An evolutionary view on thylakoid protein phosphorylation uncovers novel phosphorylation hotspots with potential functional implications

Learning the Languages of the Chloroplast: Retrograde Signaling and Beyond

(2016) Kai Xun Chan et al.   Annual Review of Plant Biology

Excitation energy transfer between Light-harvesting complex II and Photosystem I in reconstituted membranes

(2016) Parveen Akhtar et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Phosphorylation of plastoglobular proteins inArabidopsis thaliana

(2016) Jens N. Lohscheider et al.   JOURNAL OF EXPERIMENTAL BOTANY

Protein phosphorylation in chloroplasts – a survey of phosphorylation targets

(2016) Sacha Baginsky   JOURNAL OF EXPERIMENTAL BOTANY

Novel connections in plant organellar signalling link different stress responses and signalling pathways

(2016) Przemyslaw Kmiecik et al.   JOURNAL OF EXPERIMENTAL BOTANY

PETO Interacts with Other Effectors of Cyclic Electron Flow in Chlamydomonas

(2016) Hiroko Takahashi et al.   Molecular Plant

The reduced state of the plastoquinone pool is required for chloroplast-mediated stomatal closure in response to calcium stimulation

(2016) Wen-Hua Wang et al.   PLANT JOURNAL

Activation of the Stt7/STN7 Kinase through Dynamic Interactions with the Cytochromeb6fComplex

(2016) Alexey Shapiguzov et al.   PLANT PHYSIOLOGY

Structure and Energy Transfer in Photosystems of Oxygenic Photosynthesis

(2015) Nathan Nelson et al.   Annual Review of Biochemistry

ATP Synthase

(2015) Wolfgang Junge et al.   Annual Review of Biochemistry

The Structure of Photosystem II and the Mechanism of Water Oxidation in Photosynthesis

(2015) Jian-Ren Shen   Annual Review of Plant Biology

The specific localizations of phosphorylated Lhcb1 and Lhcb2 isoforms reveal the role of Lhcb2 in the formation of the PSI-LHCII supercomplex in Arabidopsis during state transitions

(2015) Aurelie Crepin et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Calcium-dependent regulation of photosynthesis

(2015) Ana Karina Hochmal et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Light-harvesting II antenna trimers connect energetically the entire photosynthetic machinery — including both photosystems II and I

(2015) Michele Grieco et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

The arabidopsis information resource: Making and mining the “gold standard” annotated reference plant genome

(2015) Tanya Z. Berardini et al.   GENESIS

Quantitative Phosphoproteomics of the Ataxia Telangiectasia-Mutated (ATM) and Ataxia Telangiectasia-Mutated and Rad3-related (ATR) Dependent DNA Damage Response inArabidopsis thaliana

(2015) Elisabeth Roitinger et al.   MOLECULAR & CELLULAR PROTEOMICS

Regulation of Photosynthesis during Abiotic Stress-Induced Photoinhibition

(2015) Mayank Anand Gururani et al.   Molecular Plant

Changes in the Phosphoproteome and Metabolome link Early Signaling Events to Rearrangement of Photosynthesis and Central Metabolism in Salinity and Oxidative Stress Response in Arabidopsis

(2015) Yanmei Chen et al.   PLANT PHYSIOLOGY

Phosphorylation of the Lhcb2 isoform of Light Harvesting Complex II is central to state transitions

(2015) Paolo Longoni et al.   PLANT PHYSIOLOGY

On the Extent of Tyrosine Phosphorylation in Chloroplasts

(2015) Qintao Lu et al.   PLANT PHYSIOLOGY

STATE TRANSITION7-Dependent Phosphorylation Is Modulated by Changing Environmental Conditions, and Its Absence Triggers Remodeling of Photosynthetic Protein Complexes

(2015) Sonja Verena Bergner et al.   PLANT PHYSIOLOGY

In Vivo Identification of Photosystem II Light Harvesting Complexes Interacting with PHOTOSYSTEM II SUBUNIT S

(2015) Caterina Gerotto et al.   PLANT PHYSIOLOGY

Plant innate immunity – sunny side up?

(2015) Simon Stael et al.   TRENDS IN PLANT SCIENCE

Large-scale analysis of the evolutionary histories of phosphorylation motifs in the human genome

(2015) Hisayoshi Yoshizaki et al.   GigaScience

An intact light harvesting complex I antenna system is required for complete state transitions in Arabidopsis

(2015) Samuel L. Benson et al.   Nature Plants

Chloroplasts play a central role in plant defence and are targeted by pathogen effectors

(2015) Marta de Torres Zabala et al.   Nature Plants

Regulation and Dynamics of the Light-Harvesting System

(2014) Jean-David Rochaix   Annual Review of Plant Biology

Evolutionary Development of Redox Regulation in Chloroplasts

(2014) Monica Balsera et al.   ANTIOXIDANTS & REDOX SIGNALING

The Arabidopsis Kinome: phylogeny and evolutionary insights into functional diversification

(2014) Monika Zulawski et al.   BMC GENOMICS

Regulation of Photochemical Energy Transfer Accompanied by Structural Changes in Thylakoid Membranes of Heat-Stressed Wheat

(2014) Yoko Marutani et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Identification and characterization of chloroplast casein kinase II from Oryza sativa (rice)

(2014) Qingtao Lu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Photosynthetic complex stoichiometry dynamics in higher plants: biogenesis, function, and turnover of ATP synthase and the cytochrome b6f complex

(2014) Mark Aurel Schöttler et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Global Phosphoproteome ofChlamydomonas reinhardtiiReveals Complex Organellar Phosphorylation in the Flagella and Thylakoid Membrane

(2014) Hongxia Wang et al.   MOLECULAR & CELLULAR PROTEOMICS

Higher Plant Proteins of Cyanobacterial Origin: Are They or Are They Not Preferentially Targeted to Chloroplasts?

(2014) Roman G. Bayer et al.   Molecular Plant

Meta-Analysis of Arabidopsis thaliana Phospho-Proteomics Data Reveals Compartmentalization of Phosphorylation Motifs

(2014) K. J. van Wijk et al.   PLANT CELL

The Light-Harvesting Chlorophyll a/b Binding Proteins Lhcb1 and Lhcb2 Play Complementary Roles during State Transitions in Arabidopsis

(2014) M. Pietrzykowska et al.   PLANT CELL

Light-dependent reversible phosphorylation of the minor photosystem II antenna Lhcb6 (CP24) occurs in lycophytes

(2014) Lorenzo Ferroni et al.   PLANT JOURNAL

Consequences of state transitions on the structural and functional organization of Photosystem I in the green algaChlamydomonas reinhardtii

(2014) Bartlomiej Drop et al.   PLANT JOURNAL

High Light-Dependent Phosphorylation of Photosystem II Inner Antenna CP29 in Monocots Is STN7 Independent and Enhances Nonphotochemical Quenching

(2014) Nico Betterle et al.   PLANT PHYSIOLOGY

The cytochrome b6f complex at the crossroad of photosynthetic electron transport pathways

(2014) Alexander N. Tikhonov   PLANT PHYSIOLOGY AND BIOCHEMISTRY

State transitions inChlamydomonas reinhardtiistrongly modulate the functional size of photosystem II but not of photosystem I

(2014) Caner Ünlü et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

dbPPT: a comprehensive database of protein phosphorylation in plants

(2014) Han Cheng et al.   Database-The Journal of Biological Databases and Curation

Phosphorylation ofArabidopsistransketolase at Ser428provides a potential paradigm for the metabolic control of chloroplast carbon metabolism

(2013) Agostinho G. Rocha et al.   BIOCHEMICAL JOURNAL

LHCII is an antenna of both photosystems after long-term acclimation

(2013) Emilie Wientjes et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Light-harvesting complex II (LHCII) and its supramolecular organization in Chlamydomonas reinhardtii

(2013) Bartlomiej Drop et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

During State 1 to State 2 Transition inArabidopsis thaliana, the Photosystem II Supercomplex Gets Phosphorylated but Does Not Disassemble

(2013) Emilie Wientjes et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Light- and Metabolism-related Regulation of the Chloroplast ATP Synthase Has Distinct Mechanisms and Functions

(2013) Kaori Kohzuma et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The significance of CP29 reversible phosphorylation in thylakoids of higher plants under environmental stresses

(2013) Yang-Er Chen et al.   JOURNAL OF EXPERIMENTAL BOTANY

Stable Isotope Metabolic Labeling-based Quantitative Phosphoproteomic Analysis of Arabidopsis Mutants Reveals Ethylene-regulated Time-dependent Phosphoproteins and Putative Substrates of Constitutive Triple Response 1 Kinase

(2013) Zhu Yang et al.   MOLECULAR & CELLULAR PROTEOMICS

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

P3DB 3.0: From plant phosphorylation sites to protein networks

(2013) Qiuming Yao et al.   NUCLEIC ACIDS RESEARCH

The evolution of the ribosome biogenesis pathway from a yeast perspective

(2013) Ingo Ebersberger et al.   NUCLEIC ACIDS RESEARCH

A Dual Strategy to Cope with High Light in Chlamydomonas reinhardtii

(2013) G. Allorent et al.   PLANT CELL

Loss-of-function of OsSTN8 suppresses the photosystem II core protein phosphorylation and interferes with the photosystem II repair mechanism in rice (Oryza sativa)

(2013) Krishna Nath et al.   PLANT JOURNAL

Comparative cross-linking and mass spectrometry of an intact F-type ATPase suggest a role for phosphorylation

(2013) Carla Schmidt et al.   Nature Communications

Systematic Functional Prioritization of Protein Posttranslational Modifications

(2012) Pedro Beltrao et al.   CELL

Chloroplast-localized protein kinases: a step forward towards a complete inventory

(2012) Roman G. Bayer et al.   JOURNAL OF EXPERIMENTAL BOTANY

Phosphoproteome Dynamics Upon Changes in Plant Water Status Reveal Early Events Associated With Rapid Growth Adjustment in Maize Leaves

(2012) Ludovic Bonhomme et al.   MOLECULAR & CELLULAR PROTEOMICS

Molecular Crosstalk Between PAMP-Triggered Immunity and Photosynthesis

(2012) Vera Göhre et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Functional Analyses of the Plant Photosystem I-Light-Harvesting Complex II Supercomplex Reveal That Light-Harvesting Complex II Loosely Bound to Photosystem II Is a Very Efficient Antenna for Photosystem I in State II

(2012) P. Galka et al.   PLANT CELL

Steady-State Phosphorylation of Light-Harvesting Complex II Proteins Preserves Photosystem I under Fluctuating White Light

(2012) M. Grieco et al.   PLANT PHYSIOLOGY

Architectural switch in plant photosynthetic membranes induced by light stress

(2012) M. Herbstova et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Calcium-dependent regulation of cyclic photosynthetic electron transfer by a CAS, ANR1, and PGRL1 complex

(2012) M. Terashima et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

ABC1K atypical kinases in plants: filling the organellar kinase void

(2012) Peter K. Lundquist et al.   TRENDS IN PLANT SCIENCE

Signal integration by chloroplast phosphorylation networks: an update

(2012) Anna Schönberg et al.   Frontiers in Plant Science

A Mechanism for the Evolution of Phosphorylation Sites

(2011) Samuel M. Pearlman et al.   CELL

Cross-talk between calcium signalling and protein phosphorylation at the thylakoid

(2011) Simon Stael et al.   JOURNAL OF EXPERIMENTAL BOTANY

Plant organellar calcium signalling: an emerging field

(2011) Simon Stael et al.   JOURNAL OF EXPERIMENTAL BOTANY

Eukaryote-Like Serine/Threonine Kinases and Phosphatases in Bacteria

(2011) S. F. F. Pereira et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The Arabidopsis Information Resource (TAIR): improved gene annotation and new tools

(2011) Philippe Lamesch et al.   NUCLEIC ACIDS RESEARCH

The Chloroplast Calcium Sensor CAS Is Required for Photoacclimation inChlamydomonas reinhardtii

(2011) Dimitris Petroutsos et al.   PLANT CELL

High Light Induced Disassembly of Photosystem II Supercomplexes in Arabidopsis Requires STN7-Dependent Phosphorylation of CP29

(2011) Rikard Fristedt et al.   PLoS One

Comparative phosphoproteome profiling reveals a function of the STN8 kinase in fine-tuning of cyclic electron flow (CEF)

(2011) S. Reiland et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A structural phylogenetic map for chloroplast photosynthesis

(2011) John F. Allen et al.   TRENDS IN PLANT SCIENCE

The Language of Calcium Signaling

(2010) Antony N. Dodd et al.   Annual Review of Plant Biology

Dynamics of reversible protein phosphorylation in thylakoids of flowering plants: The roles of STN7, STN8 and TAP38

(2010) Paolo Pesaresi et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Effect of Antenna-Depletion in Photosystem II on Excitation Energy Transfer in Arabidopsis thaliana

(2010) Bart van Oort et al.   BIOPHYSICAL JOURNAL

The PPH1 phosphatase is specifically involved in LHCII dephosphorylation and state transitions in Arabidopsis

(2010) A. Shapiguzov et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Role of Plastid Protein Phosphatase TAP38 in LHCII Dephosphorylation and Thylakoid Electron Flow

(2010) Mathias Pribil et al.   PLOS BIOLOGY

Phosphorylation of Photosynthetic Antenna Protein CP29 and Photosystem II Structure Changes in Monocotyledonous Plants under Environmental Stresses

(2009) Yang-Er Chen et al.   BIOCHEMISTRY

Dephosphorylation of photosystem II proteins and phosphorylation of CP29 in barley photosynthetic membranes as a response to water stress

(2009) Wen-Juan Liu et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

HaMStR: Profile hidden markov model based search for orthologs in ESTs

(2009) Ingo Ebersberger et al.   BMC EVOLUTIONARY BIOLOGY

PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update

(2009) Pawel Durek et al.   NUCLEIC ACIDS RESEARCH

Phosphorylation of Photosystem II Controls Functional Macroscopic Folding of Photosynthetic Membranes in Arabidopsis

(2009) R. Fristedt et al.   PLANT CELL

Dynamic Plastid Redox Signals Integrate Gene Expression and Metabolism to Induce Distinct Metabolic States in Photosynthetic Acclimation in Arabidopsis

(2009) K. Brautigam et al.   PLANT CELL

Thylakoid Protein Phosphorylation in Higher Plant Chloroplasts Optimizes Electron Transfer under Fluctuating Light

(2009) M. Tikkanen et al.   PLANT PHYSIOLOGY

Large-Scale Arabidopsis Phosphoproteome Profiling Reveals Novel Chloroplast Kinase Substrates and Phosphorylation Networks

(2009) S. Reiland et al.   PLANT PHYSIOLOGY

Weak functional constraints on phosphoproteomes

(2009) Christian R. Landry et al.   TRENDS IN GENETICS

Analysis of the Chloroplast Protein Kinase Stt7 during State Transitions

(2009) Sylvain Lemeille et al.   PLOS BIOLOGY

The Dynamics of Photosynthesis

(2008) Stephan Eberhard et al.   Annual Review of Genetics

Plastid Evolution

(2008) Sven B. Gould et al.   Annual Review of Plant Biology

Core protein phosphorylation facilitates the repair of photodamaged photosystem II at high light

(2008) Mikko Tikkanen et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Determination of the excitation migration time in Photosystem II

(2008) Koen Broess et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Light regulation of CaS, a novel phosphoprotein in the thylakoid membrane of Arabidopsis thaliana

(2008) Julia P. Vainonen et al.   FEBS Journal

A plastid protein crucial for Ca2-regulated stomatal responses

(2008) Stefan Weinl et al.   NEW PHYTOLOGIST

P3DB: a plant protein phosphorylation database

(2008) J. Gao et al.   NUCLEIC ACIDS RESEARCH

D1-protein dynamics in photosystem II: the lingering enigma

(2008) Marvin Edelman et al.   PHOTOSYNTHESIS RESEARCH

Molecular Remodeling of Photosystem II during State Transitions in Chlamydomonas reinhardtii

(2008) M. Iwai et al.   PLANT CELL

Eukaryotic-like protein kinases in the prokaryotes and the myxobacterial kinome

(2008) J. Perez et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA