Small RNA Modules Confer Different Stabilities and Interact Differently with Multiple Targets

Multiple activities of RNA-binding proteins S1 and Hfq

(2012) Eliane Hajnsdorf et al.   BIOCHIMIE

Multiple factors dictate target selection by Hfq-binding small RNAs

(2012) Chase L Beisel et al.   EMBO JOURNAL

Comparative Profiling of Pseudomonas aeruginosa Strains Reveals Differential Expression of Novel Unique and Conserved Small RNAs

(2012) Silvia Ferrara et al.   PLoS One

Small RNA binding to the lateral surface of Hfq hexamers and structural rearrangements upon mRNA target recognition

(2012) E. Sauer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The crucial role of PNPase in the degradation of small RNAs that are not associated with Hfq

(2012) J. M. Andrade et al.   RNA

Despite Similar Binding to the Hfq Protein Regulatory RNAs Widely Differ in Their Competition Performance

(2011) Mikołaj Olejniczak   BIOCHEMISTRY

Deep sequencing reveals as-yet-undiscovered small RNAs in Escherichia coli

(2011) Atsuko Shinhara et al.   BMC GENOMICS

Small RNA-induced mRNA degradation achieved through both translation block and activated cleavage

(2011) K. Prevost et al.   GENES & DEVELOPMENT

Accessibility and Evolutionary Conservation Mark Bacterial Small-RNA Target-Binding Regions

(2011) A. Peer et al.   JOURNAL OF BACTERIOLOGY

Engineering Biological Systems with Synthetic RNA Molecules

(2011) Joe C. Liang et al.   MOLECULAR CELL

Hfq and its constellation of RNA

(2011) Jörg Vogel et al.   NATURE REVIEWS MICROBIOLOGY

The small RNA SgrS controls sugar–phosphate accumulation by regulating multiple PTS genes

(2011) Jennifer B. Rice et al.   NUCLEIC ACIDS RESEARCH

PolyU tail of rho-independent terminator of bacterial small RNAs is essential for Hfq action

(2011) Hironori Otaka et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Small RNAs endow a transcriptional activator with essential repressor functions for single-tier control of a global stress regulon

(2011) E. B. Gogol et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hfq affects mRNA levels independently of degradation

(2010) Jacques Le Derout et al.   BMC MOLECULAR BIOLOGY

Reprogramming of anaerobic metabolism by the FnrS small RNA

(2010) Sylvain Durand et al.   MOLECULAR MICROBIOLOGY

Recognition of heptameric seed sequence underlies multi-target regulation by RybB small RNA in Salmonella enterica

(2010) Roberto Balbontín et al.   MOLECULAR MICROBIOLOGY

MicA sRNA links the PhoP regulon to cell envelope stress

(2010) Audrey Coornaert et al.   MOLECULAR MICROBIOLOGY

RNA-mediated regulation in bacteria: from natural to artificial systems

(2010) Efthimia Lioliou et al.   New Biotechnology

Regulation of the small regulatory RNA MicA by ribonuclease III: a target-dependent pathway

(2010) Sandra C. Viegas et al.   NUCLEIC ACIDS RESEARCH

Evidence for an autonomous 5' target recognition domain in an Hfq-associated small RNA

(2010) K. Papenfort et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A small RNA promotes siderophore production through transcriptional and metabolic remodeling

(2010) H. Salvail et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Experimental approaches for the discovery and characterization of regulatory small RNA

(2009) Cynthia Mira Sharma et al.   CURRENT OPINION IN MICROBIOLOGY

A broadening world of bacterial small RNAs

(2009) Jane M Liu et al.   CURRENT OPINION IN MICROBIOLOGY

Small RNA-induced differential degradation of the polycistronic mRNA iscRSUA

(2009) Guillaume Desnoyers et al.   EMBO JOURNAL

Structure of Escherichia coli Hfq bound to polyriboadenylate RNA

(2009) T. M. Link et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Multiple target regulation by small noncoding RNAs rewires gene expression at the post-transcriptional level

(2009) Kai Papenfort et al.   RESEARCH IN MICROBIOLOGY

RNAalifold: improved consensus structure prediction for RNA alignments

(2008) Stephan H Bernhart et al.   BMC BIOINFORMATICS

Small RNA Binding to 5′ mRNA Coding Region Inhibits Translational Initiation

(2008) Marie Bouvier et al.   MOLECULAR CELL

The 5′ end of two redundant sRNAs is involved in the regulation of multiple targets, including their own regulator

(2008) Maude Guillier et al.   NUCLEIC ACIDS RESEARCH

PNPase is a key player in the regulation of small RNAs that control the expression of outer membrane proteins

(2008) J. M. Andrade et al.   RNA