A comparative assessment of SNP and microsatellite markers for assigning parentage in a socially monogamous bird

Development and validation of a SNP panel for parentage assignment in rainbow trout

(2016) Sixin Liu et al.   AQUACULTURE

Genomic approaches to understanding population divergence and speciation in birds

(2016) David P. L. Toews et al.   AUK

Construction of relatedness matrices using genotyping-by-sequencing data

(2015) Ken G. Dodds et al.   BMC GENOMICS

How many markers are enough? Factors influencing parentage testing in different livestock populations

(2015) E.M. Strucken et al.   JOURNAL OF ANIMAL BREEDING AND GENETICS

Differentially expressed genes match bill morphology and plumage despite largely undifferentiated genomes in a Holarctic songbird

(2015) Nicholas A. Mason et al.   MOLECULAR ECOLOGY

Experimental food supplementation reveals habitat-dependent male reproductive investment in a migratory bird

(2015) S. A. Kaiser et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Assessment of microsatellite and SNP markers for parentage assignment in ex situ African Penguin (Spheniscus demersus) populations

(2015) Christiaan Labuschagne et al.   Ecology and Evolution

Using Mendelian Inheritance To Improve High-Throughput SNP Discovery

(2014) N. Chen et al.   GENETICS

Use of genotyping by sequencing data to develop a high-throughput and multifunctional SNP panel for conservation applications in Pacific lamprey

(2014) Jon E. Hess et al.   Molecular Ecology Resources

A comparison of single nucleotide polymorphism and microsatellite markers for analysis of parentage and kinship in a cooperatively breeding bird

(2014) Lucia R. Weinman et al.   Molecular Ecology Resources

High-utility conserved avian microsatellite markers enable parentage and population studies across a wide range of species

(2013) Deborah A Dawson et al.   BMC GENOMICS

Comparison of the effectiveness of microsatellites and SNP panels for genetic identification, traceability and assessment of parentage in an inbred Angus herd

(2013) María E. Fernández et al.   GENETICS AND MOLECULAR BIOLOGY

Reference-free SNP discovery for the Eurasian beaver from restriction site-associated DNA paired-end data

(2013) Helen Senn et al.   MOLECULAR ECOLOGY

SNP development from RNA-seq data in a nonmodel fish: how many individuals are needed for accurate allele frequency prediction?

(2013) C. Schunter et al.   Molecular Ecology Resources

De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis

(2013) Brian J Haas et al.   Nature Protocols

Comparison of microsatellite and SNP DNA markers for pedigree assignment in Black Tiger shrimp,Penaeus monodon

(2012) Melony J Sellars et al.   AQUACULTURE RESEARCH

RobiNA: a user-friendly, integrated software solution for RNA-Seq-based transcriptomics

(2012) M. Lohse et al.   NUCLEIC ACIDS RESEARCH

Patterns of multiple paternity and maternity in fishes

(2011) SETH W. COLEMAN et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Infrequent Extra-Pair Paternity in the Banded Wren, a Synchronously Breeding Tropical Passerine

(2011) Emily R. A. Cramer et al.   CONDOR

An empirical comparison of SNPs and microsatellites for parentage and kinship assignment in a wild sockeye salmon (Oncorhynchus nerka) population

(2011) LORENZ HAUSER et al.   Molecular Ecology Resources

Application of SNPs for population genetics of nonmodel organisms: new opportunities and challenges

(2011) S. J. HELYAR et al.   Molecular Ecology Resources

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

Genotype and SNP calling from next-generation sequencing data

(2011) Rasmus Nielsen et al.   NATURE REVIEWS GENETICS

Genome-wide genetic marker discovery and genotyping using next-generation sequencing

(2011) John W. Davey et al.   NATURE REVIEWS GENETICS

Environmental Uncertainty and the Global Biogeography of Cooperative Breeding in Birds

(2010) Walter Jetz et al.   CURRENT BIOLOGY

Avian population and community processes in forest ecosystems: Long-term research in the Hubbard Brook Experimental Forest

(2010) Richard T. Holmes   FOREST ECOLOGY AND MANAGEMENT

Application of single nucleotide polymorphisms to non-model species: a technical review

(2010) M. R. GARVIN et al.   Molecular Ecology Resources

Target-enrichment strategies for next-generation sequencing

(2010) Lira Mamanova et al.   NATURE METHODS

Evolutionary stasis: the stable chromosomes of birds

(2010) Hans Ellegren   TRENDS IN ECOLOGY & EVOLUTION

Geographic Variation in the Mitochondrial Control Region of Black-throated Blue Warblers (Dendroica caerulescens)

(2009) Wendy E. Grus et al.   AUK

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Fast, cost-effective development of species-specific microsatellite markers by genomic sequencing

(2009) Jawad Abdelkrim et al.   BIOTECHNIQUES

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Effectiveness of microsatellite and SNP markers for parentage and identity analysis in species with low genetic diversity: the case of European bison

(2009) M Tokarska et al.   HEREDITY

Multiple paternity in reptiles: patterns and processes

(2008) TOBIAS ULLER et al.   MOLECULAR ECOLOGY

Extra pair paternity in birds: a review of interspecific variation and adaptive function

(2003) Simon C. Griffith et al.   MOLECULAR ECOLOGY