Bacterial Response to Oxidative Stress and RNA Oxidation

Redox controls RecA protein activity via reversible oxidation of its methionine residues

(2021) Camille Henry et al.   eLife

How Microbes Defend Themselves From Incoming Hydrogen Peroxide

(2021) Ananya Sen et al.   Frontiers in Immunology

Oxidative Modifications of RNA and Its Potential Roles in Biosystem

(2021) Mikiei Tanaka et al.   Frontiers in Molecular Biosciences

Oxidative Stress in Bacteria and the Central Dogma of Molecular Biology

(2021) Michel Fasnacht et al.   Frontiers in Molecular Biosciences

Oxidative Damage to RNA is Altered by the Presence of Interacting Proteins or Modified Nucleosides

(2021) Mariana Estevez et al.   Frontiers in Molecular Biosciences

The Novel ncRNA OsiR Positively Regulates Expression of katE2 and is Required for Oxidative Stress Tolerance in Deinococcus radiodurans

(2020) Lihua Gao et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Position-specific oxidation of miR-1 encodes cardiac hypertrophy

(2020) Heeyoung Seok et al.   NATURE

Recent Advances: Molecular Mechanism of RNA Oxidation and Its Role in Various Diseases

(2020) Zhe Li et al.   Frontiers in Molecular Biosciences

RNA-Binding Proteins Driving the Regulatory Activity of Small Non-coding RNAs in Bacteria

(2020) Ana P. Quendera et al.   Frontiers in Molecular Biosciences

Hfq and RNase R Mediate rRNA Processing and Degradation in a Novel RNA Quality Control Process

(2020) Ricardo F. dos Santos et al.   mBio

Modulation of Escherichia coli Translation by the Specific Inactivation of tRNAGly Under Oxidative Stress

(2020) Lorenzo Eugenio Leiva et al.   Frontiers in Genetics

Maintenance of translational elongation rate underlies the survival of Escherichia coli during oxidative stress

(2019) Manlu Zhu et al.   NUCLEIC ACIDS RESEARCH

Two ways of escaping from oxidative RNA damage: Selective degradation and cell death

(2019) Takashi Ishii et al.   DNA REPAIR

The Pseudomonas stutzeri-specific regulatory ncRNA, NfiS, targets the katB mRNA encoding a catalase essential for optimal oxidative resistance and nitrogenase activity

(2019) Hongyang Zhang et al.   JOURNAL OF BACTERIOLOGY

Insights into the base-pairing preferences of 8-oxoguanosine on the ribosome

(2019) Erica N Thomas et al.   NUCLEIC ACIDS RESEARCH

RsaC sRNA modulates the oxidative stress response of Staphylococcus aureus during manganese starvation

(2019) David Lalaouna et al.   NUCLEIC ACIDS RESEARCH

How do cells cope with RNA damage and its consequences?

(2019) Liewei L. Yan et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Reactive Oxygen Species-Induced Lipid Peroxidation in Apoptosis, Autophagy, and Ferroptosis

(2019) Lian-Jiu Su et al.   Oxidative Medicine and Cellular Longevity

The Impact of Oxidative Stress on Ribosomes: From Injury to Regulation

(2019) Natalia Shcherbik et al.   Cells

sRNA OsiA Stabilizes Catalase mRNA during Oxidative Stress Response of Deincoccus radiodurans R1

(2019) Yun Chen et al.   Microorganisms

DNA Oxidation and Excision Repair Pathways

(2019) Tae-Hee Lee et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

8-Hydroxyguanosine as a possible RNA oxidative modification marker in urine from colorectal cancer patients: Evaluation by ultra performance liquid chromatography-tandem mass spectrometry

(2019) Cheng Guo et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

The Effects of Ultraviolet Radiation on Nucleoside Modifications in RNA

(2018) Congliang Sun et al.   ACS Chemical Biology

New aspects of RNA-based regulation by Hfq and its partner sRNAs

(2018) Kumari Kavita et al.   CURRENT OPINION IN MICROBIOLOGY

The RNA‐binding protein Hfq is important for ribosome biogenesis and affects translation fidelity

(2018) José M Andrade et al.   EMBO JOURNAL

Oxidative stress damages rRNA inside the ribosome and differentially affects the catalytic center

(2018) Jessica Willi et al.   NUCLEIC ACIDS RESEARCH

Highly sensitive avoidance plays a key role in sensory adaptation to deep-sea hydrothermal vent environments

(2018) Tetsuya Ogino et al.   PLoS One

13 reasons why the brain is susceptible to oxidative stress

(2018) James Nathan Cobley et al.   Redox Biology

RNA oxidation and iron levels in patients with diabetes

(2018) Vanja Cejvanovic et al.   FREE RADICAL BIOLOGY AND MEDICINE

Escherichia colicytochromecperoxidase is a respiratory oxidase that enables the use of hydrogen peroxide as a terminal electron acceptor

(2017) Maryam Khademian et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Reactive oxygen: A novel antimicrobial mechanism for targeting biofilm-associated infection

(2017) Matthew S. Dryden et al.   Journal of Global Antimicrobial Resistance

Quality control of chemically damaged RNA

(2016) Carrie L. Simms et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Pathways controlling dNTP pools to maintain genome stability

(2016) Sean G. Rudd et al.   DNA REPAIR

Transcription Factors That Defend Bacteria Against Reactive Oxygen Species

(2015) James A. Imlay   Annual Review of Microbiology

Fe–S proteins that regulate gene expression

(2015) Erin L. Mettert et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Oxidative Modification of miR-184 Enables It to Target Bcl-xL and Bcl-w

(2015) Jian-Xun Wang et al.   MOLECULAR CELL

Role of Oxidative RNA Damage in Chronic-Degenerative Diseases

(2015) Carmela Fimognari   Oxidative Medicine and Cellular Longevity

Transfer RNAs Mediate the Rapid Adaptation of Escherichia coli to Oxidative Stress

(2015) Jiayong Zhong et al.   PLoS Genetics

Reactive oxygen species and the bacterial response to lethal stress

(2014) Xilin Zhao et al.   CURRENT OPINION IN MICROBIOLOGY

An Active Role for the Ribosome in Determining the Fate of Oxidized mRNA

(2014) Carrie L. Simms et al.   Cell Reports

Protein Oxidation: Basic Principles and Implications for Meat Quality

(2013) Wangang Zhang et al.   CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION

Mycobacterium tuberculosisMutT1 (Rv2985) and ADPRase (Rv1700) Proteins Constitute a Two-stage Mechanism of 8-Oxo-dGTP and 8-Oxo-GTP Detoxification and Adenosine to Cytidine Mutation Avoidance

(2013) Aravind Goud G. Patil et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Oxidative stress sensing by the iron–sulfur cluster in the transcription factor, SoxR

(2013) Kazuo Kobayashi et al.   JOURNAL OF INORGANIC BIOCHEMISTRY

The molecular mechanisms and physiological consequences of oxidative stress: lessons from a model bacterium

(2013) James A. Imlay   NATURE REVIEWS MICROBIOLOGY

Small RNA Modules Confer Different Stabilities and Interact Differently with Multiple Targets

(2013) José Marques Andrade et al.   PLoS One

Pervasive Transcription of the Human Genome Produces Thousands of Previously Unidentified Long Intergenic Noncoding RNAs

(2013) Matthew J. Hangauer et al.   PLoS Genetics

Battle against RNA oxidation: molecular mechanisms for reducing oxidized RNA to protect cells

(2013) Zhongwei Li et al.   Wiley Interdisciplinary Reviews-RNA

Why do bacteria use so many enzymes to scavenge hydrogen peroxide?

(2012) Surabhi Mishra et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Regulators of oxidative stress response genes in Escherichia coli and their functional conservation in bacteria

(2012) Sarah M. Chiang et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Characterization of RNA damage under oxidative stress in Escherichia coli

(2012) Min Liu et al.   BIOLOGICAL CHEMISTRY

TheYersinia pseudotuberculosisdegradosome is required for oxidative stress, while its PNPase subunit plays a degradosome-independent role in cold growth

(2012) Amanda Henry et al.   FEMS MICROBIOLOGY LETTERS

Role of oxygen gradients in shaping redox relationships between the human intestine and its microbiota

(2012) Michael Graham Espey   FREE RADICAL BIOLOGY AND MEDICINE

Peroxide-Sensing Transcriptional Regulators in Bacteria

(2012) J. M. Dubbs et al.   JOURNAL OF BACTERIOLOGY

Free Radical Lipid Peroxidation: Mechanisms and Analysis

(2011) Huiyong Yin et al.   CHEMICAL REVIEWS

The SoxRS response of Escherichia coli is directly activated by redox-cycling drugs rather than by superoxide

(2011) Mianzhi Gu et al.   MOLECULAR MICROBIOLOGY

Oxidative damage to RNA: mechanisms, consequences, and diseases

(2010) Qiongman Kong et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

8-Oxo-7,8-dihydroguanine: Links to gene expression, aging, and defense against oxidative stress

(2010) Zsolt Radak et al.   FREE RADICAL BIOLOGY AND MEDICINE

Polynucleotide Phosphorylase ProtectsEscherichia coliagainst Oxidative Stress†

(2009) Jinhua Wu et al.   BIOCHEMISTRY

Lipid peroxidation: Physiological levels and dual biological effects

(2009) Etsuo Niki   FREE RADICAL BIOLOGY AND MEDICINE

The Major Catalase Gene (katA) of Pseudomonas aeruginosa PA14 Is under both Positive and Negative Control of the Global Transactivator OxyR in Response to Hydrogen Peroxide

(2009) Y.-J. Heo et al.   JOURNAL OF BACTERIOLOGY

Structural characterization of the active form of PerR: insights into the metal-induced activation of PerR and Fur proteins for DNA binding

(2009) L. Jacquamet et al.   MOLECULAR MICROBIOLOGY

Human polynucleotide phosphorylase reduces oxidative RNA damage and protects HeLa cell against oxidative stress

(2008) Jinhua Wu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

DNA Adducts with Lipid Peroxidation Products

(2008) Ian A. Blair   JOURNAL OF BIOLOGICAL CHEMISTRY

tRNA cleavage is a conserved response to oxidative stress in eukaryotes

(2008) D. M. Thompson et al.   RNA