Deciphering the dysbiosis caused in the fish microbiota by emerging contaminants and its mitigation strategies-A review

Toxicity of titanium dioxide nanoparticles on the histology, liver physiological and metabolism, and intestinal microbiota of grouper

(2023) Yafei Duan et al.   MARINE POLLUTION BULLETIN

The role of the microbiome on fish mucosal immunity under changing environments

(2023) Syed Monzur Morshed et al.   FISH & SHELLFISH IMMUNOLOGY

Bacteria in biofloc technology aquaculture systems: roles and mediating factors

(2022) Godwin Abakari et al.   Reviews in Aquaculture

Ammonia in the presence of nano titanium dioxide (nano-TiO2) induces greater oxidative damage in the gill and liver of female zebrafish

(2022) Honghui Guo et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Gut microbiota analysis of Blenniidae fishes including an algae-eating fish and clear boundary formation among isolated Vibrio strains

(2022) Masa-aki Yoshida et al.   Scientific Reports

Effect of dietary oxidized fish oil on growth performance, physiological homeostasis and intestinal microbiome in hybrid grouper (♀ Epi-nephelus fuscoguttatus × ♂ Epinephelus lanceolatus)

(2022) Shuisheng Long et al.   Aquaculture Reports

Polystyrene Microplastics Induce Gut Microbiome and Metabolome Changes in Javanese Medaka Fish (Oryzias javanicus Bleeker, 1854)

(2022) Sunusi Usman et al.   Toxicology Reports

Di-(2-ethylhexyl) phthalate exacerbated the toxicity of polystyrene nanoplastics through histological damage and intestinal microbiota dysbiosis in freshwater Micropterus salmoides

(2022) Hongping Liao et al.   WATER RESEARCH

Acute exposure to microplastics induces metabolic disturbances and gut dysbiosis in adult zebrafish (Danio rerio)

(2022) Carl Angelo Medriano et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Exploring the interactions between the gut microbiome and the shifting surrounding aquatic environment in fisheries and aquaculture: A review

(2022) Cheng-Zhuang Chen et al.   ENVIRONMENTAL RESEARCH

Microorganisms in biofloc aquaculture system

(2022) Mohammad Hossein Khanjani et al.   Aquaculture Reports

Climate warming amplifies the frequency of fish mass mortality events across north temperate lakes

(2022) Simon P. Tye et al.   Limnology and Oceanography Letters

Toxic Effects of Xenobiotic Compounds on the Microbial Community of Activated Sludge

(2022) Ahmad Hussaini Jagaba et al.   ChemBioEng Reviews

Impact of environmental micropollutants and diet composition on the gut microbiota of wild european eels (Anguilla anguilla)

(2022) Anthony Bertucci et al.   ENVIRONMENTAL POLLUTION

Potentially hazardous elements in sediments and Ceratophyllum demersum: an ecotoxicological risk assessment in Miliç Wetland, Samsun, Türkiye

(2022) Halim Topaldemir et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Fish disease and intestinal microbiota: A close and indivisible relationship

(2022) Diana Medina‐Félix et al.   Reviews in Aquaculture

Differential study of the Parabramis pekinensis intestinal microbiota according to different habitats and different parts of the intestine

(2021) Hailong Gu et al.   ANNALS OF MICROBIOLOGY

Gut microbiota dynamics in carnivorous European seabass (Dicentrarchus labrax) fed plant-based diets

(2021) Cláudia R. Serra et al.   Scientific Reports

Bacterial Diversity Analysis and Evaluation Proteins Hydrolysis during the Acid Whey and Fish Waste Fermentation

(2021) Alba C. Mayta-Apaza et al.   Microorganisms

Role of germ-free animal models in understanding interactions of gut microbiota to host and environmental health: A special reference to zebrafish

(2021) Pan-Pan Jia et al.   ENVIRONMENTAL POLLUTION

Long-term exposure to high-concentration silver nanoparticles induced toxicity, fatality, bioaccumulation, and histological alteration in fish (Cyprinus carpio)

(2021) Mian Adnan Kakakhel et al.   Environmental Sciences Europe

The role of intestinal microbiota of the marine fish (Acanthopagrus latus) in mercury biotransformation

(2021) Tao-Tao Yang et al.   ENVIRONMENTAL POLLUTION

Microplastics contamination in the surface water of the Yangtze River from upstream to estuary based on different sampling methods

(2021) Da He et al.   ENVIRONMENTAL RESEARCH

A 20-year retrospective review of global aquaculture

(2021) Rosamond L. Naylor et al.   NATURE

Size-dependent adverse effects of microplastics on intestinal microbiota and metabolic homeostasis in the marine medaka (Oryzias melastigma)

(2021) Xu Zhang et al.   ENVIRONMENT INTERNATIONAL

Synergistic effect of lotus seed resistant starch and short-chain fatty acids on mice fecal microbiota in vitro

(2021) Xin Li et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Changes in the microbial communities of the rearing water, sediment and gastrointestinal tract of Lateolabrax maculatus at two growth stages

(2021) Yafei Duan et al.   Aquaculture Reports

Therapeutic modulation of fish gut microbiota, a feasible strategy for aquaculture?

(2021) Francisco Vargas-Albores et al.   AQUACULTURE

Genomic convergence between Akkermansia muciniphila in different mammalian hosts

(2021) Sharon Y. Geerlings et al.   BMC MICROBIOLOGY

Ecotoxicological risk assessment for sediments of Çavuşlu stream in Giresun, Turkey: association between garbage disposal facility and metallic accumulation

(2021) Bayram Yüksel et al.   ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH

Dietary application of Lactococcus lactis alleviates toxicity and regulates gut microbiota in Cyprinus carpio on exposure to heavy metals mixture

(2021) Apurva Kakade et al.   FISH & SHELLFISH IMMUNOLOGY

Micro/nano-plastics cause neurobehavioral toxicity in discus fish (Symphysodon aequifasciatus): Insight from brain-gut-microbiota axis

(2021) Jun-Nan Huang et al.   JOURNAL OF HAZARDOUS MATERIALS

In-Situ Biofloc Affects the Core Prokaryotes Community Composition in Gut and Enhances Growth of Nile Tilapia (Oreochromis niloticus)

(2021) Yale Deng et al.   MICROBIAL ECOLOGY

Evaluation of the antibacterial influence of silver nanoparticles against fish pathogenic bacterial isolates and their toxicity against common carp fish

(2021) Mian Adnan Kakakhel et al.   MICROSCOPY RESEARCH AND TECHNIQUE

Multi-region assessment of pharmaceutical exposures and predicted effects in USA wadeable urban-gradient streams

(2020) Paul M. Bradley et al.   PLoS One

Gut microbiota metagenomics in aquaculture: factors influencing gut microbiome and its physiological role in fish

(2020) Kumarasan Yukgehnaish et al.   Reviews in Aquaculture

Feed, Microbiota, and Gut Immunity: Using the Zebrafish Model to Understand Fish Health

(2020) Adrià López Nadal et al.   Frontiers in Immunology

Microplastics in surface water and sediments of Chongming Island in the Yangtze Estuary, China

(2020) Yubo Li et al.   Environmental Sciences Europe

The new aspects of using some safe feed additives on alleviated imidacloprid toxicity in farmed fish: a review

(2020) Mohammed A. E. Naiel et al.   Reviews in Aquaculture

Effects of Carbon/Nitrogen Ratio on Growth, Intestinal Microbiota and Metabolome of Shrimp (Litopenaeus vannamei)

(2020) Haipeng Guo et al.   Frontiers in Microbiology

Phylogenomics of expanding uncultured environmental Tenericutes provides insights into their pathogenicity and evolutionary relationship with Bacilli

(2020) Yong Wang et al.   BMC GENOMICS

No quarter: Lack of refuge during flow intermittency results in catastrophic mortality of an imperiled minnow

(2020) Thomas P. Archdeacon et al.   FRESHWATER BIOLOGY

Mining zebrafish microbiota reveals key community-level resistance against fish pathogen infection

(2020) Franziska A. Stressmann et al.   ISME Journal

Probiotics in poultry feed: A comprehensive review

(2020) Mohamed E. Abd El‐Hack et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Oxidation of fish oil exacerbates alcoholic liver disease by enhancing intestinal dysbiosis in mice

(2020) Ruibing Feng et al.   Communications Biology

Inulin alleviates hypersaline-stress induced oxidative stress and dysbiosis of gut microbiota in Nile tilapia (Oreochromis niloticus)

(2020) Li Zhou et al.   AQUACULTURE

Dynamic changes of gut microbiota of discus fish (Symphysodon haraldi) at different feeding stages

(2020) Yuan Zhang et al.   AQUACULTURE

Biofloc Technology: Emerging Microbial Biotechnology for the Improvement of Aquaculture Productivity

(2020) MAMDOH T. JAMAL et al.   Polish Journal of Microbiology

Effects of dietary lipid sources on the intestinal microbiome and health of golden pompano (Trachinotus ovatus)

(2019) Cuihong You et al.   FISH & SHELLFISH IMMUNOLOGY

Biofloc formation improves water quality and fish yield in a freshwater pond aquaculture system

(2019) Haokun Liu et al.   AQUACULTURE

Gut microbiota of aquatic organisms: A key endpoint for ecotoxicological studies

(2019) Lauris Evariste et al.   ENVIRONMENTAL POLLUTION

Potential immunomodulatory and protective effects of the Arthrospira-based dietary supplement on shrimp intestinal immune defenses

(2019) Mariana Rangel Pilotto et al.   FISH & SHELLFISH IMMUNOLOGY

Hematological parameters and antioxidant responses in olive flounder Paralichthys olivaceus in biofloc depend on water temperature

(2019) Jun-Hwan Kim et al.   JOURNAL OF THERMAL BIOLOGY

Berberine Influences Blood Glucose via Modulating the Gut Microbiome in Grass Carp

(2019) Houjun Pan et al.   Frontiers in Microbiology

Administration of antibiotics can cause dysbiosis in fish gut

(2019) Ahran Kim et al.   AQUACULTURE

Platelets in Sepsis: An Update on Experimental Models and Clinical Data

(2019) Alice Assinger et al.   Frontiers in Immunology

Effects of dietary b-glucan, mannan oligosaccharide, Lactobacillus plantarum and their combinations on growth performance, immunity and immune related gene expression of Caspian trout, Salmo trutta caspius (Kessler, 1877)

(2019) Mohammad Javad Jami et al.   FISH & SHELLFISH IMMUNOLOGY

Extrinsic Factors and Marine Bivalve Mass Mortalities: An Overview

(2019) Tan Kar Soon et al.   JOURNAL OF SHELLFISH RESEARCH

Stress responses in fish: From molecular to evolutionary processes

(2019) Quentin Petitjean et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Overcoming Fish Defences: The Virulence Factors of Yersinia ruckeri

(2019) Agnieszka Wrobel et al.   Genes

Dysbiosis of intestinal microbiota induced by dietary oxidized fish oil and recovery of diet-induced dysbiosis via taurine supplementation in rice field eel (Monopterus albus)

(2019) Mo Peng et al.   AQUACULTURE

Microplastics in beluga whales (Delphinapterus leucas) from the Eastern Beaufort Sea

(2019) R.C. Moore et al.   MARINE POLLUTION BULLETIN

Impact of chronic exposure to trichlorfon on intestinal barrier, oxidative stress, inflammatory response and intestinal microbiome in common carp (Cyprinus carpio L.)

(2019) Xulu Chang et al.   ENVIRONMENTAL POLLUTION

Silver nanoparticles: Toxicity in model organisms as an overview of its hazard for human health and the environment

(2019) G.R. Tortella et al.   JOURNAL OF HAZARDOUS MATERIALS

Intestinal microbiota and lipid metabolism responses in the common carp ( Cyprinus carpio L.) following copper exposure

(2018) Xiao-Lin Meng et al.   ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY

Acute exposure to PBDEs at an environmentally realistic concentration causes abrupt changes in the gut microbiota and host health of zebrafish

(2018) Lianguo Chen et al.   ENVIRONMENTAL POLLUTION

Nutritional Attributes, Substitutability, Scalability, and Environmental Intensity of an Illustrative Subset of Current and Future Protein Sources for Aquaculture Feeds: Joint Consideration of Potential Synergies and Trade-offs

(2018) Nathan Pelletier et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Altered gut microbiota associated with intestinal disease in grass carp (Ctenopharyngodon idellus)

(2018) Ngoc Tuan Tran et al.   WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY

The Gut Microbiota of Marine Fish

(2018) Sian Egerton et al.   Frontiers in Microbiology

Fish Gut Microbiome: Current Approaches and Future Perspectives

(2018) Chandni Talwar et al.   INDIAN JOURNAL OF MICROBIOLOGY

Dietary Probiotic Effect of Lactococcus lactis WFLU12 on Low-Molecular-Weight Metabolites and Growth of Olive Flounder (Paralichythys olivaceus)

(2018) Thanh Luan Nguyen et al.   Frontiers in Microbiology

Effects of environmental pollutants on gut microbiota

(2017) Yuanxiang Jin et al.   ENVIRONMENTAL POLLUTION

Pathogen invasion changes the intestinal microbiota composition and induces innate immune responses in the zebrafish intestine

(2017) Hui-Ting Yang et al.   FISH & SHELLFISH IMMUNOLOGY

Fish intestinal microbiome: diversity and symbiosis unravelled by metagenomics

(2017) A.M. Tarnecki et al.   JOURNAL OF APPLIED MICROBIOLOGY

Actinomycetes benefaction role in soil and plant health

(2017) Asma Absar Bhatti et al.   MICROBIAL PATHOGENESIS

Prebiotics as functional ingredients: focus on Mediterranean fish aquaculture

(2017) Inês Guerreiro et al.   Reviews in Aquaculture

Gut Dysbiosis in Animals Due to Environmental Chemical Exposures

(2017) Cheryl S. Rosenfeld   Frontiers in Cellular and Infection Microbiology

Properties of Probiotics Kocuria SM1 and Rhodococcus SM2 Isolated from Fish Guts

(2017) S.M. Sharifuzzaman et al.   Probiotics and Antimicrobial Proteins

Effect of dietary probiotic supplementation on intestinal microbiota and physiological conditions of Nile tilapia (Oreochromis niloticus) under waterborne cadmium exposure

(2016) Qixiao Zhai et al.   ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY

Genomic characterization of symbiotic mycoplasmas from the stomach of deep-sea isopod bathynomus sp

(2016) Yong Wang et al.   ENVIRONMENTAL MICROBIOLOGY

Understanding the Fragmentation Pattern of Marine Plastic Debris

(2016) Alexandra ter Halle et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Bacterial symbiosis in the fish gut and its role in health and metabolism

(2016) Goutam Banerjee et al.   SYMBIOSIS

A new view of the fish gut microbiome: Advances from next-generation sequencing

(2015) Mahdi Ghanbari et al.   AQUACULTURE

Food Components and Irritable Bowel Syndrome

(2015) Peter R. Gibson et al.   GASTROENTEROLOGY

Phylogenetic diversity and biological activity of culturable Actinobacteria isolated from freshwater fish gut microbiota

(2015) Mansooreh Jami et al.   MICROBIOLOGICAL RESEARCH

The gut microbiota in human energy homeostasis and obesity

(2015) Michael Rosenbaum et al.   TRENDS IN ENDOCRINOLOGY AND METABOLISM

Perturbation and restoration of the fathead minnow gut microbiome after low-level triclosan exposure

(2015) Adrienne B Narrowe et al.   Microbiome

The intestinal microbiome of fish under starvation

(2014) Jun Xia et al.   BMC GENOMICS

Effects of dietary fructo-oligosaccharide supplementation on the growth performance, haemato-immunological parameters, gut microbiota and stress resistance of common carp (Cyprinus carpio) fry

(2014) Seyed Hossein Hoseinifar et al.   BRITISH JOURNAL OF NUTRITION

Prebiotics as immunostimulants in aquaculture: A review

(2014) Seong Kyu Song et al.   FISH & SHELLFISH IMMUNOLOGY

Characterization of the gut microbiota of three commercially valuable warmwater fish species

(2014) A.M. Larsen et al.   JOURNAL OF APPLIED MICROBIOLOGY

Characterization of bacterial community shift in human Ulcerative Colitis patients revealed by Illumina based 16S rRNA gene amplicon sequencing

(2014) Sandeep A Walujkar et al.   Gut Pathogens

Ingestion and transfer of microplastics in the planktonic food web

(2013) Outi Setälä et al.   ENVIRONMENTAL POLLUTION

Effects of probiotic administration on zebrafish development and reproduction

(2013) O. Carnevali et al.   GENERAL AND COMPARATIVE ENDOCRINOLOGY

Examining the Fish Microbiome: Vertebrate-Derived Bacteria as an Environmental Niche for the Discovery of Unique Marine Natural Products

(2012) Laura M. Sanchez et al.   PLoS One

Pollution in the Yangtze

(2012) H. Yang et al.   SCIENCE

Microplastics in the marine environment

(2011) Anthony L. Andrady   MARINE POLLUTION BULLETIN

Role of gastrointestinal microbiota in fish

(2010) Sukanta K Nayak   AQUACULTURE RESEARCH

Mechanisms of probiotic actions – A review

(2009) Tobias A. Oelschlaeger   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Accumulation and fragmentation of plastic debris in global environments

(2009) D. K. A. Barnes et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

A review on the interactions between gut microbiota and innate immunity of fish: Table 1

(2008) Geovanny D. Gómez et al.   FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY

Mechanical and antimicrobial properties of multilayer films with a polyethylene/silver nanocomposite layer

(2008) S. Sánchez-Valdes et al.   JOURNAL OF APPLIED POLYMER SCIENCE