The Arabidopsis Kinome: phylogeny and evolutionary insights into functional diversification

Kinannote, a computer program to identify and classify members of the eukaryotic protein kinase superfamily

(2013) Jonathan M. Goldberg et al.   BIOINFORMATICS

Sensing the environment: key roles of membrane-localized kinases in plant perception and response to abiotic stress

(2013) Yuriko Osakabe et al.   JOURNAL OF EXPERIMENTAL BOTANY

Convergent gene loss following gene and genome duplications creates single-copy families in flowering plants

(2013) R. De Smet et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

SUBA3: a database for integrating experimentation and prediction to define the SUBcellular location of proteins in Arabidopsis

(2012) Sandra K. Tanz et al.   NUCLEIC ACIDS RESEARCH

PhosPhAt goes kinases—searchable protein kinase target information in the plant phosphorylation site database PhosPhAt

(2012) Monika Zulawski et al.   NUCLEIC ACIDS RESEARCH

MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity

(2012) Y. Wang et al.   NUCLEIC ACIDS RESEARCH

Genome-wide analysis of lectin receptor-like kinase family from Arabidopsis and rice

(2012) Neha Vaid et al.   PLANT MOLECULAR BIOLOGY

A Comprehensive Dataset of Genes with a Loss-of-Function Mutant Phenotype in Arabidopsis

(2012) J. Lloyd et al.   PLANT PHYSIOLOGY

Genome-Wide Identification and Analysis of MAPK and MAPKK Gene Families in Brachypodium distachyon

(2012) Lihong Chen et al.   PLoS One

ABC1K atypical kinases in plants: filling the organellar kinase void

(2012) Peter K. Lundquist et al.   TRENDS IN PLANT SCIENCE

Selection-Driven Divergence After Gene Duplication in Arabidopsis thaliana

(2011) Toni I. Gossmann et al.   JOURNAL OF MOLECULAR EVOLUTION

The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

(2011) Tina T Hu et al.   NATURE GENETICS

A Role for Plant AURORA Kinases in Formative Cell Division

(2011) Nancy R. Hofmann   PLANT CELL

Different Gene Families in Arabidopsis thaliana Transposed in Different Epochs and at Different Frequencies throughout the Rosids

(2011) M. R. Woodhouse et al.   PLANT CELL

A member of the mitogen-activated protein 3-kinase family is involved in the regulation of plant vacuolar glucose uptake

(2011) Karina Wingenter et al.   PLANT JOURNAL

Accelerated Profile HMM Searches

(2011) Sean R. Eddy   PLoS Computational Biology

A quantitative mass spectrometry-based approach for identifying protein kinase clients and quantifying kinase activity

(2010) Yadong Huang et al.   ANALYTICAL BIOCHEMISTRY

phangorn: phylogenetic analysis in R

(2010) Klaus Peter Schliep   BIOINFORMATICS

Proteome-wide survey of phosphorylation patterns affected by nuclear DNA polymorphisms in Arabidopsis thaliana

(2010) Diego Riaño-Pachón et al.   BMC GENOMICS

Bias in Plant Gene Content Following Different Sorts of Duplication: Tandem, Whole-Genome, Segmental, or by Transposition

(2009) Michael Freeling   Annual Review of Plant Biology

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update

(2009) Pawel Durek et al.   NUCLEIC ACIDS RESEARCH

BIN2 Functions Redundantly with Other Arabidopsis GSK3-Like Kinases to Regulate Brassinosteroid Signaling

(2009) Z. Yan et al.   PLANT PHYSIOLOGY

The flowering world: a tale of duplications

(2009) Yves Van de Peer et al.   TRENDS IN PLANT SCIENCE

ArabidopsisMAPKs: a complex signalling network involved in multiple biological processes

(2008) Jean Colcombet et al.   BIOCHEMICAL JOURNAL

The plant WNK gene family and regulation of flowering time inArabidopsis

(2008) Y. Wang et al.   PLANT BIOLOGY

Arabidopsis Casein Kinase 1-Like 6 Contains a Microtubule-Binding Domain and Affects the Organization of Cortical Microtubules

(2008) G. Ben-Nissan et al.   PLANT PHYSIOLOGY

Finding and Comparing Syntenic Regions among Arabidopsis and the Outgroups Papaya, Poplar, and Grape: CoGe with Rosids

(2008) E. Lyons et al.   PLANT PHYSIOLOGY

High-Quality Binary Protein Interaction Map of the Yeast Interactome Network

(2008) H. Yu et al.   SCIENCE