An integrated single-cell transcriptomic dataset for non-small cell lung cancer

Single-cell analysis reveals prognostic fibroblast subpopulations linked to molecular and immunological subtypes of lung cancer

(2023) Christopher J. Hanley et al.   Nature Communications

Unraveling B cell trajectories at single cell resolution

(2022) Dhakshayini Morgan et al.   TRENDS IN IMMUNOLOGY

UCHL1 acts as a potential oncogene and affects sensitivity of common anti-tumor drugs in lung adenocarcinoma

(2022) Jianbo Yao et al.   World Journal of Surgical Oncology

Macrophage diversity in cancer revisited in the era of single-cell omics

(2022) Ruo-Yu Ma et al.   TRENDS IN IMMUNOLOGY

Molecular profiling of human non-small cell lung cancer by single-cell RNA-seq

(2022) Qingqing Li et al.   Genome Medicine

High-resolution single-cell atlas reveals diversity and plasticity of tissue-resident neutrophils in non-small cell lung cancer

(2022) Stefan Salcher et al.   CANCER CELL

Cancer Statistics, 2021

(2021) Rebecca L. Siegel et al.   CA-A CANCER JOURNAL FOR CLINICIANS

Identification of small proline‐rich protein 1B ( SPRR1B ) as a prognostically predictive biomarker for lung adenocarcinoma by integrative bioinformatic analysis

(2021) Zihe Zhang et al.   Thoracic Cancer

Single‐cell RNA sequencing in cancer research

(2021) Yijie Zhang et al.   JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH

Flexible comparison of batch correction methods for single-cell RNA-seq using BatchBench

(2021) Ruben Chazarra-Gil et al.   NUCLEIC ACIDS RESEARCH

Exhausted CD8+T Cells in the Tumor Immune Microenvironment: New Pathways to Therapy

(2021) Weiqin Jiang et al.   Frontiers in Immunology

Single-cell profiling of tumor heterogeneity and the microenvironment in advanced non-small cell lung cancer

(2021) Fengying Wu et al.   Nature Communications

Identification of a targetable KRAS-mutant epithelial population in non-small cell lung cancer

(2021) Giorgia Maroni et al.   Communications Biology

Integrated Single-Cell Atlas of Endothelial Cells of the Human Lung

(2021) Jonas C. Schupp et al.   CIRCULATION

TFF-1 Functions to Suppress Multiple Phenotypes Associated with Lung Cancer Progression

(2021) Kentaro Minegishi et al.   OncoTargets and Therapy

Interpretation of T cell states from single-cell transcriptomics data using reference atlases

(2021) Massimo Andreatta et al.   Nature Communications

Lung adenocarcinoma and lung squamous cell carcinoma cancer classification, biomarker identification, and gene expression analysis using overlapping feature selection methods

(2021) Joe W. Chen et al.   Scientific Reports

LAMC2 promotes the proliferation of cancer cells and induce infiltration of macrophages in non-small cell lung cancer

(2021) Meiyuan Liu et al.   Annals of Translational Medicine

TP53 and CDKN2A mutations in patients with early-stage lung squamous cell carcinoma: an analysis of the correlations and prognostic outcomes

(2021) Peiyuan Wang et al.   Annals of Translational Medicine

Three subtypes of lung cancer fibroblasts define distinct therapeutic paradigms

(2021) Haichuan Hu et al.   CANCER CELL

Ferroptosis-related gene AKR1C1 predicts the prognosis of non-small cell lung cancer

(2021) Fangfang Huang et al.   Cancer Cell International

Dissecting the Oncogenic Roles of Keratin 17 in the Hallmarks of Cancer

(2021) Gabriella Baraks et al.   CANCER RESEARCH

Benchmarking atlas-level data integration in single-cell genomics

(2021) Malte D. Luecken et al.   NATURE METHODS

Early lung carcinogenesis and tumor microenvironment observed by single-cell transcriptome analysis

(2021) Eun Young Kim et al.   Translational Oncology

CDKN2A loss-of-function predicts immunotherapy resistance in non-small cell lung cancer

(2021) Stanley I. Gutiontov et al.   Scientific Reports

Single-Cell Transcriptomic Analysis of Peripheral Blood Reveals a Novel B-Cell Subset in Renal Allograft Recipients With Accommodation

(2021) Quan Zhuang et al.   Frontiers in Pharmacology

The role of ferroptosis in lung cancer

(2021) Sikai Wu et al.   Biomarker Research

An Integrated Gene Expression Landscape Profiling Approach to Identify Lung Tumor Endothelial Cell Heterogeneity and Angiogenic Candidates

(2020) Jermaine Goveia et al.   CANCER CELL

Analysis of the Expression of Cell Division Cycle-Associated Genes and Its Prognostic Significance in Human Lung Carcinoma: A Review of the Literature Databases

(2020) Chongxiang Chen et al.   Biomed Research International

CXCL1 as an Unfavorable Prognosis Factor Negatively Regulated by DACH1 in Non-small Cell Lung Cancer

(2020) Shengnan Yu et al.   Frontiers in Oncology

Single-cell RNA sequencing demonstrates the molecular and cellular reprogramming of metastatic lung adenocarcinoma

(2020) Nayoung Kim et al.   Nature Communications

Single‐Cell RNA Sequencing for Precision Oncology: Current State-of-Art

(2020) Justine Jia Wen Seow et al.   JOURNAL OF THE INDIAN INSTITUTE OF SCIENCE

ECT2 promotes lung adenocarcinoma progression through extracellular matrix dynamics and focal adhesion signaling

(2020) Zeinab Kosibaty et al.   CANCER SCIENCE

Alveolar progenitor cells and the origin of lung cancer

(2020) J. Sainz de Aja et al.   JOURNAL OF INTERNAL MEDICINE

A molecular cell atlas of the human lung from single-cell RNA sequencing

(2020) Kyle J. Travaglini et al.   NATURE

The single-cell transcriptional landscape of mammalian organogenesis

(2019) Junyue Cao et al.   NATURE

Single-Cell Transcriptomics of Human and Mouse Lung Cancers Reveals Conserved Myeloid Populations across Individuals and Species

(2019) Rapolas Zilionis et al.   IMMUNITY

Comprehensive Integration of Single-Cell Data

(2019) Tim Stuart et al.   CELL

Cancer-associated fibroblasts: an emerging target of anti-cancer immunotherapy

(2019) Tongyan Liu et al.   Journal of Hematology & Oncology

Fast, sensitive and accurate integration of single-cell data with Harmony

(2019) Ilya Korsunsky et al.   NATURE METHODS

Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease

(2019) Peter A. Szabo et al.   Nature Communications

Integrating single-cell transcriptomic data across different conditions, technologies, and species

(2018) Andrew Butler et al.   NATURE BIOTECHNOLOGY

Phenotype molding of stromal cells in the lung tumor microenvironment

(2018) Diether Lambrechts et al.   NATURE MEDICINE

Immune Prophets of Lung Cancer: The Prognostic and Predictive Landscape of Cellular and Molecular Immune Markers

(2018) Ivana Catacchio et al.   Translational Oncology

Dysfunctional CD8 T Cells Form a Proliferative, Dynamically Regulated Compartment within Human Melanoma

(2018) Hanjie Li et al.   CELL

High-Dimensional Single-Cell Analysis Identifies Organ-Specific Signatures and Conserved NK Cell Subsets in Humans and Mice

(2018) Adeline Crinier et al.   IMMUNITY

Oxidative Stress Gene Expression Profile Correlates with Cancer Patient Poor Prognosis: Identification of Crucial Pathways Might Select Novel Therapeutic Approaches

(2017) Alessandra Leone et al.   Oxidative Medicine and Cellular Longevity

Mutations in TP53 increase the risk of SOX2 copy number alterations and silencing of TP53 reduces SOX2 expression in non-small cell lung cancer

(2016) Johanna Samulin Erdem et al.   BMC CANCER

Activation ofSAT1engages polyamine metabolism with p53-mediated ferroptotic responses

(2016) Yang Ou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Tumor-Derived CXCL1 Promotes Lung Cancer Growth via Recruitment of Tumor-Associated Neutrophils

(2016) Ming Yuan et al.   Journal of Immunology Research

Regulator of G-Protein Signaling 5 Prevents Smooth Muscle Cell Proliferation and Attenuates Neointima FormationSignificance

(2015) Jan-Marcus Daniel et al.   ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY

LAMC2 enhances the metastatic potential of lung adenocarcinoma

(2015) Y W Moon et al.   CELL DEATH AND DIFFERENTIATION

Spatial reconstruction of single-cell gene expression data

(2015) Rahul Satija et al.   NATURE BIOTECHNOLOGY

Smooth muscle-selective CPI-17 expression increases vascular smooth muscle contraction and blood pressure

(2013) Wen Su et al.   AMERICAN JOURNAL OF PHYSIOLOGY-HEART AND CIRCULATORY PHYSIOLOGY

Smoking-Induced CXCL14 Expression in the Human Airway Epithelium Links Chronic Obstructive Pulmonary Disease to Lung Cancer

(2013) Renat Shaykhiev et al.   AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY

Tissue-resident macrophages

(2013) Luke C Davies et al.   NATURE IMMUNOLOGY

PERP gene therapy attenuates lung cancer xenograft via inducing apoptosis and suppressing VEGF

(2012) Ke Chen et al.   CANCER BIOLOGY & THERAPY

NCBI GEO: archive for functional genomics data sets—update

(2012) Tanya Barrett et al.   NUCLEIC ACIDS RESEARCH

The Macrophage Cholesterol Exporter ABCA1 Functions as an Anti-inflammatory Receptor

(2009) Chongren Tang et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

IL-7 Receptor Expression Provides the Potential for Long-Term Survival of Both CD62Lhigh Central Memory T Cells and Th1 Effector Cells during Leishmania major Infection

(2009) S. L. Colpitts et al.   JOURNAL OF IMMUNOLOGY

mRNA-Seq whole-transcriptome analysis of a single cell

(2009) Fuchou Tang et al.   NATURE METHODS