Molecular Evolution of Far-Red Light-Acclimated Photosystem II

Structural insights into a dimeric Psb27-photosystem II complex from a cyanobacterium Thermosynechococcus vulcanus

(2021) Guoqiang Huang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Long‐term adaptation of Arabidopsis thaliana to Far‐red light

(2021) Chen Hu et al.   PLANT CELL AND ENVIRONMENT

Expasy, the Swiss Bioinformatics Resource Portal, as designed by its users

(2021) Séverine Duvaud et al.   NUCLEIC ACIDS RESEARCH

Time-resolved comparative molecular evolution of oxygenic photosynthesis

(2021) Thomas Oliver et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

High-resolution model of Arabidopsis Photosystem II reveals the structural consequences of digitonin-extraction

(2021) André T. Graça et al.   Scientific Reports

Cryo-EM structure of monomeric photosystem II at 2.78 Å resolution reveals factors important for the formation of dimer

(2021) Huaxin Yu et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Complete Genome Sequencing of a Novel Gloeobacter Species from a Waterfall Cave in Mexico

(2021) Jimmy H Saw et al.   Genome Biology and Evolution

Structure of a monomeric photosystem II core complex from a cyanobacterium acclimated to far-red light reveals the functions of chlorophylls d and f

(2021) Christopher J. Gisriel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Structure of a photosystem I-ferredoxin complex from a marine cyanobacterium provides insights into far-red light photoacclimation

(2021) Christopher J. Gisriel et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

High-resolution cryo-electron microscopy structure of photosystem II from the mesophilic cyanobacterium, Synechocystis sp. PCC 6803

(2021) Christopher J. Gisriel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

(2020) Bui Quang Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Substantial near-infrared radiation-driven photosynthesis of chlorophyll f-containing cyanobacteria in a natural habitat

(2020) Michael Kühl et al.   eLife

The structure of Photosystem I acclimated to far-red light illuminates an ecologically important acclimation process in photosynthesis

(2020) Christopher Gisriel et al.   Science Advances

Global distribution of a chlorophyll f cyanobacterial marker

(2020) Laura A. Antonaru et al.   ISME Journal

Biosynthesis of the modified tetrapyrroles—the pigments of life

(2020) Donald A. Bryant et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Characterization of cyanobacterial allophycocyanins absorbing far-red light

(2020) Nathan Soulier et al.   PHOTOSYNTHESIS RESEARCH

The diversity and distribution of D1 proteins in cyanobacteria

(2020) Kevin J. Sheridan et al.   PHOTOSYNTHESIS RESEARCH

Opportunities and challenges for assigning cofactors in cryo-EM density maps of chlorophyll-containing proteins

(2020) Christopher J. Gisriel et al.   Communications Biology

Characterization of chlorophyll f synthase heterologously produced in Synechococcus sp. PCC 7002

(2019) Gaozhong Shen et al.   PHOTOSYNTHESIS RESEARCH

Far-red light acclimation in diverse oxygenic photosynthetic organisms

(2019) Benjamin M. Wolf et al.   PHOTOSYNTHESIS RESEARCH

Extensive remodeling of the photosynthetic apparatus alters energy transfer among photosynthetic complexes when cyanobacteria acclimate to far-red light

(2019) Ming-Yang Ho et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Tuning antenna function through hydrogen bonds to chlorophyll a

(2019) Manuel J. Llansola-Portoles et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Life in the dark: far‐red absorbing cyanobacteria extend photic zones deep into terrestrial caves

(2019) Lars Behrendt et al.   ENVIRONMENTAL MICROBIOLOGY

Far-red light allophycocyanin subunits play a role in chlorophyll d accumulation in far-red light

(2019) Donald A. Bryant et al.   PHOTOSYNTHESIS RESEARCH

Far-red light photoadaptations in aquatic cyanobacteria

(2018) Svetlana Averina et al.   HYDROBIOLOGIA

Photochemistry beyond the red limit in chlorophyll f–containing photosystems

(2018) Dennis J. Nürnberg et al.   SCIENCE

Early Archean origin of Photosystem II

(2018) Tanai Cardona et al.   Geobiology

A niche for cyanobacteria producing chlorophyll f within a microbial mat

(2017) Satoshi Ohkubo et al.   ISME Journal

UFBoot2: Improving the Ultrafast Bootstrap Approximation

(2017) Diep Thi Hoang et al.   MOLECULAR BIOLOGY AND EVOLUTION

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

Far-red light photoacclimation (FaRLiP) in Synechococcus sp. PCC 7335. II.Characterization of phycobiliproteins produced during acclimation to far-red light

(2016) Ming-Yang Ho et al.   PHOTOSYNTHESIS RESEARCH

Light-dependent chlorophyll f synthase is a highly divergent paralog of PsbA of photosystem II

(2016) M.-Y. Ho et al.   SCIENCE

Interaction of the PsbH subunit with a chlorophyll bound to histidine 114 of CP47 is responsible for the red 77K fluorescence of Photosystem II

(2015) Sandrine E. D'Haene et al.   BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS

Adaptive and acclimative responses of cyanobacteria to far-red light

(2015) Fei Gan et al.   ENVIRONMENTAL MICROBIOLOGY

Chlorophyll f-driven photosynthesis in a cavernous cyanobacterium

(2015) Lars Behrendt et al.   ISME Journal

Origin and Evolution of Water Oxidation before the Last Common Ancestor of the Cyanobacteria

(2015) Tanai Cardona et al.   MOLECULAR BIOLOGY AND EVOLUTION

Chlorophyll Modifications and Their Spectral Extension in Oxygenic Photosynthesis

(2014) Min Chen   Annual Review of Biochemistry

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Extensive remodeling of a cyanobacterial photosynthetic apparatus in far-red light

(2014) F. Gan et al.   SCIENCE

Ultrafast Approximation for Phylogenetic Bootstrap

(2013) B. Q. Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Improving the coverage of the cyanobacterial phylum using diversity-driven genome sequencing

(2013) P. M. Shih et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dendroscope 3: An Interactive Tool for Rooted Phylogenetic Trees and Networks

(2012) Daniel H. Huson et al.   SYSTEMATIC BIOLOGY

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Crystal structure of oxygen-evolving photosystem II at a resolution of 1.9 Å

(2011) Yasufumi Umena et al.   NATURE

Expanding the solar spectrum used by photosynthesis

(2011) Min Chen et al.   TRENDS IN PLANT SCIENCE

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Automated comparative protein structure modeling with SWISS-MODEL and Swiss-PdbViewer: A historical perspective

(2010) Nicolas Guex et al.   ELECTROPHORESIS

A viewpoint: Why chlorophyll a?

(2009) Lars Olof Björn et al.   PHOTOSYNTHESIS RESEARCH