Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease
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Title
Single-cell transcriptomics of human T cells reveals tissue and activation signatures in health and disease
Authors
Keywords
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Journal
Nature Communications
Volume 10, Issue 1, Pages -
Publisher
Springer Science and Business Media LLC
Online
2019-10-17
DOI
10.1038/s41467-019-12464-3
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Note: Only part of the references are listed.- De novo gene signature identification from single‐cell RNA‐seq with hierarchical Poisson factorization
- (2019) Hanna Mendes Levitin et al. Molecular Systems Biology
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- (2019) Laura M. McLane et al. Annual Review of Immunology
- Efficient integration of heterogeneous single-cell transcriptomes using Scanorama
- (2019) Brian Hie et al. NATURE BIOTECHNOLOGY
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- Human T Cell Development, Localization, and Function throughout Life
- (2018) Brahma V. Kumar et al. IMMUNITY
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- (2018) Jonathan A Griffiths et al. Molecular Systems Biology
- Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors
- (2018) Laleh Haghverdi et al. NATURE BIOTECHNOLOGY
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- (2018) David Zemmour et al. NATURE IMMUNOLOGY
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- (2018) Diether Lambrechts et al. NATURE MEDICINE
- scmap: projection of single-cell RNA-seq data across data sets
- (2018) Vladimir Yu Kiselev et al. NATURE METHODS
- Detection and removal of barcode swapping in single-cell RNA-seq data
- (2018) Jonathan A. Griffiths et al. Nature Communications
- Human Lymph Nodes Maintain TCF-1hiMemory T Cells with High Functional Potential and Clonal Diversity throughout Life
- (2018) Michelle Miron et al. JOURNAL OF IMMUNOLOGY
- Single-cell transcriptome analysis of lineage diversity in high-grade glioma
- (2018) Jinzhou Yuan et al. Genome Medicine
- Dysfunctional CD8 T Cells Form a Proliferative, Dynamically Regulated Compartment within Human Melanoma
- (2018) Hanjie Li et al. CELL
- Defining T Cell States Associated with Response to Checkpoint Immunotherapy in Melanoma
- (2018) Moshe Sade-Feldman et al. CELL
- Lineage tracking reveals dynamic relationships of T cells in colorectal cancer
- (2018) Lei Zhang et al. NATURE
- Deep generative modeling for single-cell transcriptomics
- (2018) Romain Lopez et al. NATURE METHODS
- Virus-inclusive single-cell RNA sequencing reveals the molecular signature of progression to severe dengue
- (2018) Fabio Zanini et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Multi-Omics Profiling of the Tumor Microenvironment: Paving the Way to Precision Immuno-Oncology
- (2018) Francesca Finotello et al. Frontiers in Oncology
- Dendritic Cells Display Subset and Tissue-Specific Maturation Dynamics over Human Life
- (2017) Tomer Granot et al. IMMUNITY
- CD49a Expression Defines Tissue-Resident CD8 + T Cells Poised for Cytotoxic Function in Human Skin
- (2017) Stanley Cheuk et al. IMMUNITY
- Lung CD4 Tissue-Resident Memory T Cells Mediate Adaptive Immunity Induced by Previous Infection of Mice withBordetella pertussis
- (2017) Mieszko M. Wilk et al. JOURNAL OF IMMUNOLOGY
- Single-cell sequencing reveals dissociation-induced gene expression in tissue subpopulations
- (2017) Susanne C van den Brink et al. NATURE METHODS
- Single-cell transcriptomics to explore the immune system in health and disease
- (2017) Michael J. T. Stubbington et al. SCIENCE
- Human Tissue-Resident Memory T Cells Are Defined by Core Transcriptional and Functional Signatures in Lymphoid and Mucosal Sites
- (2017) Brahma V. Kumar et al. Cell Reports
- Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics
- (2016) Karthik Shekhar et al. CELL
- Transcriptional Landscape of Human Tissue Lymphocytes Unveils Uniqueness of Tumor-Infiltrating T Regulatory Cells
- (2016) Marco De Simone et al. IMMUNITY
- HOPX: The Unusual Homeodomain-Containing Protein
- (2016) Anita Mariotto et al. JOURNAL OF INVESTIGATIVE DERMATOLOGY
- Programs for the persistence, vigilance and control of human CD8+ lung-resident memory T cells
- (2016) Pleun Hombrink et al. NATURE IMMUNOLOGY
- PD-1+ and follicular helper T cells are responsible for persistent HIV-1 transcription in treated aviremic individuals
- (2016) Riddhima Banga et al. NATURE MEDICINE
- Hobit and Blimp1 instruct a universal transcriptional program of tissue residency in lymphocytes
- (2016) L. K. Mackay et al. SCIENCE
- Anti–Programmed Cell Death (PD)-1 Immunotherapy for Malignant Tumor: A Systematic Review and Meta-Analysis
- (2016) Ran Chen et al. Translational Oncology
- CD4+ T Cells Expressing PD-1, TIGIT and LAG-3 Contribute to HIV Persistence during ART
- (2016) Rémi Fromentin et al. PLoS Pathogens
- Data-Driven Phenotypic Dissection of AML Reveals Progenitor-like Cells that Correlate with Prognosis
- (2015) Jacob H. Levine et al. CELL
- The transcription factors ZEB2 and T-bet cooperate to program cytotoxic T cell terminal differentiation in response to LCMV viral infection
- (2015) Claudia X. Dominguez et al. JOURNAL OF EXPERIMENTAL MEDICINE
- Early-life compartmentalization of human T cell differentiation and regulatory function in mucosal and lymphoid tissues
- (2015) Joseph J C Thome et al. NATURE MEDICINE
- Nivolumab in Previously Untreated Melanoma without BRAF Mutation
- (2015) Caroline Robert et al. NEW ENGLAND JOURNAL OF MEDICINE
- The future of immune checkpoint therapy
- (2015) P. Sharma et al. SCIENCE
- Interferon-Stimulated Genes: A Complex Web of Host Defenses
- (2014) William M. Schneider et al. Annual Review of Immunology
- Spatial Map of Human T Cell Compartmentalization and Maintenance over Decades of Life
- (2014) Joseph J.C. Thome et al. CELL
- Tissue-Resident Memory T Cells
- (2014) Jason M. Schenkel et al. IMMUNITY
- Resident memory CD8 T cells trigger protective innate and adaptive immune responses
- (2014) J. M. Schenkel et al. SCIENCE
- The developmental pathway for CD103+CD8+ tissue-resident memory T cells of skin
- (2013) Laura K Mackay et al. NATURE IMMUNOLOGY
- Helper T cell diversity and plasticity
- (2012) Shingo Nakayamada et al. CURRENT OPINION IN IMMUNOLOGY
- Distribution and Compartmentalization of Human Circulating and Tissue-Resident Memory T Cell Subsets
- (2012) Taheri Sathaliyawala et al. IMMUNITY
- CD8+ T Cells: Foot Soldiers of the Immune System
- (2011) Nu Zhang et al. IMMUNITY
- Cutting Edge: Tissue-Retentive Lung Memory CD4 T Cells Mediate Optimal Protection to Respiratory Virus Infection
- (2011) J. R. Teijaro et al. JOURNAL OF IMMUNOLOGY
- T cell exhaustion
- (2011) E John Wherry NATURE IMMUNOLOGY
- Learning about the functions of NME/NM23: lessons from knockout mice to silencing strategies
- (2011) Mathieu Boissan et al. NAUNYN-SCHMIEDEBERGS ARCHIVES OF PHARMACOLOGY
- Interferon-stimulated genes and their antiviral effector functions
- (2011) John W Schoggins et al. Current Opinion in Virology
- IL-21 and TGF-β are required for differentiation of human TH17 cells
- (2008) Li Yang et al. NATURE
- Coregulation of CD8+ T cell exhaustion by multiple inhibitory receptors during chronic viral infection
- (2008) Shawn D Blackburn et al. NATURE IMMUNOLOGY
- CTLA-4 blockade enhances polyfunctional NY-ESO-1 specific T cell responses in metastatic melanoma patients with clinical benefit
- (2008) J. Yuan et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
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