A Comparative Genomic and Safety Assessment of Six Lactiplantibacillus plantarum subsp. argentoratensis Strains Isolated from Spontaneously Fermented Greek Wheat Sourdoughs for Potential Biotechnological Application
Published 2022 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
A Comparative Genomic and Safety Assessment of Six Lactiplantibacillus plantarum subsp. argentoratensis Strains Isolated from Spontaneously Fermented Greek Wheat Sourdoughs for Potential Biotechnological Application
Authors
Keywords
-
Journal
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Volume 23, Issue 5, Pages 2487
Publisher
MDPI AG
Online
2022-02-24
DOI
10.3390/ijms23052487
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Comprehensive pan‐genome analysis of Lactiplantibacillus plantarum complete genomes
- (2021) Francesco M. Carpi et al. JOURNAL OF APPLIED MICROBIOLOGY
- High-quality draft genome sequence data of six Lactiplantibacillus plantarum subsp. argentoratensis strains isolated from various Greek wheat sourdoughs
- (2021) Maria K. Syrokou et al. Data in Brief
- Genome Analysis of Lactobacillus plantarum Isolated From Some Indian Fermented Foods for Bacteriocin Production and Probiotic Marker Genes
- (2020) Aditi Goel et al. Frontiers in Microbiology
- ResFinder 4.0 for predictions of phenotypes from genotypes
- (2020) Valeria Bortolaia et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Safety Assessment of a Nham Starter Culture Lactobacillus plantarum BCC9546 via Whole-genome Analysis
- (2020) Nipa Chokesajjawatee et al. Scientific Reports
- Detection of mobile genetic elements associated with antibiotic resistance in Salmonella enterica using a newly developed web tool: MobileElementFinder
- (2020) Markus H K Johansson et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- β-Galactosidase from Lactobacillus helveticus DSM 20075: Biochemical Characterization and Recombinant Expression for Applications in Dairy Industry
- (2019) Suwapat Kittibunchakul et al. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
- TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
- (2019) Jan P. Meier-Kolthoff et al. Nature Communications
- Genomic Insights Into Five Strains of Lactobacillus plantarum With Biotechnological Potential Isolated From chicha, a Traditional Maize-Based Fermented Beverage From Northwestern Argentina
- (2019) Lidia Rodrigo-Torres et al. Frontiers in Microbiology
- KofamKOALA: KEGG ortholog assignment based on profile HMM and adaptive score threshold
- (2019) Takuya Aramaki et al. BIOINFORMATICS
- The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities
- (2019) James J Davis et al. NUCLEIC ACIDS RESEARCH
- Investigation of genomic characteristics and carbohydrates’ metabolic activity of Lactococcus lactis subsp. lactis during ripening of a Swiss-type cheese
- (2019) Marios Mataragas FOOD MICROBIOLOGY
- Clustering of Pan- and Core-genome of Lactobacillus provides Novel Evolutionary Insights for Differentiation
- (2018) Raffael C. Inglin et al. BMC GENOMICS
- Proposed minimal standards for the use of genome data for the taxonomy of prokaryotes
- (2018) Jongsik Chun et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- CRISPRCasFinder, an update of CRISRFinder, includes a portable version, enhanced performance and integrates search for Cas proteins
- (2018) David Couvin et al. NUCLEIC ACIDS RESEARCH
- Pushing the limits of de novo genome assembly for complex prokaryotic genomes harboring very long, near identical repeats
- (2018) Michael Schmid et al. NUCLEIC ACIDS RESEARCH
- Overview of Sourdough Technology: from Production to Marketing
- (2017) Francieli B. Siepmann et al. Food and Bioprocess Technology
- ContEst16S: an algorithm that identifies contaminated prokaryotic genomes using 16S RNA gene sequences
- (2017) Imchang Lee et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
- (2017) INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- PointFinder: a novel web tool for WGS-based detection of antimicrobial resistance associated with chromosomal point mutations in bacterial pathogens
- (2017) Ea Zankari et al. JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY
- Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
- (2017) Jaime Huerta-Cepas et al. MOLECULAR BIOLOGY AND EVOLUTION
- Pan-genomic and transcriptomic analyses of Leuconostoc mesenteroides provide insights into its genomic and metabolic features and roles in kimchi fermentation
- (2017) Byung Hee Chun et al. Scientific Reports
- Biogenic Amines in Dairy Products: Origin, Incidence, and Control Means
- (2016) Noreddine Benkerroum COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY
- Ancestral Andean grain quinoa as source of lactic acid bacteria capable to degrade phytate and produce B-group vitamins
- (2016) Silvana L. Carrizo et al. FOOD RESEARCH INTERNATIONAL
- OrthoANI: An improved algorithm and software for calculating average nucleotide identity
- (2016) Imchang Lee et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Comparative genomic analysis of Lactobacillus plantarum ZJ316 reveals its genetic adaptation and potential probiotic profiles
- (2016) Ping Li et al. Journal of Zhejiang University-SCIENCE B
- PHASTER: a better, faster version of the PHAST phage search tool
- (2016) David Arndt et al. NUCLEIC ACIDS RESEARCH
- CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
- (2016) Baofeng Jia et al. NUCLEIC ACIDS RESEARCH
- From Genomes to Phenotypes: Traitar, the Microbial Trait Analyzer
- (2016) Aaron Weimann et al. mSystems
- BPGA- an ultra-fast pan-genome analysis pipeline
- (2016) Narendrakumar M. Chaudhari et al. Scientific Reports
- Complete genome sequences and comparative genome analysis of Lactobacillus plantarum strain 5-2 isolated from fermented soybean
- (2015) Chen-Jian Liu et al. GENOMICS
- Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera
- (2015) Zhihong Sun et al. Nature Communications
- In SilicoDetection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing
- (2014) Alessandra Carattoli et al. ANTIMICROBIAL AGENTS AND CHEMOTHERAPY
- jvenn: an interactive Venn diagram viewer
- (2014) Philippe Bardou et al. BMC BIOINFORMATICS
- Enhanced degradation of five organophosphorus pesticides in skimmed milk by lactic acid bacteria and its potential relationship with phosphatase production
- (2014) Ying-Hua Zhang et al. FOOD CHEMISTRY
- Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea
- (2014) J. Chun et al. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
- Real-Time Whole-Genome Sequencing for Routine Typing, Surveillance, and Outbreak Detection of Verotoxigenic Escherichia coli
- (2014) K. G. Joensen et al. JOURNAL OF CLINICAL MICROBIOLOGY
- Dissipation of pirimiphos-methyl during wheat fermentation byLactobacillus plantarum
- (2013) T.M. Đorđević et al. LETTERS IN APPLIED MICROBIOLOGY
- The carbohydrate-active enzymes database (CAZy) in 2013
- (2013) Vincent Lombard et al. NUCLEIC ACIDS RESEARCH
- BAGEL3: automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides
- (2013) Auke J. van Heel et al. NUCLEIC ACIDS RESEARCH
- Correction: PathogenFinder - Distinguishing Friend from Foe Using Bacterial Whole Genome Sequence Data
- (2013) Salvatore Cosentino et al. PLoS One
- Type I-E CRISPR-Cas Systems Discriminate Target from Non-Target DNA through Base Pairing-Independent PAM Recognition
- (2013) Edze R. Westra et al. PLoS Genetics
- Search and clustering orders of magnitude faster than BLAST
- (2010) Robert C. Edgar BIOINFORMATICS
- Prebiotic effects: metabolic and health benefits
- (2010) Marcel Roberfroid et al. BRITISH JOURNAL OF NUTRITION
- β-Galactosidase from Lactobacillus plantarum WCFS1: biochemical characterization and formation of prebiotic galacto-oligosaccharides
- (2010) Sanaullah Iqbal et al. CARBOHYDRATE RESEARCH
- Qualified presumption of safety (QPS): a generic risk assessment approach for biological agents notified to the European Food Safety Authority (EFSA)
- (2010) Renata G.K. Leuschner et al. TRENDS IN FOOD SCIENCE & TECHNOLOGY
- An overview of the mosaic bacteriocin pln loci from Lactobacillus plantarum
- (2009) Dzung B. Diep et al. PEPTIDES
- Lactobacillus plantarum AJ2 isolated from naturally fermented sausage and its effects on the technological properties of Milano-type salami
- (2008) Maristela Cortez Sawitzki et al. Food Science and Technology
- Comparative genomics: the bacterial pan-genome
- (2008) Hervé Tettelin et al. CURRENT OPINION IN MICROBIOLOGY
- CRISPR Interference Limits Horizontal Gene Transfer in Staphylococci by Targeting DNA
- (2008) Luciano A. Marraffini et al. SCIENCE
Become a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get StartedAsk a Question. Answer a Question.
Quickly pose questions to the entire community. Debate answers and get clarity on the most important issues facing researchers.
Get Started