Microbial Community Composition of the Antarctic Ecosystems: Review of the Bacteria, Fungi, and Archaea Identified through an NGS-Based Metagenomics Approach
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Title
Microbial Community Composition of the Antarctic Ecosystems: Review of the Bacteria, Fungi, and Archaea Identified through an NGS-Based Metagenomics Approach
Authors
Keywords
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Journal
Life-Basel
Volume 12, Issue 6, Pages 916
Publisher
MDPI AG
Online
2022-06-19
DOI
10.3390/life12060916
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Note: Only part of the references are listed.- Fungi Present in Antarctic Deep-Sea Sediments Assessed Using DNA Metabarcoding
- (2021) Mayara Baptistucci Ogaki et al. MICROBIAL ECOLOGY
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- (2021) Tiago Rodrigues e Silva et al. CRITICAL REVIEWS IN BIOTECHNOLOGY
- Microbial Community Structure Driven by a Volcanic Gradient in Glaciers of the Antarctic Archipelago South Shetland
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- Diversity of Fungi Present in Permafrost in the South Shetland Islands, Maritime Antarctic
- (2021) Thamar Holanda da Silva et al. MICROBIAL ECOLOGY
- 16S rRNA gene and 18S rRNA gene diversity in microbial mat communities in meltwater ponds on the McMurdo Ice Shelf, Antarctica
- (2021) Eleanor E. Jackson et al. POLAR BIOLOGY
- Diversity, Ecological Role and Biotechnological Potential of Antarctic Marine Fungi
- (2021) Stefano Varrella et al. Journal of Fungi
- Fungi in the Antarctic Cryosphere: Using DNA Metabarcoding to Reveal Fungal Diversity in Glacial Ice from the Antarctic Peninsula Region
- (2021) Graciéle Cunha Alves de Menezes et al. MICROBIAL ECOLOGY
- Airborne bacterial community diversity, source and function along the Antarctic Coast
- (2020) Yue Cao et al. SCIENCE OF THE TOTAL ENVIRONMENT
- DNA metabarcoding of fungal diversity in air and snow of Livingston Island, South Shetland Islands, Antarctica
- (2020) Luiz Henrique Rosa et al. Scientific Reports
- Spatial Variability of Antarctic Surface Snow Bacterial Communities
- (2019) Lucie A. Malard et al. Frontiers in Microbiology
- Microbial diversity of an Antarctic subglacial community and high‐resolution replicate sampling inform hydrological connectivity in a polar desert
- (2019) Richard Campen et al. ENVIRONMENTAL MICROBIOLOGY
- Source Environments of the Microbiome in Perennially Ice-Covered Lake Untersee, Antarctica
- (2019) Klemens Weisleitner et al. Frontiers in Microbiology
- Bacterioplankton Community Composition Along Environmental Gradients in Lakes From Byers Peninsula (Maritime Antarctica) as Determined by Next-Generation Sequencing
- (2019) Antonio Picazo et al. Frontiers in Microbiology
- Influence of Environmental Drivers and Potential Interactions on the Distribution of Microbial Communities From Three Permanently Stratified Antarctic Lakes
- (2019) Wei Li et al. Frontiers in Microbiology
- Biomarker Profiling of Microbial Mats in the Geothermal Band of Cerro Caliente, Deception Island (Antarctica): Life at the Edge of Heat and cold
- (2019) María Ángeles Lezcano et al. ASTROBIOLOGY
- The Biodiversity and Geochemistry of Cryoconite Holes in Queen Maud Land, East Antarctica
- (2019) Stefanie Lutz et al. Microorganisms
- Taxonomic and functional characterization of a microbial community from a volcanic englacial ecosystem in Deception Island, Antarctica
- (2019) Emma Martinez-Alonso et al. Scientific Reports
- Fungal and bacterial diversity of Svalbard subglacial ice
- (2019) L. Perini et al. Scientific Reports
- Spatiotemporal dynamics of marine bacterial and archaeal communities in surface waters off the northern Antarctic Peninsula
- (2018) Camila N. Signori et al. DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY
- Scaling up: A guide to high-throughput genomic approaches for biodiversity analysis
- (2018) Teresita M. Porter et al. MOLECULAR ECOLOGY
- Diversity of key genes for carbon and nitrogen fixation in soils from the Sør Rondane Mountains, East Antarctica
- (2018) Guillaume Tahon et al. POLAR BIOLOGY
- A Mosaic of Geothermal and Marine Features Shapes Microbial Community Structure on Deception Island Volcano, Antarctica
- (2018) Amanda G. Bendia et al. Frontiers in Microbiology
- Climate change drives expansion of Antarctic ice-free habitat
- (2017) Jasmine R. Lee et al. NATURE
- Microbial Communities and Their Predicted Metabolic Functions in Growth Laminae of a Unique Large Conical Mat from Lake Untersee, East Antarctica
- (2017) Hyunmin Koo et al. Frontiers in Microbiology
- Microbial Diversity of Browning Peninsula, Eastern Antarctica Revealed Using Molecular and Cultivation Methods
- (2017) Sarita Pudasaini et al. Frontiers in Microbiology
- Global Diversity of Desert Hypolithic Cyanobacteria
- (2017) Donnabella C. Lacap-Bugler et al. Frontiers in Microbiology
- High Prevalence of Gammaproteobacteria in the Sediments of Admiralty Bay and North Bransfield Basin, Northwestern Antarctic Peninsula
- (2017) Diego C. Franco et al. Frontiers in Microbiology
- Biogeochemical and Microbial Variation across 5500 km of Antarctic Surface Sediment Implicates Organic Matter as a Driver of Benthic Community Structure
- (2016) Deric R. Learman et al. Frontiers in Microbiology
- Metagenomic Analysis of Bacterial Communities of Antarctic Surface Snow
- (2016) Anna Lopatina et al. Frontiers in Microbiology
- Taxonomic and Functional Diversity of Soil and Hypolithic Microbial Communities in Miers Valley, McMurdo Dry Valleys, Antarctica
- (2016) Sean T. S. Wei et al. Frontiers in Microbiology
- Microbial Community Structure of Subglacial Lake Whillans, West Antarctica
- (2016) Amanda M. Achberger et al. Frontiers in Microbiology
- Geological connectivity drives microbial community structure and connectivity in polar, terrestrial ecosystems
- (2015) Belinda C. Ferrari et al. ENVIRONMENTAL MICROBIOLOGY
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- (2015) Stephen D. J. Archer et al. POLAR BIOLOGY
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- (2015) Mukan Ji et al. POLAR BIOLOGY
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- (2014) Stephen D.J. Archer et al. FEMS MICROBIOLOGY ECOLOGY
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- (2013) Trista J Vick-Majors et al. ISME Journal
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- (2013) Catherine Larose et al. PLoS One
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- (2012) Luiz F.W. Roesch et al. APPLIED SOIL ECOLOGY
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- (2012) Lee F. Stanish et al. ENVIRONMENTAL MICROBIOLOGY
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- (2012) Yuki Chan et al. ENVIRONMENTAL MICROBIOLOGY
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- (2012) C.W. Chong et al. GEODERMA
- A metagenomic assessment of winter and summer bacterioplankton from Antarctica Peninsula coastal surface waters
- (2012) Joseph J Grzymski et al. ISME Journal
- Bacterial diversity in ornithogenic soils compared to mineral soils on King George Island, Antarctica
- (2012) Ok-Sun Kim et al. JOURNAL OF MICROBIOLOGY
- Global biogeography of SAR11 marine bacteria
- (2012) Mark V Brown et al. Molecular Systems Biology
- Pole-to-pole biogeography of surface and deep marine bacterial communities
- (2012) J.-F. Ghiglione et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom
- (2012) H. Teeling et al. SCIENCE
- Rapid microbial response to the presence of an ancient relic in the Antarctic Dry Valleys
- (2012) Grace Tiao et al. Nature Communications
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- (2012) David A. Pearce et al. Frontiers in Microbiology
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- (2011) Thibault Varin et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Microbial diversity of active layer and permafrost in an acidic wetland from the Canadian High Arctic
- (2011) Roland C. Wilhelm et al. CANADIAN JOURNAL OF MICROBIOLOGY
- Pronounced summer to winter differences and higher wintertime richness in coastal Antarctic marine bacterioplankton
- (2011) J. F. Ghiglione et al. ENVIRONMENTAL MICROBIOLOGY
- When a habitat freezes solid: microorganisms over-winter within the ice column of a coastal Antarctic lake
- (2011) Christine M. Foreman et al. FEMS MICROBIOLOGY ECOLOGY
- The impact of different soil parameters on the community structure of dominant bacteria from nine different soils located on Livingston Island, South Shetland Archipelago, Antarctica
- (2011) Lars Ganzert et al. FEMS MICROBIOLOGY ECOLOGY
- Differential photoinhibition of bacterial and archaeal ammonia oxidation
- (2011) Stephanie N. Merbt et al. FEMS MICROBIOLOGY LETTERS
- Shifts in soil microorganisms in response to warming are consistent across a range of Antarctic environments
- (2011) Etienne Yergeau et al. ISME Journal
- The Inter-Valley Soil Comparative Survey: the ecology of Dry Valley edaphic microbial communities
- (2011) Charles K Lee et al. ISME Journal
- Microbial community structure of Arctic multiyear sea ice and surface seawater by 454 sequencing of the 16S RNA gene
- (2011) Jeff S Bowman et al. ISME Journal
- Hypolithic microbial communities of quartz rocks from Miers Valley, McMurdo Dry Valleys, Antarctica
- (2011) Nuraan Khan et al. POLAR BIOLOGY
- Potential for Chemolithoautotrophy Among Ubiquitous Bacteria Lineages in the Dark Ocean
- (2011) B. K. Swan et al. SCIENCE
- High archaeal diversity in Antarctic circumpolar deep waters
- (2011) Laura Alonso-Sáez et al. Environmental Microbiology Reports
- Ancient origins determine global biogeography of hot and cold desert cyanobacteria
- (2011) Justin Bahl et al. Nature Communications
- Bacterial diversity in rhizosphere soil from Antarctic vascular plants of Admiralty Bay, maritime Antarctica
- (2010) Lia C R S Teixeira et al. ISME Journal
- On the rocks: the microbiology of Antarctic Dry Valley soils
- (2010) S. Craig Cary et al. NATURE REVIEWS MICROBIOLOGY
- The limnology and biology of the Dufek Massif, Transantarctic Mountains 82° South
- (2010) Dominic A. Hodgson et al. Polar Science
- Bacterial diversity associated with ornithogenic soil of the Ross Sea region, AntarcticaThis article is one of a selection of papers in the Special Issue on Polar and Alpine Microbiology.
- (2009) J. Aislabie et al. CANADIAN JOURNAL OF MICROBIOLOGY
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- (2009) Donna L. Sutherland POLAR BIOLOGY
- Highly specialized microbial diversity in hyper-arid polar desert
- (2009) S. B. Pointing et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Winter-to-summer changes in the composition and single-cell activity of near-surface Arctic prokaryotes
- (2008) Laura Alonso-Sáez et al. ENVIRONMENTAL MICROBIOLOGY
- The phylogeography of Adelie penguin faecal flora
- (2008) Jonathan C. Banks et al. ENVIRONMENTAL MICROBIOLOGY
- Sources of edaphic cyanobacterial diversity in the Dry Valleys of Eastern Antarctica
- (2008) Susanna A Wood et al. ISME Journal
- High diversity of cultivable heterotrophic bacteria in association with cyanobacterial water blooms
- (2008) Katri A Berg et al. ISME Journal
- Genome analysis of the proteorhodopsin-containing marine bacterium Polaribacter sp. MED152 (Flavobacteria)
- (2008) J. M. Gonzalez et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Extracellular hydrolytic enzyme screening of culturable heterotrophic bacteria from deep-sea sediments of the Southern Okinawa Trough
- (2008) Hongyue Dang et al. WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY
- Antarctic soils and soil formation in a changing environment: A review
- (2007) F.C. Ugolini et al. GEODERMA
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