosome sequences in the human andDrosophilagenomes

(2013) Antonio Bernardo Carvalho et al.   GENOME RESEARCH

Y-chromosome evolution: emerging insights into processes of Y-chromosome degeneration

(2013) Doris Bachtrog   NATURE REVIEWS GENETICS

Sex-biased gene expression at homomorphic sex chromosomes in emus and its implication for sex chromosome evolution

(2013) B. Vicoso et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sex chromosome dosage compensation: definitely not for everyone

(2013) Judith E. Mank   TRENDS IN GENETICS

Comparative Sex Chromosome Genomics in Snakes: Differentiation, Evolutionary Strata, and Lack of Global Dosage Compensation

(2013) Beatriz Vicoso et al.   PLOS BIOLOGY

Dosage Compensation of the Sex Chromosomes

(2012) Christine M. Disteche   Annual Review of Genetics

Genomics and Genetics of Human and Primate Y Chromosomes

(2012) Jennifer F. Hughes et al.   Annual Review of Genomics and Human Genetics

Molecular Cytogenetics (FISH, GISH) of Coccinia grandis: A ca. 3 myr-Old Species of Cucurbitaceae with the Largest Y/Autosome Divergence in Flowering Plants

(2012) A. Sousa et al.   CYTOGENETIC AND GENOME RESEARCH

SEX-CHROMOSOME TURNOVERS INDUCED BY DELETERIOUS MUTATION LOAD

(2012) Olivier Blaser et al.   EVOLUTION

Transcriptional profiling analysis in Populus yunnanensis provides insights into molecular mechanisms of sexual differences in salinity tolerance

(2012) Hao Jiang et al.   JOURNAL OF EXPERIMENTAL BOTANY

Sexual dimorphism in flowering plants

(2012) Spencer C.H. Barrett et al.   JOURNAL OF EXPERIMENTAL BOTANY

A dated phylogeny of the papaya family (Caricaceae) reveals the crop’s closest relatives and the family’s biogeographic history

(2012) Fernanda Antunes Carvalho et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Strict evolutionary conservation followed rapid gene loss on human and rhesus Y chromosomes

(2012) Jennifer F. Hughes et al.   NATURE

Male-specific DNA markers provide genetic evidence of an XY chromosome system, a recombination arrest and allow the tracing of paternal lineages in date palm

(2012) Emira Cherif et al.   NEW PHYTOLOGIST

Rapid divergence and expansion of the X chromosome in papaya

(2012) A. R. Gschwend et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sequencing papaya X and Yh chromosomes reveals molecular basis of incipient sex chromosome evolution

(2012) J. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mammalian X chromosome inactivation evolved as a dosage-compensation mechanism for dosage-sensitive genes on the X chromosome

(2012) E. Pessia et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sex-Specific Adaptation Drives Early Sex Chromosome Evolution in Drosophila

(2012) Q. Zhou et al.   SCIENCE

The obscure events contributing to the evolution of an incipient sex chromosome in Populus: a retrospective working hypothesis

(2012) Gerald A. Tuskan et al.   Tree Genetics & Genomes

SlWUS1 ; An X-linked Gene Having No Homologous Y-Linked Copy in Silene latifolia

(2012) Yusuke Kazama et al.   G3-Genes Genomes Genetics

Rapid De Novo Evolution of X Chromosome Dosage Compensation in Silene latifolia, a Plant with Young Sex Chromosomes

(2012) Aline Muyle et al.   PLOS BIOLOGY

Mechanisms and Evolutionary Patterns of Mammalian and Avian Dosage Compensation

(2012) Philippe Julien et al.   PLOS BIOLOGY

Sex Chromosomes in Land Plants

(2011) Ray Ming et al.   Annual Review of Plant Biology

Preservation of the Y Transcriptome in a 10-Million-Year-Old Plant Sex Chromosome System

(2011) Roberta Bergero et al.   CURRENT BIOLOGY

Plant Sex Chromosomes: A Non-Degenerated Y?

(2011) Doris Bachtrog   CURRENT BIOLOGY

Plant Y Chromosome Degeneration Is Retarded by Haploid Purifying Selection

(2011) Margarita V. Chibalina et al.   CURRENT BIOLOGY

THE POTENTIAL FOR SEXUALLY ANTAGONISTIC POLYMORPHISM IN DIFFERENT GENOME REGIONS

(2011) Crispin Y. Jordan et al.   EVOLUTION

Lack of Global Dosage Compensation in Schistosoma mansoni, a Female-Heterogametic Parasite

(2011) Beatriz Vicoso et al.   Genome Biology and Evolution

De novo genome sequencing and comparative genomics of date palm (Phoenix dactylifera)

(2011) Eman K Al-Dous et al.   NATURE BIOTECHNOLOGY

Sex-chromosome evolution: recent progress and the influence of male and female heterogamety

(2011) Hans Ellegren   NATURE REVIEWS GENETICS

Transitions Between Male and Female Heterogamety Caused by Sex-Antagonistic Selection

(2010) G. S. van Doorn et al.   GENETICS

Geographic and phylogenetic patterns in Silene section Melandrium (Caryophyllaceae) as inferred from chloroplast and nuclear DNA sequences

(2010) Anja Rautenberg et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The Ectocarpus genome and the independent evolution of multicellularity in brown algae

(2010) J. Mark Cock et al.   NATURE

Chimpanzee and human Y chromosomes are remarkably divergent in structure and gene content

(2010) Jennifer F. Hughes et al.   NATURE

RNA sequencing shows no dosage compensation of the active X-chromosome

(2010) Yuanyan Xiong et al.   NATURE GENETICS

Evolution of an Expanded Sex-Determining Locus in Volvox

(2010) P. Ferris et al.   SCIENCE

Genomic Analysis of Organismal Complexity in the Multicellular Green Alga Volvox carteri

(2010) S. E. Prochnik et al.   SCIENCE

SEX REVERSAL: A FOUNTAIN OF YOUTH FOR SEX CHROMOSOMES?

(2009) Nicolas Perrin   EVOLUTION

Evolution of Neo-Sex Chromosomes in Silene diclinis

(2009) Elaine C. Howell et al.   GENETICS

Silene as a model system in ecology and evolution

(2009) G Bernasconi et al.   HEREDITY

A transposon-induced epigenetic change leads to sex determination in melon

(2009) Antoine Martin et al.   NATURE

Effective population size and patterns of molecular evolution and variation

(2009) Brian Charlesworth   NATURE REVIEWS GENETICS

A Conserved Ethylene Biosynthesis Enzyme Leads to Andromonoecy in Two Cucumis Species

(2009) Adnane Boualem et al.   PLoS One

Defining Regions and Rearrangements of the Silene latifolia Y Chromosome

(2008) R. Bergero et al.   GENETICS

Genome structure and emerging evidence of an incipient sex chromosome in Populus

(2008) T. Yin et al.   GENOME RESEARCH

Genetic mapping of sex determination in a wild strawberry, Fragaria virginiana, reveals earliest form of sex chromosome

(2008) R B Spigler et al.   HEREDITY

The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)

(2008) Ray Ming et al.   NATURE

Maize Genome Structure Variation: Interplay between Retrotransposon Polymorphisms and Genic Recombination

(2008) H. K. Dooner et al.   PLANT CELL

The evolution of restricted recombination in sex chromosomes

(2008) Roberta Bergero et al.   TRENDS IN ECOLOGY & EVOLUTION

Cloning and expression of genes involved in conidiation and surface properties of Penicillium camemberti grown in liquid and solid cultures

(2007) Khadidja Boualem et al.   RESEARCH IN MICROBIOLOGY