Perturbation and restoration of the fathead minnow gut microbiome after low-level triclosan exposure

On the Need and Speed of Regulating Triclosan and Triclocarban in the United States

(2014) Rolf U. Halden   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Amphibian skin may select for rare environmental microbes

(2014) Jenifer B Walke et al.   ISME Journal

FDA Pushes Makers of Antimicrobial Soap to Prove Safety and Effectiveness

(2014) Bridget M. Kuehn   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Intestinal microbiota in fishes: what's known and what's not

(2014) Kendall D. Clements et al.   MOLECULAR ECOLOGY

Microbial ecology of denitrification in biological wastewater treatment

(2014) Huijie Lu et al.   WATER RESEARCH

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

Dietary differences are reflected on the gut prokaryotic community structure of wild and commercially reared sea bream (Sparus aurata)

(2014) Konstantinos A. Kormas et al.   MicrobiologyOpen

Human Infection with Shewanella putrefaciens and S. algae: Report of 16 Cases in Martinique and Review of the Literature

(2013) Nicolas Vignier et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Aquacultured Rainbow Trout (Oncorhynchus mykiss) Possess a Large Core Intestinal Microbiota That Is Resistant to Variation in Diet and Rearing Density

(2013) S. Wong et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform

(2013) James J. Kozich et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Identification of triclosan-degrading bacteria in a triclosan enrichment culture using stable isotope probing

(2013) Do Gyun Lee et al.   BIODEGRADATION

Effects of growth substrate on triclosan biodegradation potential of oxygenase-expressing bacteria

(2013) Do Gyun Lee et al.   CHEMOSPHERE

Triclosan Impairs Swimming Behavior and Alters Expression of Excitation-Contraction Coupling Proteins in Fathead Minnow (Pimephales promelas)

(2013) Erika B. Fritsch et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Gut Microbiota Contributes to the Growth of Fast-Growing Transgenic Common Carp (Cyprinus carpio L.)

(2013) Xuemei Li et al.   PLoS One

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Urinary Triclosan is Associated with Elevated Body Mass Index in NHANES

(2013) Joanna Lankester et al.   PLoS One

Network Analysis Highlights Complex Interactions between Pathogen, Host and Commensal Microbiota

(2013) Sébastien Boutin et al.   PLoS One

The Long-Term Stability of the Human Gut Microbiota

(2013) J. J. Faith et al.   SCIENCE

Restructuring of the amphibian gut microbiota through metamorphosis

(2013) Kevin D. Kohl et al.   Environmental Microbiology Reports

Microbiology and immunology of fish larvae

(2013) Olav Vadstein et al.   Reviews in Aquaculture

First isolation and characterization of Chryseobacterium shigense from rainbow trout

(2012) Leydis Zamora et al.   BMC Veterinary Research

Microbiota Regulate Intestinal Absorption and Metabolism of Fatty Acids in the Zebrafish

(2012) Ivana Semova et al.   Cell Host & Microbe

The genusShewanella: from the briny depths below to human pathogen

(2012) J. Michael Janda et al.   CRITICAL REVIEWS IN MICROBIOLOGY

Gut microbiota disturbance during antibiotic therapy: a multi-omic approach

(2012) Ana Elena Pérez-Cobas et al.   GUT

Complete Genome Sequence of Acidovorax sp. Strain KKS102, a Polychlorinated-Biphenyl Degrader

(2012) Y. Ohtsubo et al.   JOURNAL OF BACTERIOLOGY

Identification of triclosan-degrading bacteria using stable isotope probing, fluorescence in situ hybridization and microautoradiography

(2012) I. B. Lolas et al.   MICROBIOLOGY-SGM

Environmental and ecological factors that shape the gut bacterial communities of fish: a meta-analysis

(2012) KAREN E. SULLAM et al.   MOLECULAR ECOLOGY

Intestinal microbiota composition in fishes is influenced by host ecology and environment

(2012) SANDI WONG et al.   MOLECULAR ECOLOGY

Antibiotics in early life alter the murine colonic microbiome and adiposity

(2012) Ilseung Cho et al.   NATURE

Diversity, stability and resilience of the human gut microbiota

(2012) Catherine A. Lozupone et al.   NATURE

Structure, function and diversity of the healthy human microbiome

(2012)   NATURE

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

The human microbiome: ecosystem resilience and health

(2012) David A Relman   NUTRITION REVIEWS

Triclosan impairs excitation-contraction coupling and Ca2+ dynamics in striated muscle

(2012) G. Cherednichenko et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional predictions from inference and observation in sequence-based inflammatory bowel disease research

(2012) Folker Meyer et al.   GENOME BIOLOGY

DECIPHER, a Search-Based Approach to Chimera Identification for 16S rRNA Sequences

(2011) Erik S. Wright et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Effects of a dairy–yeast prebiotic and water hardness on the growth performance, mineral composition and gut microflora of fathead minnow (Pimephales promelas) in recirculating systems

(2011) Rebecca Lochmann et al.   AQUACULTURE

Demasculinization of male fish by wastewater treatment plant effluent

(2011) Alan M. Vajda et al.   AQUATIC TOXICOLOGY

PrimerProspector: de novo design and taxonomic analysis of barcoded polymerase chain reaction primers

(2011) William A. Walters et al.   BIOINFORMATICS

Evidence for a core gut microbiota in the zebrafish

(2011) Guus Roeselers et al.   ISME Journal

Impact of training sets on classification of high-throughput bacterial 16s rRNA gene surveys

(2011) Jeffrey J Werner et al.   ISME Journal

Triclosan: environmental exposure, toxicity and mechanisms of action

(2011) Andrea B. Dann et al.   JOURNAL OF APPLIED TOXICOLOGY

Detection of Deefgea chitinilytica in freshwater ornamental fish

(2011) A. Jung et al.   LETTERS IN APPLIED MICROBIOLOGY

Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.)

(2011) Maartje AHJ van Kessel et al.   AMB Express

Role of gastrointestinal microbiota in fish

(2010) Sukanta K Nayak   AQUACULTURE RESEARCH

The Genus Aeromonas: Taxonomy, Pathogenicity, and Infection

(2010) J. M. Janda et al.   CLINICAL MICROBIOLOGY REVIEWS

Effects of triclosan on soil microbial respiration

(2010) Emma Butler et al.   ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY

UniFrac: an effective distance metric for microbial community comparison

(2010) Catherine Lozupone et al.   ISME Journal

Long-term impacts of antibiotic exposure on the human intestinal microbiota

(2010) C. Jernberg et al.   MICROBIOLOGY-SGM

Microbial community resemblance methods differ in their ability to detect biologically relevant patterns

(2010) Justin Kuczynski et al.   NATURE METHODS

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Metagenomic Sequencing of an In Vitro-Simulated Microbial Community

(2010) Jenna L. Morgan et al.   PLoS One

Incomplete recovery and individualized responses of the human distal gut microbiota to repeated antibiotic perturbation

(2010) L. Dethlefsen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Succession of microbial consortia in the developing infant gut microbiome

(2010) J. E. Koenig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Gut-Associated Denitrification and In Vivo Emission of Nitrous Oxide by the Earthworm Families Megascolecidae and Lumbricidae in New Zealand

(2009) P. K. Wust et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Environmental Exposure of Aquatic and Terrestrial Biota to Triclosan and Triclocarban

(2009) Talia E. A. Chalew et al.   JOURNAL OF THE AMERICAN WATER RESOURCES ASSOCIATION

Nitrous oxide emission by aquatic macrofauna

(2009) P. Stief et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microorganisms involved in anaerobic phenol degradation in the treatment of synthetic coke-oven wastewater detected by RNA stable-isotope probing

(2008) Kazuo Sueoka et al.   FEMS MICROBIOLOGY LETTERS

Selective recruitment of bacteria during embryogenesis of an earthworm

(2008) Seana K Davidson et al.   ISME Journal

Worlds within worlds: evolution of the vertebrate gut microbiota

(2008) Ruth E. Ley et al.   NATURE REVIEWS MICROBIOLOGY