Near-atomic-resolution cryo-EM analysis of the Salmonella T3S injectisome basal body

Architecture of the type IVa pilus machine

(2016) Yi-Wei Chang et al.   SCIENCE

CTFFIND4: Fast and accurate defocus estimation from electron micrographs

(2015) Alexis Rohou et al.   JOURNAL OF STRUCTURAL BIOLOGY

Assembly of the secretion pores GspD, Wza and CsgG into bacterial outer membranes does not require the Omp85 proteins BamA or TamA

(2015) Rhys A. Dunstan et al.   MOLECULAR MICROBIOLOGY

Atomic-accuracy models from 4.5-Å cryo-electron microscopy data with density-guided iterative local refinement

(2015) Frank DiMaio et al.   NATURE METHODS

EMRinger: side chain–directed model and map validation for 3D cryo-electron microscopy

(2015) Benjamin A Barad et al.   NATURE METHODS

Visualization of the type III secretion sorting platform ofShigella flexneri

(2015) Bo Hu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Modular Structure of the Inner-Membrane Ring Component PrgK Facilitates Assembly of the Type III Secretion System Basal Body

(2015) Julien R.C. Bergeron et al.   STRUCTURE

Structure of a bacterial type III secretion system in contact with a host membrane in situ

(2015) Andrea Nans et al.   Nature Communications

Lipids assist the membrane insertion of a BAM-independent outer membrane protein

(2015) Gerard H. M. Huysmans et al.   Scientific Reports

Measuring the optimal exposure for single particle cryo-EM using a 2.6 Å reconstruction of rotavirus VP6

(2015) Timothy Grant et al.   eLife

Structural Similarity of Secretins from Type II and Type III Secretion Systems

(2014) Tommaso Tosi et al.   STRUCTURE

Independent Domain Assembly in a Trapped Folding Intermediate of Multimeric Outer Membrane Secretins

(2014) Ingrid Guilvout et al.   STRUCTURE

Bacterial Secretins Form Constitutively Open Pores Akin to General Porins

(2013) E. Disconzi et al.   JOURNAL OF BACTERIOLOGY

Sequential Steps in the Assembly of the Multimeric Outer Membrane Secretin PulD

(2013) Gerard H. M. Huysmans et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Quantifying the local resolution of cryo-EM density maps

(2013) Alp Kucukelbir et al.   NATURE METHODS

High-Resolution Comparative Modeling with RosettaCM

(2013) Yifan Song et al.   STRUCTURE

Structure of the Dodecameric Yersinia enterocolitica Secretin YscC and Its Trypsin-Resistant Core

(2013) Julia Kowal et al.   STRUCTURE

High-resolution noise substitution to measure overfitting and validate resolution in 3D structure determination by single particle electron cryomicroscopy

(2013) Shaoxia Chen et al.   ULTRAMICROSCOPY

A Refined Model of the Prototypical Salmonella SPI-1 T3SS Basal Body Reveals the Molecular Basis for Its Assembly

(2013) Julien R. C. Bergeron et al.   PLoS Pathogens

RELION: Implementation of a Bayesian approach to cryo-EM structure determination

(2012) Sjors H.W. Scheres   JOURNAL OF STRUCTURAL BIOLOGY

The Proteomics Identifications (PRIDE) database and associated tools: status in 2013

(2012) Juan Antonio Vizcaíno et al.   NUCLEIC ACIDS RESEARCH

Structural and Functional Insights into the Pilotin-Secretin Complex of the Type II Secretion System

(2012) Shuang Gu et al.   PLoS Pathogens

Decoding the roles of pilotins and accessory proteins in secretin escort services

(2011) Jason Koo et al.   FEMS MICROBIOLOGY LETTERS

Multimerization-defective variants of dodecameric secretin PulD

(2011) Ingrid Guilvout et al.   RESEARCH IN MICROBIOLOGY

Three-Dimensional Model of Salmonella's Needle Complex at Subnanometer Resolution

(2011) O. Schraidt et al.   SCIENCE

Secretins: dynamic channels for protein transport across membranes

(2011) Konstantin V. Korotkov et al.   TRENDS IN BIOCHEMICAL SCIENCES

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

PHENIX: a comprehensive Python-based system for macromolecular structure solution

(2010) Paul D. Adams et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Structural overview of the bacterial injectisome

(2010) Liam J Worrall et al.   CURRENT OPINION IN MICROBIOLOGY

Identification of the gate regions in the primary structure of the secretin pIV

(2010) Julian Spagnuolo et al.   MOLECULAR MICROBIOLOGY

Structure of the cholera toxin secretion channel in its closed state

(2010) Steve L Reichow et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids

(2010) H. Ashkenazy et al.   NUCLEIC ACIDS RESEARCH

Topology and Organization of the Salmonella typhimurium Type III Secretion Needle Complex Components

(2010) Oliver Schraidt et al.   PLoS Pathogens

MolProbity: all-atom structure validation for macromolecular crystallography

(2009) Vincent B. Chen et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Three-dimensional reconstruction of the Shigella T3SS transmembrane regions reveals 12-fold symmetry and novel features throughout

(2009) Julie L Hodgkinson et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

A conserved structural motif mediates formation of the periplasmic rings in the type III secretion system

(2009) Thomas Spreter et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Crystal Structure of the N-Terminal Domain of the Secretin GspD from ETEC Determined with the Assistance of a Nanobody

(2009) Konstantin V. Korotkov et al.   STRUCTURE

In Vitro Multimerization and Membrane Insertion of Bacterial Outer Membrane Secretin PulD

(2008) Ingrid Guilvout et al.   JOURNAL OF MOLECULAR BIOLOGY

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY

Structural Characterization of the Type-III Pilot-Secretin Complex from Shigella flexneri

(2008) Mark Okon et al.   STRUCTURE