Transfer RNAs Mediate the Rapid Adaptation of Escherichia coli to Oxidative Stress

Neuronal cells but not muscle cells are resistant to oxidative stress mediated protein misfolding and cell death: Role of molecular chaperones

(2014) Arunabh Bhattacharya et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

The molecular mechanisms and physiological consequences of oxidative stress: lessons from a model bacterium

(2013) James A. Imlay   NATURE REVIEWS MICROBIOLOGY

Reversible and Rapid Transfer-RNA Deactivation as a Mechanism of Translational Repression in Stress

(2013) Andreas Czech et al.   PLoS Genetics

Redox regulation of protein misfolding, mitochondrial dysfunction, synaptic damage, and cell death in neurodegenerative diseases

(2012) Tomohiro Nakamura et al.   EXPERIMENTAL NEUROLOGY

tRNA concentration fine tunes protein solubility

(2012) Ivan Fedyunin et al.   FEBS LETTERS

Genome-wide Identification and Quantitative Analysis of Cleaved tRNA Fragments Induced by Cellular Stress

(2012) Mridusmita Saikia et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Binomial Probability Distribution Model-Based Protein Identification Algorithm for Tandem Mass Spectrometry Utilizing Peak Intensity Information

(2012) Chuan-Le Xiao et al.   JOURNAL OF PROTEOME RESEARCH

MODOMICS: a database of RNA modification pathways—2013 update

(2012) Magdalena A. Machnicka et al.   NUCLEIC ACIDS RESEARCH

The15N isotope effect inEscherichia coli: A neutron can make the difference

(2012) Michaela D. Filiou et al.   PROTEOMICS

Selective translation during stress in Escherichia coli

(2012) Isabella Moll et al.   TRENDS IN BIOCHEMICAL SCIENCES

Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins

(2012) Clement T.Y. Chan et al.   Nature Communications

Regulation of transcriptome, translation, and proteome in response to environmental stress in fission yeast

(2012) Daniel H Lackner et al.   GENOME BIOLOGY

Proteome Turnover in the Green Alga Ostreococcus tauri by Time Course 15N Metabolic Labeling Mass Spectrometry

(2011) Sarah F. Martin et al.   JOURNAL OF PROTEOME RESEARCH

Systems-wide Proteomic Analysis in Mammalian Cells Reveals Conserved, Functional Protein Turnover

(2011) Sidney B. Cambridge et al.   JOURNAL OF PROTEOME RESEARCH

SILAC zebrafish for quantitative analysis of protein turnover and tissue regeneration

(2011) Ann Westman-Brinkmalm et al.   Journal of Proteomics

Protein Expression Regulation under Oxidative Stress

(2011) Christine Vogel et al.   MOLECULAR & CELLULAR PROTEOMICS

Angiogenin-Induced tRNA Fragments Inhibit Translation Initiation

(2011) Pavel Ivanov et al.   MOLECULAR CELL

Quantification of mRNA and protein and integration with protein turnover in a bacterium

(2011) T. Maier et al.   Molecular Systems Biology

Role of oxidative stress and DNA damage in human carcinogenesis

(2011) Thomas B. Kryston et al.   MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS

Bacterial Proteome of Streptococcus pneumoniae Through Multidimensional Separations Coupled with LC-MS/MS

(2011) Xuesong Sun et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Determinants of the cytotoxicity of PrrC anticodon nuclease and its amelioration by tRNA repair

(2011) B. Meineke et al.   RNA

The dynamic state of protein turnover: It's about time

(2011) Izumi V. Hinkson et al.   TRENDS IN CELL BIOLOGY

Transfer RNA modifications and genes for modifying enzymes in Arabidopsis thaliana

(2010) Peng Chen et al.   BMC PLANT BIOLOGY

tRNA biology charges to the front

(2010) E. M. Phizicky et al.   GENES & DEVELOPMENT

Metabolomic and transcriptomic stress response of Escherichia coli

(2010) Szymon Jozefczuk et al.   Molecular Systems Biology

Different sequence signatures in the upstream regions of plant and animal tRNA genes shape distinct modes of regulation

(2010) Gong Zhang et al.   NUCLEIC ACIDS RESEARCH

Global and local depletion of ternary complex limits translational elongation

(2010) Gong Zhang et al.   NUCLEIC ACIDS RESEARCH

Severe oxidative stress induces protein mistranslation through impairment of an aminoacyl-tRNA synthetase editing site

(2010) J. Ling et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Polynucleotide Phosphorylase ProtectsEscherichia coliagainst Oxidative Stress†

(2009) Jinhua Wu et al.   BIOCHEMISTRY

A novel class of small RNAs: tRNA-derived RNA fragments (tRFs)

(2009) Yong Sun Lee et al.   GENES & DEVELOPMENT

Angiogenin cleaves tRNA and promotes stress-induced translational repression

(2009) Satoshi Yamasaki et al.   JOURNAL OF CELL BIOLOGY

Transient ribosomal attenuation coordinates protein synthesis and co-translational folding

(2009) Gong Zhang et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Proteome analysis of the Escherichia coli heat shock response under steady-state conditions

(2009) Svenja Lüders et al.   Proteome Science

Stress induces tRNA cleavage by angiogenin in mammalian cells

(2008) Hanjiang Fu et al.   FEBS LETTERS

Turnover of the Human Proteome: Determination of Protein Intracellular Stability by Dynamic SILAC

(2008) Mary K. Doherty et al.   JOURNAL OF PROTEOME RESEARCH

GtRNAdb: a database of transfer RNA genes detected in genomic sequence

(2008) P. P. Chan et al.   NUCLEIC ACIDS RESEARCH

tRNA cleavage is a conserved response to oxidative stress in eukaryotes

(2008) D. M. Thompson et al.   RNA