Proteomic Response of Three Marine Ammonia-Oxidizing Archaea to Hydrogen Peroxide and Their Metabolic Interactions with a Heterotrophic Alphaproteobacterium

SignalP 5.0 improves signal peptide predictions using deep neural networks

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Nitrosopumilus adriaticus sp. nov. and Nitrosopumilus piranensis sp. nov., two ammonia-oxidizing archaea from the Adriatic Sea and members of the class Nitrososphaeria

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Genome and epigenome of a novel marine Thaumarchaeota strain suggest viral infection, phosphorothioation DNA modification and multiple restriction systems

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Nitrosopumilus maritimus gen. nov., sp. nov., Nitrosopumilus cobalaminigenes sp. nov., Nitrosopumilus oxyclinae sp. nov., and Nitrosopumilus ureiphilus sp. nov., four marine ammonia-oxidizing archaea of the phylum Thaumarchaeota

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Cultivation and characterization of Candidatus Nitrosocosmicus exaquare, an ammonia-oxidizing archaeon from a municipal wastewater treatment system

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Influence of oxygen availability on the activities of ammonia-oxidizing archaea

(2017) Wei Qin et al.   Environmental Microbiology Reports

Zooming in on the phycosphere: the ecological interface for phytoplankton–bacteria relationships

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The CopC Family: Structural and Bioinformatic Insights into a Diverse Group of Periplasmic Copper Binding Proteins

(2016) Thomas J. Lawton et al.   BIOCHEMISTRY

Measurement of dark, particle-generated superoxide and hydrogen peroxide production and decay in the subtropical and temperate North Pacific Ocean

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Proteomics and comparative genomics ofNitrososphaera viennensisreveal the core genome and adaptations of archaeal ammonia oxidizers

(2016) Melina Kerou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hydrogen peroxide detoxification is a key mechanism for growth of ammonia-oxidizing archaea

(2016) Jong-Geol Kim et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A hydrophobic ammonia-oxidizing archaeon of theNitrosocosmicusclade isolated from coal tar-contaminated sediment

(2016) Man-Young Jung et al.   Environmental Microbiology Reports

Single-molecule imaging of UvrA and UvrB recruitment to DNA lesions in living Escherichia coli

(2016) Mathew Stracy et al.   Nature Communications

Endogenous hydrogen peroxide increases biofilm formation by inducing exopolysaccharide production in Acinetobacter oleivorans DR1

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Physiological and genomic characterization of two novel marine thaumarchaeal strains indicates niche differentiation

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Comparative analysis of statistical methods used for detecting differential expression in label-free mass spectrometry proteomics

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The Phyre2 web portal for protein modeling, prediction and analysis

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Reference sequence (RefSeq) database at NCBI: current status, taxonomic expansion, and functional annotation

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Genomic and proteomic characterization of “CandidatusNitrosopelagicus brevis”: An ammonia-oxidizing archaeon from the open ocean

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Turning points in the evolution of peroxidase–catalase superfamily: molecular phylogeny of hybrid heme peroxidases

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Investigation of bacterial nucleotide excision repair using single-molecule techniques

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Genomes of Two New Ammonia-Oxidizing Archaea Enriched from Deep Marine Sediments

(2014) Soo-Je Park et al.   PLoS One

Genome Sequence of Candidatus Nitrososphaera evergladensis from Group I.1b Enriched from Everglades Soil Reveals Novel Genomic Features of the Ammonia-Oxidizing Archaea

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Marine ammonia-oxidizing archaeal isolates display obligate mixotrophy and wide ecotypic variation

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Transcriptional Response of the Archaeal Ammonia Oxidizer Nitrosopumilus maritimus to Low and Environmentally Relevant Ammonia Concentrations

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Single-cell genomics shedding light on marine Thaumarchaeota diversification

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Exopolysaccharides from Sinorhizobium meliloti Can Protect against H2O2-Dependent Damage

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Fenton-like copper redox chemistry revisited: Hydrogen peroxide and superoxide mediation of copper-catalyzed oxidant production

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Continuous hydrogen peroxide production by organic buffers in phytoplankton culture media

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Haloferax volcaniiarchaeosortase is required for motility, mating, and C-terminal processing of the S-layer glycoprotein

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The molecular mechanisms and physiological consequences of oxidative stress: lessons from a model bacterium

(2013) James A. Imlay   NATURE REVIEWS MICROBIOLOGY

Mononuclear Iron Enzymes Are Primary Targets of Hydrogen Peroxide Stress

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Microbial oceanography of anoxic oxygen minimum zones

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The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss

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DNA-, rRNA- and mRNA-based stable isotope probing of aerobic methanotrophs in lake sediment

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Dependence of the Cyanobacterium Prochlorococcus on Hydrogen Peroxide Scavenging Microbes for Growth at the Ocean's Surface

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Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil

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Activity, abundance and diversity of nitrifying archaea and bacteria in the central California Current

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Coordination of frontline defense mechanisms under severe oxidative stress

(2010) Amardeep Kaur et al.   Molecular Systems Biology

Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota

(2010) Anja Spang et al.   TRENDS IN MICROBIOLOGY

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

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Something Old, Something New, Something Borrowed; How the Thermoacidophilic Archaeon Sulfolobus solfataricus Responds to Oxidative Stress

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The radiocarbon signature of microorganisms in the mesopelagic ocean

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Cellular Defenses against Superoxide and Hydrogen Peroxide

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Facilitation of Robust Growth of Prochlorococcus Colonies and Dilute Liquid Cultures by "Helper" Heterotrophic Bacteria

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SAR11 marine bacteria require exogenous reduced sulphur for growth

(2008) H. James Tripp et al.   NATURE

Mesophilic crenarchaeota: proposal for a third archaeal phylum, the Thaumarchaeota

(2008) Céline Brochier-Armanet et al.   NATURE REVIEWS MICROBIOLOGY

Prediction of signal peptides in archaea

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