Identification of circRNA-miRNA-mRNA network as biomarkers for interstitial cystitis/bladder pain syndrome

The functional roles of the circRNA/Wnt axis in cancer

(2022) Chen Xue et al.   Molecular Cancer

The emerging roles of IFIT3 in antiviral innate immunity and cellular biology

(2022) Wentao Zhang et al.   JOURNAL OF MEDICAL VIROLOGY

CircTHBS1 facilitates the progression of interstitial cystitis depending on the regulation of miR ‐139‐5p/ MFN2 axis

(2021) Chen Jiang et al.   DRUG DEVELOPMENT RESEARCH

Integrated mRNA-miRNA transcriptome analysis of bladder biopsies from patients with bladder pain syndrome identifies signaling alterations contributing to the disease pathogenesis

(2021) Ali Hashemi Gheinani et al.   BMC Urology

Long Non-coding RNAs and Circular RNAs: Insights Into Microglia and Astrocyte Mediated Neurological Diseases

(2021) Miaomiao Chen et al.   Frontiers in Molecular Neuroscience

MicroRNA-34c-5p provokes isoprenaline-induced cardiac hypertrophy by modulating autophagy via targeting ATG4B

(2021) Yuhong Zhang et al.   Acta Pharmaceutica Sinica B

Down‐regulation of circDMNT3B is conducive to intestinal mucosal permeability dysfunction of rats with sepsis via sponging miR‐20b‐5p

(2020) Jiao Liu et al.   JOURNAL OF CELLULAR AND MOLECULAR MEDICINE

LPS‐mediated release of ATP from urothelial cells occurs by lysosomal exocytosis

(2020) Andrew Silberfeld et al.   NEUROUROLOGY AND URODYNAMICS

Lnc2Cancer 3.0: an updated resource for experimentally supported lncRNA/circRNA cancer associations and web tools based on RNA-seq and scRNA-seq data

(2020) Yue Gao et al.   NUCLEIC ACIDS RESEARCH

Hunner lesion versus non‐Hunner lesion interstitial cystitis/bladder pain syndrome

(2019) Kristene E Whitmore et al.   INTERNATIONAL JOURNAL OF UROLOGY

Analysis of key genes and micro-RNA-mRNA regulatory networks in women with ulcerative interstitial cystitis/pain bladder syndrome

(2018) Shengzhuo Liu et al.   INTERNATIONAL UROGYNECOLOGY JOURNAL

Inhibition of microRNA-132 attenuates inflammatory response and detrusor fibrosis in rats with interstitial cystitis via the JAK-STAT signaling pathway

(2018) Ya-Jun Song et al.   JOURNAL OF CELLULAR BIOCHEMISTRY

Circular RNA in cardiovascular disease

(2018) M-Ashraf Altesha et al.   JOURNAL OF CELLULAR PHYSIOLOGY

Altered Expression Profile of Circular RNAs in the Serum of Patients with Diabetic Retinopathy Revealed by Microarray

(2017) Yonghao Gu et al.   OPHTHALMIC RESEARCH

The STRING database in 2017: quality-controlled protein–protein association networks, made broadly accessible

(2016) Damian Szklarczyk et al.   NUCLEIC ACIDS RESEARCH

Non-coding RNAs in Development and Disease: Background, Mechanisms, and Therapeutic Approaches

(2016) Julia Beermann et al.   PHYSIOLOGICAL REVIEWS

Diagnosis and Treatment of Interstitial Cystitis/Bladder Pain Syndrome: AUA Guideline Amendment

(2015) Philip M. Hanno et al.   JOURNAL OF UROLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

CircInteractome: A web tool for exploring circular RNAs and their interacting proteins and microRNAs

(2015) Dawood B. Dudekula et al.   RNA Biology

CIRI: an efficient and unbiased algorithm for de novo circular RNA identification

(2015) Yuan Gao et al.   GENOME BIOLOGY

miRDB: an online resource for microRNA target prediction and functional annotations

(2014) Nathan Wong et al.   NUCLEIC ACIDS RESEARCH

Natural RNA circles function as efficient microRNA sponges

(2013) Thomas B. Hansen et al.   NATURE

Circular RNAs are a large class of animal RNAs with regulatory potency

(2013) Sebastian Memczak et al.   NATURE

miRBase: annotating high confidence microRNAs using deep sequencing data

(2013) Ana Kozomara et al.   NUCLEIC ACIDS RESEARCH

The UEA sRNA workbench: a suite of tools for analysing and visualizing next generation sequencing microRNA and small RNA datasets

(2012) M. B. Stocks et al.   BIOINFORMATICS

Circular RNAs are abundant, conserved, and associated with ALU repeats

(2012) W. R. Jeck et al.   RNA

Prevalence of Symptoms of Bladder Pain Syndrome/Interstitial Cystitis Among Adult Females in the United States

(2011) Sandra H. Berry et al.   JOURNAL OF UROLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Mapping and quantifying mammalian transcriptomes by RNA-Seq

(2008) Ali Mortazavi et al.   NATURE METHODS