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(2022) Karl Alex Hedin et al.   Scientific Reports

Characterization of Kazachstania slooffiae, a Proposed Commensal in the Porcine Gut

(2021) Katie Lynn Summers et al.   Journal of Fungi

Transient antibiotic-induced changes in the neonatal swine intestinal microbiota impact islet expression profiles reducing subsequent function

(2021) Carla Sosa Alvarado et al.   AMERICAN JOURNAL OF PHYSIOLOGY-REGULATORY INTEGRATIVE AND COMPARATIVE PHYSIOLOGY

The pig as a model for immunology research

(2020) Reinhard Pabst   CELL AND TISSUE RESEARCH

Interaction between microbiota and immunity in health and disease

(2020) Danping Zheng et al.   CELL RESEARCH

Temporal Dynamics of the Gut Bacteriome and Mycobiome in the Weanling Pig

(2020) Ann M. Arfken et al.   Microorganisms

Antibiotics create a shift from mutualism to competition in human gut communities with a longer-lasting impact on fungi than bacteria

(2020) Bastian Seelbinder et al.   Microbiome

Dietary supplementation of weaned piglets with a yeast-derived mannan-rich fraction modulates cecal microbial profiles, jejunal morphology and gene expression

(2019) J. M. Fouhse et al.   Animal

The Piglet Mycobiome During the Weaning Transition: A Pilot Study

(2019) Katie L Summers et al.   JOURNAL OF ANIMAL SCIENCE

Preliminary Study: Depriving Piglets of Maternal Feces for the First Seven Days Post-Partum Changes Piglet Physiology and Performance before and after Weaning

(2019) Edgar O. Aviles-Rosa et al.   Animals

Yeast fermentate prebiotic improves intestinal barrier integrity during heat stress by modulation of the gut microbiota in rats

(2019) H.A.G. Ducray et al.   JOURNAL OF APPLIED MICROBIOLOGY

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Neonatal Exposure to Amoxicillin Alters Long-Term Immune Response Despite Transient Effects on Gut-Microbiota in Piglets

(2019) Janelle M. Fouhse et al.   Frontiers in Immunology

Antibiotic-induced gut metabolome and microbiome alterations increase the susceptibility to Candida albicans colonization in the gastrointestinal tract

(2019) Daniel Gutierrez et al.   FEMS MICROBIOLOGY ECOLOGY

Yeasts of Burden: Exploring the Mycobiome–Bacteriome of the Piglet GI Tract

(2019) Ann M. Arfken et al.   Frontiers in Microbiology

Amoxicillin-current use in swine medicine

(2018) D. G. S. Burch et al.   JOURNAL OF VETERINARY PHARMACOLOGY AND THERAPEUTICS

Reviewing the WHO guidelines for antibiotic use for sepsis in neonates and children

(2018) Aline Fuchs et al.   Paediatrics and International Child Health

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Development of the Human Mycobiome over the First Month of Life and across Body Sites

(2018) Tonya L. Ward et al.   mSystems

Temporal development of the gut microbiome in early childhood from the TEDDY study

(2018) Christopher J. Stewart et al.   NATURE

Porcine intestinal yeast species, Kazachstania slooffiae , a new potential protein source with favourable amino acid composition for animals

(2017) V. Urubschurov et al.   JOURNAL OF ANIMAL PHYSIOLOGY AND ANIMAL NUTRITION

Prevalence and determinants of antibiotic exposure in infants: A population-derived Australian birth cohort study

(2017) Hayley Anderson et al.   JOURNAL OF PAEDIATRICS AND CHILD HEALTH

Early gut mycobiota and mother-offspring transfer

(2017) Kasper Schei et al.   Microbiome

Early life antibiotic exposure affects pancreatic islet development and metabolic regulation

(2017) Jiaying Li et al.   Scientific Reports

Basic Genetics and Immunology of Candida Infections

(2016) Xiaowen Wang et al.   INFECTIOUS DISEASE CLINICS OF NORTH AMERICA

The microbiome in early life: implications for health outcomes

(2016) Sabrina Tamburini et al.   NATURE MEDICINE

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(2016) Benjamin J Callahan et al.   NATURE METHODS

Longitudinal study of the early-life fecal and nasal microbiotas of the domestic pig

(2015) Mackenzie Jonathan Slifierz et al.   BMC MICROBIOLOGY

Development and Evaluation of qPCR Assay for Quantitation of Kazachstania slooffiae and Total Yeasts Occurring in the Porcine Gut

(2015) Vladimir Urubschurov et al.   CURRENT MICROBIOLOGY

Antibiotics in Early Life Alter the Gut Microbiome and Increase Disease Incidence in a Spontaneous Mouse Model of Autoimmune Insulin-Dependent Diabetes

(2015) Sophie Candon et al.   PLoS One

Systemic antibiotic prescribing to paediatric outpatients in 5 European countries: a population-based cohort study

(2014) Jakob Holstiege et al.   BMC Pediatrics

Common harms from amoxicillin: a systematic review and meta-analysis of randomized placebo-controlled trials for any indication

(2014) Malcolm Gillies et al.   CANADIAN MEDICAL ASSOCIATION JOURNAL

Role of the Microbiota in Immunity and Inflammation

(2014) Yasmine Belkaid et al.   CELL

Recent Trends in Outpatient Antibiotic Use in Children

(2014) L. E. Vaz et al.   PEDIATRICS

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(2013) Sanne P. Smeekens et al.   EMBO Molecular Medicine

Antibiotic exposure in the first two years of life and development of asthma and other allergic diseases by 7.5 yr: A dose-dependent relationship

(2013) Lauren Hoskin-Parr et al.   PEDIATRIC ALLERGY AND IMMUNOLOGY

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Candida albicans and Bacterial Microbiota Interactions in the Cecum during Recolonization following Broad-Spectrum Antibiotic Therapy

(2012) Katie L. Mason et al.   INFECTION AND IMMUNITY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Antibiotic Exposure and IBD Development Among Children: A Population-Based Cohort Study

(2012) M. P. Kronman et al.   PEDIATRICS

Variation in Candida albicans EFG1 Expression Enables Host-Dependent Changes in Colonizing Fungal Populations

(2012) J. V. Pierce et al.   mBio

A human gut microbial gene catalogue established by metagenomic sequencing

(2010) Junjie Qin et al.   NATURE

Biological diversity of yeasts in the gastrointestinal tract of weaned piglets kept under different farm conditions

(2009) Vladimir Urubschurov et al.   FEMS YEAST RESEARCH

Vertical and Horizontal Transmission of Candida albicans in Very Low Birth Weight Infants Using DNA Fingerprinting Techniques

(2009) Joseph M. Bliss et al.   PEDIATRIC INFECTIOUS DISEASE JOURNAL