Gene Expression Profiling Reveals Functional Specialization along the Intestinal Tract of a Carnivorous Teleostean Fish (Dicentrarchus labrax)

Lasting effects of butyrate and low FM/FO diets on growth performance, blood haematology/biochemistry and molecular growth-related markers in gilthead sea bream (Sparus aurata)

(2016) Laura Benedito-Palos et al.   AQUACULTURE

Differential responses of the gut transcriptome to plant protein diets in farmed Atlantic salmon

(2016) Elżbieta Król et al.   BMC GENOMICS

Transcriptomic responses in the fish intestine

(2016) Samuel A.M. Martin et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Evaluation of potential candidate genes involved in salinity tolerance in striped catfish ( Pangasianodon hypophthalmus ) using an RNA-Seq approach

(2016) Tuan Viet Nguyen et al.   Marine Genomics

Defining the gene repertoire and spatiotemporal expression profiles of adhesion G protein-coupled receptors in zebrafish

(2015) Breanne L Harty et al.   BMC GENOMICS

Comprehensive biometric, biochemical and histopathological assessment of nutrient deficiencies in gilthead sea bream fed semi-purified diets

(2015) Gabriel F. Ballester-Lozano et al.   BRITISH JOURNAL OF NUTRITION

Intestinal transcriptome analysis revealed differential salinity adaptation between two tilapiine species

(2015) Dana Ronkin et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Nutrigenomic profiling of transcriptional processes affected in liver and distal intestine in response to a soybean meal-induced nutritional stress in Atlantic salmon (Salmo salar)

(2015) Christian De Santis et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

Effects of dietary NEXT ENHANCE®150 on growth performance and expression of immune and intestinal integrity related genes in gilthead sea bream (Sparus aurata L.)

(2015) Jaume Pérez-Sánchez et al.   FISH & SHELLFISH IMMUNOLOGY

Effects of fish oil replacement by vegetable oil blend on digestive enzymes and tissue histomorphology of European sea bass (Dicentrarchus labrax) juveniles

(2015) Carolina Castro et al.   FISH PHYSIOLOGY AND BIOCHEMISTRY

Transcriptome analysis of grass carp (Ctenopharyngodon idella) fed with animal and plant diets

(2015) Ling Li et al.   GENE

Evolutionary History of Cathepsin L (L-like) Family Genes in Vertebrates

(2015) Jin Zhou et al.   International Journal of Biological Sciences

Dynamics of gene expression patterns during early development of the European seabass (Dicentrarchus labrax)

(2015) E. Kaitetzidou et al.   PHYSIOLOGICAL GENOMICS

Wide-targeted gene expression infers tissue-specific molecular signatures of lipid metabolism in fed and fasted fish

(2015) Simona Rimoldi et al.   REVIEWS IN FISH BIOLOGY AND FISHERIES

Fine structure and cellular responses at the host–parasite interface in a range of fish–helminth systems

(2015) B.S. Dezfuli et al.   VETERINARY PARASITOLOGY

Impact of a novel protein meal on the gastrointestinal microbiota and the host transcriptome of larval zebrafish Danio rerio

(2015) Eugene Rurangwa et al.   Frontiers in Physiology

Discovery of osmotic sensitive transcription factors in fish intestine via a transcriptomic approach

(2015) Marty Kwok-Shing Wong et al.   BMC GENOMICS

RNA-seq analysis reveals significant transcriptome changes in turbot (Scophthalmus maximus) suffering severe enteromyxosis

(2015) Diego Robledo et al.   BMC GENOMICS

Unraveling the Molecular Signatures of Oxidative Phosphorylation to Cope with the Nutritionally Changing Metabolic Capabilities of Liver and Muscle Tissues in Farmed Fish

(2015) Azucena Bermejo-Nogales et al.   PLoS One

Effects of dietary microencapsulated sodium butyrate on growth, intestinal mucosal morphology, immune response and adhesive bacteria in juvenile common carp (Cyprinus carpio) pre-fed with or without oxidised oil

(2014) Wenshu Liu et al.   BRITISH JOURNAL OF NUTRITION

T cell transcripts and T cell activities in the gills of the teleost fish sea bass (Dicentrarchus labrax)

(2014) N. Nuñez Ortiz et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Immune parameters in the intestine of wild and reared unvaccinated and vaccinated Atlantic salmon (Salmo salar L.)

(2014) Guro Løkka et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Neuropeptide B Is Female-Specifically Expressed in the Telencephalic and Preoptic Nuclei of the Medaka Brain

(2014) Towako Hiraki et al.   ENDOCRINOLOGY

Interleukin gene expression is strongly modulated at the local level in a fish–parasite model

(2014) Gregorio Pérez-Cordón et al.   FISH & SHELLFISH IMMUNOLOGY

Wide-gene expression analysis of lipid-relevant genes in nutritionally challenged gilthead sea bream (Sparus aurata)

(2014) Laura Benedito-Palos et al.   GENE

Generation and characterization of the sea bass Dicentrarchus labrax brain and liver transcriptomes

(2014) Elodie Magnanou et al.   GENE

Metabolic and transcriptional responses of gilthead sea bream (Sparus aurata L.) to environmental stress: New insights in fish mitochondrial phenotyping

(2014) Azucena Bermejo-Nogales et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Activation of Gpr109a, Receptor for Niacin and the Commensal Metabolite Butyrate, Suppresses Colonic Inflammation and Carcinogenesis

(2014) Nagendra Singh et al.   IMMUNITY

Transcriptional Assessment by Microarray Analysis and Large-Scale Meta-analysis of the Metabolic Capacity of Cardiac and Skeletal Muscle Tissues to Cope With Reduced Nutrient Availability in Gilthead Sea Bream (Sparus aurata L.)

(2014) Josep A. Calduch-Giner et al.   MARINE BIOTECHNOLOGY

Advances in European sea bass genomics and future perspectives

(2014) Bruno Louro et al.   Marine Genomics

RNA-seq profiles from grass carp tissues after reovirus (GCRV) infection based on singular and modular enrichment analyses

(2014) Mijuan Shi et al.   MOLECULAR IMMUNOLOGY

RNA-Seq Technology and Its Application in Fish Transcriptomics

(2014) Xi Qian et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation

(2014) Mbaye Tine et al.   Nature Communications

Deep sequencing for de novo construction of a marine fish (Sparus aurata) transcriptome database with a large coverage of protein-coding transcripts

(2013) Josep A Calduch-Giner et al.   BMC GENOMICS

Analysis of Stress-Responsive Transcriptome in the Intestine of Asian Seabass (Lates calcarifer) using RNA-Seq

(2013) J. H. Xia et al.   DNA RESEARCH

G-protein coupled receptor 18 (GPR18) in channel catfish: Expression analysis and efficacy as immunostimulant against Aeromonas hydrophila infection

(2013) Julia W. Pridgeon et al.   FISH & SHELLFISH IMMUNOLOGY

Medium-chain Fatty Acid-sensing Receptor, GPR84, Is a Proinflammatory Receptor

(2013) Masakatsu Suzuki et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The Orphan Adhesion G Protein-coupled Receptor GPR97 Regulates Migration of Lymphatic Endothelial Cells via the Small GTPases RhoA and Cdc42

(2013) Nadejda Valtcheva et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Mucins as Diagnostic and Prognostic Biomarkers in a Fish-Parasite Model: Transcriptional and Functional Analysis

(2013) Jaume Pérez-Sánchez et al.   PLoS One

A gene expression atlas of the domestic pig

(2012) Tom C Freeman et al.   BMC BIOLOGY

Adhesion GPCRs are widely expressed throughout the subsections of the gastrointestinal tract

(2012) Luca Badiali et al.   BMC GASTROENTEROLOGY

Effects of genotype and dietary fish oil replacement with vegetable oil on the intestinal transcriptome and proteome of Atlantic salmon (Salmo salar)

(2012) Sofia Morais et al.   BMC GENOMICS

Dietary vegetable oils do not alter the intestine transcriptome of gilthead sea bream (Sparus aurata), but modulate the transcriptomic response to infection with Enteromyxum leei

(2012) Josep A Calduch-Giner et al.   BMC GENOMICS

Effect of ration size on fillet fatty acid composition, phospholipid allostasis and mRNA expression patterns of lipid regulatory genes in gilthead sea bream (Sparus aurata)

(2012) Laura Benedito-Palos et al.   BRITISH JOURNAL OF NUTRITION

G-Protein-Coupled Receptors in Intestinal Chemosensation

(2012) Frank Reimann et al.   Cell Metabolism

GI functions of GPR39: novel biology

(2012) Inge Depoortere   CURRENT OPINION IN PHARMACOLOGY

Stimulatory effects of chitinase on growth and immune defense of orange-spotted grouper (Epinephelus coioides)

(2012) Yanhong Zhang et al.   FISH & SHELLFISH IMMUNOLOGY

RNA-seq analysis of mucosal immune responses reveals signatures of intestinal barrier disruption and pathogen entry following Edwardsiella ictaluri infection in channel catfish, Ictalurus punctatus

(2012) Chao Li et al.   FISH & SHELLFISH IMMUNOLOGY

Modulation of the IgM gene expression and IgM immunoreactive cell distribution by the nutritional background in gilthead sea bream (Sparus aurata) challenged with Enteromyxum leei (Myxozoa)

(2012) Itziar Estensoro et al.   FISH & SHELLFISH IMMUNOLOGY

Early response of gene expression in the distal intestine of Atlantic salmon (Salmo salar L.) during the development of soybean meal induced enteritis

(2012) Christian Sahlmann et al.   FISH & SHELLFISH IMMUNOLOGY

Characterization of European Sea Bass Transcripts by RNA SEQ After Oral Vaccine Against V. anguillarum

(2012) E. Sarropoulou et al.   MARINE BIOTECHNOLOGY

Effects of the total replacement of fish-based diet with plant-based diet on the hepatic transcriptome of two European sea bass (Dicentrarchus labrax) half-sibfamilies showing different growth rates with the plant-based diet

(2011) Florian Geay et al.   BMC GENOMICS

Transcriptomic analyses of intestinal gene expression of juvenile Atlantic cod (Gadus morhua) fed diets with Camelina oil as replacement for fish oil

(2011) Sofia Morais et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Molecular profiling of the gilthead sea bream (Sparus aurata L.) response to chronic exposure to the myxosporean parasite Enteromyxum leei

(2011) Grace C. Davey et al.   MOLECULAR IMMUNOLOGY

Human nutrition, the gut microbiome and the immune system

(2011) Andrew L. Kau et al.   NATURE

Gene Expression Atlas update--a value-added database of microarray and sequencing-based functional genomics experiments

(2011) M. Kapushesky et al.   NUCLEIC ACIDS RESEARCH

A Compendium of Canine Normal Tissue Gene Expression

(2011) Joseph Briggs et al.   PLoS One

Gene expression responses to restricted feeding and extracted soybean meal in Atlantic salmon (Salmo salar L.)

(2010) S. SKUGOR et al.   AQUACULTURE NUTRITION

Morphological and molecular evidence for functional organization along the rostrocaudal axis of the adult zebrafish intestine

(2010) Zhengyuan Wang et al.   BMC GENOMICS

Antigen-sampling cells in the salmonid intestinal epithelium

(2010) Bjørn Fuglem et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Topographical distribution of antimicrobial genes in the zebrafish intestine

(2010) Stefan H. Oehlers et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Intestinal T cells of Dicentrarchus labrax (L.): Gene expression and functional studies

(2010) S. Picchietti et al.   FISH & SHELLFISH IMMUNOLOGY

Teleost intestinal immunology

(2010) Jan H.W.M. Rombout et al.   FISH & SHELLFISH IMMUNOLOGY

The metabolic life and times of a T-cell

(2010) Ryan D. Michalek et al.   IMMUNOLOGICAL REVIEWS

The nutritional background of the host alters the disease course in a fish–myxosporean system

(2010) Itziar Estensoro et al.   VETERINARY PARASITOLOGY

A nutrigenomic analysis of intestinal response to partial soybean meal replacement in diets for juvenile Atlantic halibut, Hippoglossus hippoglossus, L.

(2009) Harry M. Murray et al.   AQUACULTURE

Inverse correlation of the up-regulation of FZD10 expression and the activation of β-catenin in synchronous colorectal tumors

(2009) Satoshi Nagayama et al.   CANCER SCIENCE

Anatomical and histological profiling of orphan G-protein-coupled receptor expression in gastrointestinal tract of C57BL/6J mice

(2009) Junko Ito et al.   CELL AND TISSUE RESEARCH

The Effects of Immunostimulation Through Dietary Manipulation in the Rainbow Trout; Evaluation of Mucosal Immunity

(2009) Carmen Doñate et al.   MARINE BIOTECHNOLOGY

Spatio-temporal distribution of fatty acid-binding protein 6 (fabp6) gene transcripts in the developing and adult zebrafish (Danio rerio)

(2008) Fernanda A. Alves-Costa et al.   FEBS Journal

Two alternatively spliced GPR39 transcripts in seabream: molecular cloning, genomic organization, and regulation of gene expression by metabolic signals

(2008) Yong Zhang et al.   JOURNAL OF ENDOCRINOLOGY

The impact of dietary restriction, intermittent feeding and compensatory growth on reproductive investment and lifespan in a short-lived fish

(2008) C. L.W Inness et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES