In vivoexpression technology and 5′ end mapping of theBorrelia burgdorferitranscriptome identify novel RNAs expressed during mammalian infection
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Title
In vivoexpression technology and 5′ end mapping of theBorrelia burgdorferitranscriptome identify novel RNAs expressed during mammalian infection
Authors
Keywords
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Journal
NUCLEIC ACIDS RESEARCH
Volume 45, Issue 2, Pages 775-792
Publisher
Oxford University Press (OUP)
Online
2016-11-17
DOI
10.1093/nar/gkw1180
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Note: Only part of the references are listed.- Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq)
- (2016) Julia Babski et al. BMC GENOMICS
- Gene bb0318 Is Critical for the Oxidative Stress Response and Infectivity of Borrelia burgdorferi
- (2016) Adrienne C. Showman et al. INFECTION AND IMMUNITY
- The complexity of bacterial transcriptomes
- (2016) D. Stazic et al. JOURNAL OF BIOTECHNOLOGY
- ABorrelia burgdorferiSurface-Exposed Transmembrane Protein Lacking Detectable Immune Responses Supports Pathogen Persistence and Constitutes a Vaccine Target
- (2016) Faith Kung et al. JOURNAL OF INFECTIOUS DISEASES
- Global Tn-seq analysis of carbohydrate utilization and vertebrate infectivity of Borrelia burgdorferi
- (2016) Erin B. Troy et al. MOLECULAR MICROBIOLOGY
- Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactions
- (2016) Alexander J. Westermann et al. NATURE
- Term-seq reveals abundant ribo-regulation of antibiotics resistance in bacteria
- (2016) D. Dar et al. SCIENCE
- In Vivo Imaging Demonstrates That Borrelia burgdorferi ospC Is Uniquely Expressed Temporally and Spatially throughout Experimental Infection
- (2016) Jonathan T. Skare et al. PLoS One
- RNA-Seq of Borrelia burgdorferi in Multiple Phases of Growth Reveals Insights into the Dynamics of Gene Expression, Transcriptome Architecture, and Noncoding RNAs
- (2016) William K. Arnold et al. PLoS One
- Single nucleotide resolution RNA-seq uncovers new regulatory mechanisms in the opportunistic pathogen Streptococcus agalactiae
- (2015) Isabelle Rosinski-Chupin et al. BMC GENOMICS
- Ecology and Epidemiology of Lyme Borreliosis
- (2015) Anna M. Schotthoefer et al. CLINICS IN LABORATORY MEDICINE
- Molecular Dissection of a Borrelia burgdorferiIn VivoEssential Purine Transport System
- (2015) Sunny Jain et al. INFECTION AND IMMUNITY
- Cyclic di-GMP Modulates Gene Expression in Lyme Disease Spirochetes at the Tick-Mammal Interface To Promote Spirochete Survival during the Blood Meal and Tick-to-Mammal Transmission
- (2015) Melissa J. Caimano et al. INFECTION AND IMMUNITY
- Differential RNA-seq ofVibrio choleraeidentifies the VqmR small RNA as a regulator of biofilm formation
- (2015) Kai Papenfort et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Transcriptomic Profiling of Yersinia pseudotuberculosis Reveals Reprogramming of the Crp Regulon by Temperature and Uncovers Crp as a Master Regulator of Small RNAs
- (2015) Aaron M. Nuss et al. PLoS Genetics
- Leaderless Transcripts and Small Proteins Are Common Features of the Mycobacterial Translational Landscape
- (2015) Scarlet S. Shell et al. PLoS Genetics
- The Borrelia burgdorferi RelA/SpoT Homolog and Stringent Response Regulate Survival in the Tick Vector and Global Gene Expression during Starvation
- (2015) Dan Drecktrah et al. PLoS Pathogens
- The Intraperitoneal Transcriptome of the Opportunistic Pathogen Enterococcus faecalis in Mice
- (2015) Cécile Muller et al. PLoS One
- A phylogenomic and molecular marker based proposal for the division of the genus Borrelia into two genera: the emended genus Borrelia containing only the members of the relapsing fever Borrelia, and the genus Borreliella gen. nov. containing the members of the Lyme disease Borrelia (Borrelia burgdorferi sensu lato complex)
- (2014) Mobolaji Adeolu et al. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
- BorreliaBase: a phylogeny-centered browser of Borrelia genomes
- (2014) Lia Di et al. BMC BIOINFORMATICS
- Global Transcriptional Start Site Mapping Using Differential RNA Sequencing Reveals Novel Antisense RNAs in Escherichia coli
- (2014) Maureen K. Thomason et al. JOURNAL OF BACTERIOLOGY
- Stage-specific global alterations in the transcriptomes of Lyme disease spirochetes during tick feeding and following mammalian host adaptation
- (2014) Radha Iyer et al. MOLECULAR MICROBIOLOGY
- Correction: In Vivo Expression Technology Identifies a Novel Virulence Factor Critical for Borrelia burgdorferi Persistence in Mice
- (2014) PLoS Pathogens
- NextGenMap: fast and accurate read mapping in highly polymorphic genomes
- (2013) Fritz J. Sedlazeck et al. BIOINFORMATICS
- Posttranscriptional Self-Regulation by the Lyme Disease Bacterium's BpuR DNA/RNA-Binding Protein
- (2013) B. L. Jutras et al. JOURNAL OF BACTERIOLOGY
- Determination of sRNA Expressions by RNA-seq in Yersinia pestis Grown In Vitro and during Infection
- (2013) Yanfeng Yan et al. PLoS One
- Sequence, biophysical, and structural analyses of the PstS lipoprotein (BB0215) fromBorrelia burgdorferireveal a likely binding component of an ABC-type phosphate transporter
- (2013) Chad A. Brautigam et al. PROTEIN SCIENCE
- Evidence for an ABC-Type Riboflavin Transporter System in Pathogenic Spirochetes
- (2013) R. K. Deka et al. mBio
- Genome-wide Mapping of Transcriptional Start Sites Defines an Extensive Leaderless Transcriptome in Mycobacterium tuberculosis
- (2013) Teresa Cortes et al. Cell Reports
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- (2013) Gaurav Dugar et al. PLoS Genetics
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- (2012) Sunny Jain et al. INFECTION AND IMMUNITY
- Comparative transcriptomics of pathogenic and non-pathogenic Listeria species
- (2012) Omri Wurtzel et al. Molecular Systems Biology
- Bacterial RNA thermometers: molecular zippers and switches
- (2012) Jens Kortmann et al. NATURE REVIEWS MICROBIOLOGY
- Of ticks, mice and men: understanding the dual-host lifestyle of Lyme disease spirochaetes
- (2012) Justin D. Radolf et al. NATURE REVIEWS MICROBIOLOGY
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- (2012) Tao Lin et al. PLoS One
- The transcriptional landscape and small RNAs of Salmonella enterica serovar Typhimurium
- (2012) C. Kroger et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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- (2011) Oliver Vesper et al. CELL
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- (2011) Anjali Mandlik et al. Cell Host & Microbe
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- (2011) M. A. Motaleb et al. JOURNAL OF BACTERIOLOGY
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- (2011) Christopher J. Pappas et al. PLoS Pathogens
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- (2011) Ming He et al. PLoS Pathogens
- Gene Regulation inBorrelia burgdorferi
- (2010) D. Scott Samuels Annual Review of Microbiology
- Insights intoStreptococcus pyogenespathogenesis from transcriptome studies
- (2010) Tomas Fiedler et al. Future Microbiology
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- (2010) Daniel E Sturdevant et al. Future Microbiology
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- (2010) J. Mendez et al. JOURNAL OF BACTERIOLOGY
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- (2010) R. O. M. Rego et al. JOURNAL OF BACTERIOLOGY
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- (2010) Syed Z. Sultan et al. MOLECULAR MICROBIOLOGY
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- (2010) Cynthia M. Sharma et al. NATURE
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- (2010) Irnov Irnov et al. NUCLEIC ACIDS RESEARCH
- Screening of In Vivo Activated Genes in Enterococcus faecalis during Insect and Mouse Infections and Growth in Urine
- (2010) Aurelie Hanin et al. PLoS One
- Riboswitch RNAs: Regulation of gene expression by direct monitoring of a physiological signal
- (2010) Angela M. Smith et al. RNA Biology
- Chitobiose utilization in Borrelia burgdorferi is dually regulated by RpoD and RpoS
- (2009) Ryan G Rhodes et al. BMC MICROBIOLOGY
- GuaA and GuaB Are Essential for Borrelia burgdorferi Survival in the Tick-Mouse Infection Cycle
- (2009) M. W. Jewett et al. JOURNAL OF BACTERIOLOGY
- Borrelia burgdorferi bb0426encodes a 2′-deoxyribosyltransferase that plays a central role in purine salvage
- (2009) Kevin A. Lawrence et al. MOLECULAR MICROBIOLOGY
- Northern blot analysis for detection and quantification of RNA in pancreatic cancer cells and tissues
- (2009) Sylvia Streit et al. Nature Protocols
- Genome-Wide Identification of Transcription Start Sites, Promoters and Transcription Factor Binding Sites in E. coli
- (2009) Alfredo Mendoza-Vargas et al. PLoS One
- A Chromosomally Encoded Virulence Factor Protects the Lyme Disease Pathogen against Host-Adaptive Immunity
- (2009) Xiuli Yang et al. PLoS Pathogens
- Biology of Infection with Borrelia burgdorferi
- (2008) Kit Tilly et al. INFECTIOUS DISEASE CLINICS OF NORTH AMERICA
- Reciprocal Expression of ospA and ospC in Single Cells of Borrelia burgdorferi
- (2008) S. Y. Srivastava et al. JOURNAL OF BACTERIOLOGY
- The identity of the transcription +1 position is crucial for changes in gene expression in response to amino acid starvation inBacillus subtilis
- (2008) Libor Krásný et al. MOLECULAR MICROBIOLOGY
- Riboswitches in Eubacteria Sense the Second Messenger Cyclic Di-GMP
- (2008) N. Sudarsan et al. SCIENCE
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