A computational model to uncover the biophysical underpinnings of neural firing heterogeneity in dissociated hippocampal cultures

Three-Dimensional Tracking of Intracellular Calcium and Redox State during Real-Time Control in a Hypoxic Gradient in Microglia Culture: Comparison of the Channel Blocker and Reoxygenation under Ischemic Shock

(2023) Vaibhav Dhyani et al.   ACS Chemical Neuroscience

Cell type-specific mechanisms of information transfer in data-driven biophysical models of hippocampal CA3 principal neurons

(2022) Daniele Linaro et al.   PLoS Computational Biology

Dendritic branch structure compartmentalizes voltage-dependent calcium influx in cortical layer 2/3 pyramidal cells

(2022) Andrew T Landau et al.   eLife

Ca2+ signaling in postsynaptic neurons: Neuroplastin-65 regulates the interplay between plasma membrane Ca2+ ATPases and ionotropic glutamate receptors

(2022) Ayse Malci et al.   CELL CALCIUM

Modeling of Astrocyte Networks: Toward Realistic Topology and Dynamics

(2021) Andrey Yu. Verisokin et al.   Frontiers in Cellular Neuroscience

Stochastic reaction-diffusion modeling of calcium dynamics in 3D dendritic spines of Purkinje cells

(2021) Victor Nicolai Friedhoff et al.   BIOPHYSICAL JOURNAL

Inferring spikes from calcium imaging in dopamine neurons

(2021) Weston Fleming et al.   PLoS One

APPsα rescues impaired Ca2+ homeostasis in APP- and APLP2-deficient hippocampal neurons

(2021) Susann Ludewig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Activation of D1/D5 receptors ameliorates decreased intrinsic excitability of hippocampal neurons induced by neonatal blockade of N ‐methyl‐ d ‐aspartate receptors

(2021) Ernesto Griego et al.   BRITISH JOURNAL OF PHARMACOLOGY

Statistical modeling of cell‐to‐cell variability in viral infection during passaging in suspension cell culture: Application in Monte‐Carlo simulation

(2020) Abha Saxena et al.   BIOTECHNOLOGY AND BIOENGINEERING

Three‐dimensional imaging and quantification of real‐time cytosolic calcium oscillations in microglial cells cultured on electrospun matrices using laser scanning confocal microscopy

(2020) Kojja Venkateswarlu et al.   BIOTECHNOLOGY AND BIOENGINEERING

Calcium-induced calcium release and type 3 ryanodine receptors modulate the slow afterhyperpolarising current, sIAHP, and its potentiation in hippocampal pyramidal neurons

(2020) Angelo Tedoldi et al.   PLoS One

Chronic but not acute pharmacological activation of SERCA induces behavioral and neurochemical effects in male and female mice

(2020) Aikaterini Britzolaki et al.   BEHAVIOURAL BRAIN RESEARCH

Heterogeneity within classical cell types is the rule: lessons from hippocampal pyramidal neurons

(2019) Mark S. Cembrowski et al.   NATURE REVIEWS NEUROSCIENCE

Role of specific presynaptic calcium channel subtypes in isoflurane inhibition of synaptic vesicle exocytosis in rat hippocampal neurones

(2019) Yuko Koyanagi et al.   BRITISH JOURNAL OF ANAESTHESIA

Glutamatergic synaptic input to glioma cells drives brain tumour progression

(2019) Varun Venkataramani et al.   NATURE

Confocal Imaging and k-Means Clustering of GABAB and mGluR Mediated Modulation of Ca2+ Spiking in Hippocampal Neurons

(2018) Sarpras Swain et al.   ACS Chemical Neuroscience

A mathematical and computational model of the calcium dynamics in Caenorhabditis elegans ASH sensory neuron

(2018) Ehsan Mirzakhalili et al.   PLoS One

Detecting neural assemblies in calcium imaging data

(2018) Jan Mölter et al.   BMC BIOLOGY

Parallel Stochastic discrete event simulation of calcium dynamics in neuron.

(2017) Mohammad Nazrul Ishlam Patoary et al.   IEEE-ACM Transactions on Computational Biology and Bioinformatics

Mesoscale Architecture Shapes Initiation and Richness of Spontaneous Network Activity

(2017) Samora Okujeni et al.   JOURNAL OF NEUROSCIENCE

Calcium dependence of spontaneous neurotransmitter release

(2017) Courtney L. Williams et al.   JOURNAL OF NEUROSCIENCE RESEARCH

Extracellular Glutamate in the Nucleus Accumbens Is Nanomolar in Both Synaptic and Non-synaptic Compartments

(2017) Delia N. Chiu et al.   Cell Reports

Two-photon calcium imaging of the medial prefrontal cortex and hippocampus without cortical invasion

(2017) Masashi Kondo et al.   eLife

Dysregulation of Intracellular Ca2+ in Dystrophic Cortical and Hippocampal Neurons

(2016) José R. Lopez et al.   MOLECULAR NEUROBIOLOGY

Distinct cellular states determine calcium signaling response

(2016) Jason Yao et al.   Molecular Systems Biology

Dynamic transition of neuronal firing induced by abnormal astrocytic glutamate oscillation

(2016) Jiajia Li et al.   Scientific Reports

Store-operated calcium entry compensates fast ER calcium loss in resting hippocampal neurons

(2015) Samira Samtleben et al.   CELL CALCIUM

Neurotransmitters and Neuropeptides: New Players in the Control of Islet of Langerhans' Cell Mass and Function

(2015) Eliana S. Di Cairano et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Distinctive PSA-NCAM and NCAM Hallmarks in Glutamate-Induced Dendritic Atrophy and Synaptic Disassembly

(2014) María Fernanda Podestá et al.   PLoS One

Intracellular calcium level is an important factor influencing ion channel modulations by PLC-coupled metabotropic receptors in hippocampal neurons

(2013) Yuto Sugawara et al.   BRAIN RESEARCH

The Influence of Neuronal Density and Maturation on Network Activity of Hippocampal Cell Cultures: A Methodological Study

(2013) Emilia Biffi et al.   PLoS One

Spatially clustered neuronal assemblies comprise the microstructure of synchrony in chronically epileptic networks

(2013) Sarah Feldt Muldoon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Correlations in ion channel expression emerge from homeostatic tuning rules

(2013) T. O'Leary et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Methods for recording and measuring tonic GABAA receptor-mediated inhibition

(2013) Damian P. Bright et al.   Frontiers in Neural Circuits

Myelination of rodent hippocampal neurons in culture

(2012) Asa Gardner et al.   Nature Protocols

Riluzole and gabapentinoids activate glutamate transporters to facilitate glutamate-induced glutamate release from cultured astrocytes

(2011) Masaru Yoshizumi et al.   EUROPEAN JOURNAL OF PHARMACOLOGY

Cav1.3 Calcium Channels Are Required for Normal Development of the Auditory Brainstem

(2011) J. J. Hirtz et al.   JOURNAL OF NEUROSCIENCE

Effects of Transmitters and Amyloid-Beta Peptide on Calcium Signals in Rat Cortical Astrocytes: Fura-2AM Measurements and Stochastic Model Simulations

(2011) Eeva Toivari et al.   PLoS One

The endoplasmic reticulum and protein trafficking in dendrites and axons

(2011) Omar A. Ramírez et al.   TRENDS IN CELL BIOLOGY

Non-synaptic receptors and transporters involved in brain functions and targets of drug treatment

(2010) ES Vizi et al.   BRITISH JOURNAL OF PHARMACOLOGY

Blockade of Astrocytic Glutamate Uptake in Rats Induces Signs of Anhedonia and Impaired Spatial Memory

(2010) Anita J Bechtholt-Gompf et al.   NEUROPSYCHOPHARMACOLOGY

Voltage-activated calcium channel expression profiles in mouse brain and cultured hippocampal neurons

(2010) B. Schlick et al.   NEUROSCIENCE

Simulation of Spontaneous Ca2+ Oscillations in Astrocytes Mediated by Voltage-Gated Calcium Channels

(2009) Shuai Zeng et al.   BIOPHYSICAL JOURNAL

Stimulation of NMDA and AMPA glutamate receptors elicits distinct concentration dynamics of nitric oxide in rat hippocampal slices

(2009) J.G. Frade et al.   HIPPOCAMPUS

Glutamate regulation of calcium and IP3 oscillating and pulsating dynamics in astrocytes

(2009) Maurizio De Pittà et al.   JOURNAL OF BIOLOGICAL PHYSICS

Differential distribution of endoplasmic reticulum controls metabotropic signaling and plasticity at hippocampal synapses

(2009) N. Holbro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Presynaptic glutamate receptors: physiological functions and mechanisms of action

(2008) Paulo S. Pinheiro et al.   NATURE REVIEWS NEUROSCIENCE