Effects of Conformational Constraint on Peptide Solubility Limits

Thermodynamic Compensation in Peptides Following Liquid–Liquid Phase Separation

(2021) Riley J. Workman et al.   JOURNAL OF PHYSICAL CHEMISTRY B

The (un)structural biology of biomolecular liquid-liquid phase separation using NMR spectroscopy

(2020) Anastasia C. Murthy et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Model for disordered proteins with strongly sequence-dependent liquid phase behavior

(2020) Antonia Statt et al.   JOURNAL OF CHEMICAL PHYSICS

Physical Chemistry of the Protein Backbone: Enabling the Mechanisms of Intrinsic Protein Disorder

(2020) Justin A. Drake et al.   JOURNAL OF PHYSICAL CHEMISTRY B

The Role of Liquid–Liquid Phase Separation in the Compartmentalization of Cell Nucleus and Spatial Genome Organization

(2020) S. V. Razin et al.   BIOCHEMISTRY-MOSCOW

Liquid-Liquid Phase Separation in Neuronal Development and Synaptic Signaling

(2020) Xiandeng Wu et al.   DEVELOPMENTAL CELL

Dehydration entropy drives liquid-liquid phase separation by molecular crowding

(2020) Sohee Park et al.   Communications Chemistry

Liquid–Liquid Phase Separation in Disease

(2019) Simon Alberti et al.   Annual Review of Genetics

Thermodynamics of Conformational Transitions in a Disordered Protein Backbone Model

(2018) Justin A. Drake et al.   BIOPHYSICAL JOURNAL

PDB2ENTROPY and PDB2TRENT: Conformational and Translational–Rotational Entropy from Molecular Ensembles

(2018) Federico Fogolari et al.   Journal of Chemical Information and Modeling

Peptide Solubility Limits: Backbone and Side-Chain Interactions

(2018) Rahul Sarma et al.   JOURNAL OF PHYSICAL CHEMISTRY B

Sequence determinants of protein phase behavior from a coarse-grained model

(2018) Gregory L. Dignon et al.   PLoS Computational Biology

Relation between single-molecule properties and phase behavior of intrinsically disordered proteins

(2018) Gregory L. Dignon et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Controllable protein phase separation and modular recruitment to form responsive membraneless organelles

(2018) Benjamin S. Schuster et al.   Nature Communications

Physical Chemistry of Cellular Liquid Phase Separation

(2018) Emily P. Bentley et al.   CHEMISTRY-A EUROPEAN JOURNAL

Intrinsically Disordered Proteome of Human Membrane-Less Organelles

(2017) April L. Darling et al.   PROTEOMICS

Phase Separation: Linking Cellular Compartmentalization to Disease

(2016) Adriano Aguzzi et al.   TRENDS IN CELL BIOLOGY

ff14SB: Improving the Accuracy of Protein Side Chain and Backbone Parameters from ff99SB

(2015) James A. Maier et al.   Journal of Chemical Theory and Computation

Force field-dependent solution properties of glycine oligomers

(2015) Justin A. Drake et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

Tudor Staphylococcal Nuclease Links Formation of Stress Granules and Processing Bodies with mRNA Catabolism in Arabidopsis

(2015) Emilio Gutierrez-Beltran et al.   PLANT CELL

Protein collapse driven against solvation free energy without H-bonds

(2015) Deepti Karandur et al.   PROTEIN SCIENCE

Liquid-Liquid Phase Separation in Biology

(2014) Anthony A. Hyman et al.   Annual Review of Cell and Developmental Biology

Controlling entropy to tune the functions of intrinsically disordered regions

(2014) Tilman Flock et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

Solubility and Aggregation of Gly5 in Water

(2014) Deepti Karandur et al.   JOURNAL OF PHYSICAL CHEMISTRY B

The ensemble nature of allostery

(2014) Hesam N. Motlagh et al.   NATURE

Altered Ribostasis: RNA-Protein Granules in Degenerative Disorders

(2013) Mani Ramaswami et al.   CELL

Multisteric Regulation by Structural Disorder in Modular Signaling Proteins: An Extension of the Concept of Allostery

(2013) Peter Tompa   CHEMICAL REVIEWS

PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data

(2013) Daniel R. Roe et al.   Journal of Chemical Theory and Computation

The dark energy of proteins comes to light: conformational entropy and its role in protein function revealed by NMR relaxation

(2012) A Joshua Wand   CURRENT OPINION IN STRUCTURAL BIOLOGY

Revisiting the Nucleolus: From Marker to Dynamic Integrator of Cancer Signaling

(2012) D. Ruggero   Science Signaling

Backbone-Driven Collapse in Unfolded Protein Chains

(2011) Daniel P. Teufel et al.   JOURNAL OF MOLECULAR BIOLOGY

Peptide Conformational Preferences in Osmolyte Solutions: Transfer Free Energies of Decaalanine

(2011) Hironori Kokubo et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Statistical thermodynamics of liquid-liquid phase separation in ternary systems during complex coacervation

(2010) Nisha Pawar et al.   PHYSICAL REVIEW E

PACKMOL: A package for building initial configurations for molecular dynamics simulations

(2009) L. Martínez et al.   JOURNAL OF COMPUTATIONAL CHEMISTRY

TrimethylamineN-oxide influence on the backbone of proteins: An oligoglycine model

(2009) Char Y. Hu et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Role of Backbone−Solvent Interactions in Determining Conformational Equilibria of Intrinsically Disordered Proteins

(2008) Hoang T. Tran et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Structural thermodynamics of protein preferential solvation: Osmolyte solvation of proteins, aminoacids, and peptides

(2008) Matthew Auton et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS