Niche differentiation of microbial community shapes vertical distribution of recalcitrant dissolved organic matter in deep-sea sediments

Data evaluation strategy for identification of key molecular formulas in dissolved organic matter as proxies for biogeochemical reactivity based on abundance differences from ultrahigh resolution mass spectrometry

(2023) Peter Herzsprung et al.   WATER RESEARCH

Phylogenetic divergence and adaptation of Nitrososphaeria across lake depths and freshwater ecosystems

(2022) Minglei Ren et al.   ISME Journal

Characterization of dissolved organic matter processing between surface sediment porewater and overlying bottom water in the Yangtze River Estuary

(2022) Yuping Zhou et al.   WATER RESEARCH

Metagenomic evidence for the microbial transformation of carboxyl-rich alicyclic molecules: A long-term macrocosm experiment

(2022) Changfei He et al.   WATER RESEARCH

Increased microbial and substrate complexity result in higher molecular diversity of the dissolved organic matter pool

(2022) Qi Chen et al.   LIMNOLOGY AND OCEANOGRAPHY

Application of Fourier transform ion cyclotron resonance mass spectrometry in molecular characterization of dissolved organic matter

(2022) Chen He et al.   Science China-Earth Sciences

Experimental Insight into the Enigmatic Persistence of Marine Refractory Dissolved Organic Matter

(2022) Xiaoxuan Zheng et al.   Environmental Science & Technology

Non-negligible roles of archaea in coastal carbon biogeochemical cycling

(2022) Xinxu Zhang et al.   TRENDS IN MICROBIOLOGY

Comprehensive understanding of DOM reactivity in anaerobic fermentation of persulfate-pretreated sewage sludge via FT-ICR mass spectrometry and reactomics analysis

(2022) Jibao Liu et al.   WATER RESEARCH

Microbial transformation of distinct exogenous substrates into analogous composition of recalcitrant dissolved organic matter

(2021) Jie Lian et al.   ENVIRONMENTAL MICROBIOLOGY

A vertically and temporally diverse bacterial community in a shallow lake-water sediment site of a eutrophic lake

(2021) Stefanos Moschos et al.   Inland Waters

Hydrological management affected dissolved organic matter chemistry and organic carbon burial in the Three Gorges Reservoir

(2021) Kai Wang et al.   WATER RESEARCH

Pangenomics Analysis Reveals Diversification of Enzyme Families and Niche Specialization in Globally Abundant SAR202 Bacteria

(2020) Jimmy H. W. Saw et al.   mBio

In-House Standard Method for Molecular Characterization of Dissolved Organic Matter by FT-ICR Mass Spectrometry

(2020) Chen He et al.   ACS Omega

Biological composition and microbial dynamics of sinking particulate organic matter at abyssal depths in the oligotrophic open ocean

(2019) Dominique Boeuf et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Proteomic Response of Three Marine Ammonia-Oxidizing Archaea to Hydrogen Peroxide and Their Metabolic Interactions with a Heterotrophic Alphaproteobacterium

(2019) Barbara Bayer et al.   mSystems

Ammonia‐oxidizing archaea release a suite of organic compounds potentially fueling prokaryotic heterotrophy in the ocean

(2019) Barbara Bayer et al.   ENVIRONMENTAL MICROBIOLOGY

Microbial Processing of Sediment‐Derived Dissolved Organic Matter: Implications for Its Subsequent Biogeochemical Cycling in Overlying Seawater

(2019) Ruanhong Cai et al.   Journal of Geophysical Research-Biogeosciences

Ecology and evolution of seafloor and subseafloor microbial communities

(2018) William D. Orsi   NATURE REVIEWS MICROBIOLOGY

Growth of sedimentaryBathyarchaeotaon lignin as an energy source

(2018) Tiantian Yu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Estimation of different source contributions to sediment organic matter in an agricultural-forested watershed using end member mixing analyses based on stable isotope ratios and fluorescence spectroscopy

(2018) Morgane Derrien et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Extensive processing of sediment pore water dissolved organic matter during anoxic incubation as observed by high-field mass spectrometry (FTICR-MS)

(2018) Juliana Valle et al.   WATER RESEARCH

Mobilization of ferrihydrite-associated organic carbon during Fe reduction: Adsorption versus coprecipitation

(2018) Lanfang Han et al.   CHEMICAL GEOLOGY

Molecular Insights into the Transformation of Dissolved Organic Matter in Landfill Leachate Concentrate during Biodegradation and Coagulation Processes Using ESI FT-ICR MS

(2017) Ziwen Yuan et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Unraveling signatures of biogeochemical processes and the depositional setting in the molecular composition of pore water DOM across different marine environments

(2017) Frauke Schmidt et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Molecular properties of deep-sea dissolved organic matter are predictable by the central limit theorem: Evidence from tandem FT-ICR-MS

(2017) Maren Zark et al.   MARINE CHEMISTRY

Thermal subsidence and sedimentary processes in the South China Sea Basin

(2017) Ying Cao et al.   MARINE GEOLOGY

High field FT-ICR mass spectrometry data sets enlighten qualitative DOM alteration in lake sediment porewater profiles

(2017) Peter Herzsprung et al.   ORGANIC GEOCHEMISTRY

Hypoxia causes preservation of labile organic matter and changes seafloor microbial community composition (Black Sea)

(2017) Gerdhard L. Jessen et al.   Science Advances

Preservation of organic matter in marine sediments by inner-sphere interactions with reactive iron

(2017) Andrew Barber et al.   Scientific Reports

Evolution of microbial community along with increasing solid concentration during high-solids anaerobic digestion of sewage sludge

(2016) Can Liu et al.   BIORESOURCE TECHNOLOGY

Seasonal dynamics of dissolved, particulate and microbial components of a tidal saltmarsh-dominated estuary under contrasting levels of freshwater discharge

(2016) Thais B. Bittar et al.   ESTUARINE COASTAL AND SHELF SCIENCE

Reconstructing metabolic pathways of hydrocarbon-degrading bacteria from the Deepwater Horizon oil spill

(2016) Nina Dombrowski et al.   Nature Microbiology

The contentious nature of soil organic matter

(2015) Johannes Lehmann et al.   NATURE

From mass to structure: an aromaticity index for high-resolution mass data of natural organic matter

(2015) B. P. Koch et al.   RAPID COMMUNICATIONS IN MASS SPECTROMETRY

Biogeochemistry of dissolved organic matter in an anoxic intertidal creek bank

(2014) Michael Seidel et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Extending the analytical window for water-soluble organic matter in sediments by aqueous Soxhlet extraction

(2014) Frauke Schmidt et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Quantifying the degradation of organic matter in marine sediments: A review and synthesis

(2013) Sandra Arndt et al.   EARTH-SCIENCE REVIEWS

Dissolved organic carbon dynamics in anaerobic sediments of the Santa Monica Basin

(2013) Tomoko Komada et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Bacteria Contribute to Sediment Nutrient Release and Reflect Progressed Eutrophication-Driven Hypoxia in an Organic-Rich Continental Sea

(2013) Hanna Sinkko et al.   PLoS One

Molecular Fractionation of Dissolved Organic Matter with Metal Salts

(2012) Thomas Riedel et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Organic matter distribution in the modern sediments of the Pearl River Estuary

(2012) David J. Strong et al.   ORGANIC GEOCHEMISTRY

Recalcitrant Dissolved Organic Carbon Fractions

(2011) Dennis A. Hansell   Annual Review of Marine Science

Diagenetic Transformation of Dissolved Organic Nitrogen Compounds under Contrasting Sedimentary Redox Conditions in the Black Sea

(2011) Frauke Schmidt et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Characterizing dissolved organic matter fluorescence with parallel factor analysis: a tutorial

(2011) Colin A. Stedmon et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Carbon and nitrogen assimilation in deep subseafloor microbial cells

(2011) Y. Morono et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Optical characterization of dissolved organic matter in tropical rivers of the Guayana Shield, Venezuela

(2010) Youhei Yamashita et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Microbial production of recalcitrant dissolved organic matter: long-term carbon storage in the global ocean

(2010) Nianzhi Jiao et al.   NATURE REVIEWS MICROBIOLOGY

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Molecular characterization of dissolved organic matter in pore water of continental shelf sediments

(2009) Frauke Schmidt et al.   GEOCHIMICA ET COSMOCHIMICA ACTA

Increasing pH drives organic matter solubilization from wetland soils under reducing conditions

(2009) Malgorzata Grybos et al.   GEODERMA

Properties of fluorescent dissolved organic matter in the Gironde Estuary

(2009) A. Huguet et al.   ORGANIC GEOCHEMISTRY

Major viral impact on the functioning of benthic deep-sea ecosystems

(2008) Roberto Danovaro et al.   NATURE