Automated comparative protein structure modeling with SWISS-MODEL and Swiss-PdbViewer: A historical perspective

Protein structure homology modeling using SWISS-MODEL workspace

(2009) Lorenza Bordoli et al.   Nature Protocols

PIGS: automatic prediction of antibody structures

(2008) P. Marcatili et al.   BIOINFORMATICS

Integrating biological data – the Distributed Annotation System

(2008) Andrew M Jenkinson et al.   BMC BIOINFORMATICS

Exploring the structure and function paradigm

(2008) Oliver C. Redfern et al.   CURRENT OPINION IN STRUCTURAL BIOLOGY

A Geographic Variant of theStaphylococcus aureusPanton‐Valentine Leukocidin Toxin and the Origin of Community‐Associated Methicillin‐ResistantS. aureusUSA300

(2008) F. Patrick O’Hara et al.   JOURNAL OF INFECTIOUS DISEASES

Evolution Rescues Folding of Human Immunodeficiency Virus-1 Envelope Glycoprotein GP120 Lacking a Conserved Disulfide Bond

(2008) Rogier W. Sanders et al.   MOLECULAR BIOLOGY OF THE CELL

Accurate prediction of protein–protein interactions from sequence alignments using a Bayesian method

(2008) Lukas Burger et al.   Molecular Systems Biology

Database resources of the National Center for Biotechnology Information

(2008) E. W. Sayers et al.   NUCLEIC ACIDS RESEARCH

The Universal Protein Resource (UniProt) 2009

(2008)   NUCLEIC ACIDS RESEARCH

The protein structure initiative structural genomics knowledgebase

(2008) H. M. Berman et al.   NUCLEIC ACIDS RESEARCH

MODBASE, a database of annotated comparative protein structure models and associated resources

(2008) U. Pieper et al.   NUCLEIC ACIDS RESEARCH

The SWISS-MODEL Repository and associated resources

(2008) F. Kiefer et al.   NUCLEIC ACIDS RESEARCH

Natural variation of potato allene oxide synthase 2 causes differential levels of jasmonates and pathogen resistance in Arabidopsis

(2008) Karolina M. Pajerowska-Mukhtar et al.   PLANTA

Biological Function and Molecular Mapping of M Antigen in Yeast Phase of Histoplasma capsulatum

(2008) Allan Jefferson Guimarães et al.   PLoS One

Identification of direct residue contacts in protein-protein interaction by message passing

(2008) M. Weigt et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

How well can the accuracy of comparative protein structure models be predicted?

(2008) David Eramian et al.   PROTEIN SCIENCE

Model quality assessment using distance constraints from alignments

(2008) Martin Paluszewski et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Toward high-resolution homology modeling of antibody Fvregions and application to antibody-antigen docking

(2008) Arvind Sivasubramanian et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

QMEAN: A comprehensive scoring function for model quality assessment

(2007) Pascal Benkert et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

LiveBench-8: The large-scale, continuous assessment of automated protein structure prediction

(2004) Leszek Rychlewski et al.   PROTEIN SCIENCE