tRNA-derived fragments from wheat are potentially involved in susceptibility to Fusarium head blight

Extensive profiling of the expressions of tRNAs and tRNA-derived fragments (tRFs) reveals the complexities of tRNA and tRF populations in plants

(2021) Xuan Ma et al.   Science China-Life Sciences

Tomato T2 ribonuclease LE is involved in the response to pathogens

(2020) Naveen Kumar Singh et al.   MOLECULAR PLANT PATHOLOGY

TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data

(2020) Chengjie Chen et al.   Molecular Plant

RIN13-mediated disease resistance depends on SNC1-EDS1/PAD4 signaling pathway in Arabidopsis

(2020) Xiaoxiao Liu et al.   JOURNAL OF EXPERIMENTAL BOTANY

Fusarium graminearum Trichothecene Mycotoxins: Biosynthesis, Regulation, and Management

(2019) Yun Chen et al.   Annual Review of Phytopathology

A deletion mutation in TaHRC confers Fhb1 resistance to Fusarium head blight in wheat

(2019) Zhenqi Su et al.   NATURE GENETICS

Mutation of a histidine-rich calcium-binding-protein gene in wheat confers resistance to Fusarium head blight

(2019) Guoqiang Li et al.   NATURE GENETICS

Rhizobial tRNA-derived small RNAs are signal molecules regulating plant nodulation

(2019) Bo Ren et al.   SCIENCE

Dysregulation of different classes of tRNA fragments in chronic lymphocytic leukemia

(2019) Dario Veneziano et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Segregation and potential functional impact of a rare stop-gain PABPC4L variant in familial atypical Parkinsonism

(2019) Muhammad Aslam et al.   Scientific Reports

Roles of tRNA-derived fragments in human cancers

(2018) Chunxiao Sun et al.   CANCER LETTERS

PtRFdb: a database for plant transfer RNA-derived fragments

(2018) Nikita Gupta et al.   Database-The Journal of Biological Databases and Curation

tRNA-Derived Small RNA: A Novel Regulatory Small Non-Coding RNA

(2018) Siqi Li et al.   Genes

The role of RNA modifications in the regulation of tRNA cleavage

(2018) Shawn M. Lyons et al.   FEBS LETTERS

Plant RNases T2, but not Dicer-like proteins, are major players of tRNA-derived fragments biogenesis

(2018) Cyrille Megel et al.   NUCLEIC ACIDS RESEARCH

Wheat Fhb1 encodes a chimeric lectin with agglutinin domains and a pore-forming toxin-like domain conferring resistance to Fusarium head blight

(2016) Nidhi Rawat et al.   NATURE GENETICS

Genome-wide identification and characterization of tRNA-derived RNA fragments in land plants

(2016) Cristiane S. Alves et al.   PLANT MOLECULAR BIOLOGY

Characterization of Small RNAs Derived from tRNAs, rRNAs and snoRNAs and Their Response to Heat Stress in Wheat Seedlings

(2016) Yu Wang et al.   PLoS One

Dysregulation of a family of short noncoding RNAs, tsRNAs, in human cancer

(2016) Yuri Pekarsky et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers

(2015) Shozo Honda et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Sperm tsRNAs contribute to intergenerational inheritance of an acquired metabolic disorder

(2015) Q. Chen et al.   SCIENCE

Meta-analysis of tRNA derived RNA fragments reveals that they are evolutionarily conserved and associate with AGO proteins to recognize specific RNA targets

(2014) Pankaj Kumar et al.   BMC BIOLOGY

tRNA modifications regulate translation during cellular stress

(2014) Chen Gu et al.   FEBS LETTERS

Structural basis for the inhibition of the eukaryotic ribosome

(2014) Nicolas Garreau de Loubresse et al.   NATURE

Transcriptomic characterization of two majorFusariumresistance quantitative trait loci (QTLs),Fhb1andQfhs.ifa-5A, identifies novel candidate genes

(2013) Wolfgang Schweiger et al.   MOLECULAR PLANT PATHOLOGY

tRNA-derived microRNA modulates proliferation and the DNA damage response and is down-regulated in B cell lymphoma

(2013) Roy L. Maute et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evaluation of the effects of five QTL regions on Fusarium head blight resistance and agronomic traits in spring wheat (Triticum aestivum L.)

(2012) Takako Suzuki et al.   BREEDING SCIENCE

The Top 10 fungal pathogens in molecular plant pathology

(2012) Ralph Dean et al.   MOLECULAR PLANT PATHOLOGY

Extensive terminal and asymmetric processing of small RNAs from rRNAs, snoRNAs, snRNAs, and tRNAs

(2012) Zhihua Li et al.   NUCLEIC ACIDS RESEARCH

The SET-Domain Protein SUVR5 Mediates H3K9me2 Deposition and Silencing at Stimulus Response Genes in a DNA Methylation–Independent Manner

(2012) Elena Caro et al.   PLoS Genetics

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Several RNase T2 enzymes function in induced tRNA and rRNA turnover in the ciliate Tetrahymena

(2011) Kasper L. Andersen et al.   MOLECULAR BIOLOGY OF THE CELL

Vulnerability of Polarised Intestinal Porcine Epithelial Cells to Mycotoxin Deoxynivalenol Depends on the Route of Application

(2011) Anne-Kathrin Diesing et al.   PLoS One

RNS2, a conserved member of the RNase T2 family, is necessary for ribosomal RNA decay in plants

(2011) M. S. Hillwig et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Deep-sequencing of human Argonaute-associated small RNAs provides insight into miRNA sorting and reveals Argonaute association with RNA fragments of diverse origin

(2011) Alexander Maxwell Burroughs et al.   RNA Biology

tRNA biology charges to the front

(2010) E. M. Phizicky et al.   GENES & DEVELOPMENT

A growth-essential Tetrahymena Piwi protein carries tRNA fragment cargo

(2010) M. T. Couvillion et al.   GENES & DEVELOPMENT

Megabase Level Sequencing Reveals Contrasted Organization and Evolution Patterns of the Wheat Gene and Transposable Element Spaces

(2010) Frédéric Choulet et al.   PLANT CELL

Human tRNA-derived small RNAs in the global regulation of RNA silencing

(2010) D. Haussecker et al.   RNA

Deoxynivalenol-Induced Proinflammatory Gene Expression: Mechanisms and Pathological Sequelae

(2010) James J. Pestka   Toxins

3′ processing of eukaryotic precursor tRNAs

(2010) Richard J. Maraia et al.   Wiley Interdisciplinary Reviews-RNA

Stressing Out over tRNA Cleavage

(2009) Debrah M. Thompson et al.   CELL

A novel class of small RNAs: tRNA-derived RNA fragments (tRFs)

(2009) Yong Sun Lee et al.   GENES & DEVELOPMENT

The RNase Rny1p cleaves tRNAs and promotes cell death during oxidative stress inSaccharomyces cerevisiae

(2009) Debrah M. Thompson et al.   JOURNAL OF CELL BIOLOGY

Angiogenin cleaves tRNA and promotes stress-induced translational repression

(2009) Satoshi Yamasaki et al.   JOURNAL OF CELL BIOLOGY

Filtering of deep sequencing data reveals the existence of abundant Dicer-dependent small RNAs derived from tRNAs

(2009) C. Cole et al.   RNA

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

SOAP: short oligonucleotide alignment program

(2008) R. Li et al.   BIOINFORMATICS

Drosophila endogenous small RNAs bind to Argonaute 2 in somatic cells

(2008) Yoshinori Kawamura et al.   NATURE

Human adenylate kinase 2 deficiency causes a profound hematopoietic defect associated with sensorineural deafness

(2008) Chantal Lagresle-Peyrou et al.   NATURE GENETICS