Multiple Lines of Evidence from Mitochondrial Genomes Resolve Phylogenetic Relationships of Parasitic Wasps in Braconidae

AliGROOVE – visualization of heterogeneous sequence divergence within multiple sequence alignments and detection of inflated branch support

(2014) Patrick Kück et al.   BMC BIOINFORMATICS

MLGO: phylogeny reconstruction and ancestral inference from gene-order data

(2014) Fei Hu et al.   BMC BIOINFORMATICS

FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies

(2014) Patrick Kück et al.   Frontiers in Zoology

Two mitochondrial genomes from the families Bethylidae and Mutillidae: Independent rearrangement of protein-coding genes and higher-level phylogeny of the Hymenoptera

(2014) Shu-Jun Wei et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Multiplex sequencing of pooled mitochondrial genomes—a crucial step toward biodiversity analysis using mito-metagenomics

(2014) Min Tang et al.   NUCLEIC ACIDS RESEARCH

Mitochondrial Phylogenomics of Early Land Plants: Mitigating the Effects of Saturation, Compositional Heterogeneity, and Codon-Usage Bias

(2014) Yang Liu et al.   SYSTEMATIC BIOLOGY

Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny

(2013) Stephen L. Cameron   Annual Review of Entomology

Performance of Microplitis tuberculifer (Hymenoptera: Braconidae) parasitizing Mythimna separata (Lepidoptera: Noctuidae) in different larval instars

(2013) Yanna Chu et al.   BIOLOGICAL CONTROL

Trichospilus diatraeae(Hymenoptera: Eulophidae): A Potential Biological Control Agent of Lepidopteran Pests of Oil Palm in the Brazilian Amazon

(2013) Rafael C. Ribeiro et al.   FLORIDA ENTOMOLOGIST

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

A comparative analysis of complete mitochondrial genomes among Hexapoda

(2013) Sabrina Simon et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny

(2013) Matthias Bernt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Four Heat Shock Protein Genes of the Endoparasitoid Wasp, Cotesia vestalis, and Their Transcriptional Profiles in Relation to Developmental Stages and Temperature

(2013) Min Shi et al.   PLoS One

The first mitochondrial genome for the wasp superfamily Platygastroidea: the egg parasitoid Trissolcus basalis

(2012) Meng Mao et al.   GENOME

PartitionFinder: Combined Selection of Partitioning Schemes and Substitution Models for Phylogenetic Analyses

(2012) R. Lanfear et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mitochondrial genomes reveal the global phylogeography and dispersal routes of the migratory locust

(2012) CHUAN MA et al.   MOLECULAR ECOLOGY

Phylogenetically informative rearrangements in mitochondrial genomes of Coleoptera, and monophyly of aquatic elateriform beetles (Dryopoidea)

(2012) Martijn J.T.N. Timmermans et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Bioinformatics methods for the comparative analysis of metazoan mitochondrial genome sequences

(2012) Matthias Bernt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

What is the phylogenetic signal limit from mitogenomes? The reconciliation between mitochondrial and nuclear data in the Insecta class phylogeny

(2011) Gerard Talavera et al.   BMC EVOLUTIONARY BIOLOGY

Mitogenome Phylogenetics: The Impact of Using Single Regions and Partitioning Schemes on Topology, Substitution Rate and Divergence Time Estimation

(2011) Sebastián Duchêne et al.   PLoS One

Molecular phylogenetics of Braconidae (Hymenoptera: Ichneumonoidea), based on multiple nuclear genes, and implications for classification

(2011) BARBARA J. SHARANOWSKI et al.   SYSTEMATIC ENTOMOLOGY

Comparative mitogenomics of Braconidae (Insecta: Hymenoptera) and the phylogenetic utility of mitochondrial genomes with special reference to Holometabolous insects

(2010) Shu-jun Wei et al.   BMC GENOMICS

Ecdysozoan Mitogenomics: Evidence for a Common Origin of the Legged Invertebrates, the Panarthropoda

(2010) Omar Rota-Stabelli et al.   Genome Biology and Evolution

A Phylogenomic Approach to Resolve the Arthropod Tree of Life

(2010) K. Meusemann et al.   MOLECULAR BIOLOGY AND EVOLUTION

Revisiting the Insect Mitochondrial Molecular Clock: The Mid-Aegean Trench Calibration

(2010) A. Papadopoulou et al.   MOLECULAR BIOLOGY AND EVOLUTION

SoRT2: a tool for sorting genomes and reconstructing phylogenetic trees by reversals, generalized transpositions and translocations

(2010) Y.-L. Huang et al.   NUCLEIC ACIDS RESEARCH

TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations

(2010) Federico Abascal et al.   NUCLEIC ACIDS RESEARCH

New Views on Strand Asymmetry in Insect Mitochondrial Genomes

(2010) Shu-Jun Wei et al.   PLoS One

When phylogenetic assumptions are violated: base compositional heterogeneity and among-site rate variation in beetle mitochondrial phylogenomics

(2010) HOJUN SONG et al.   SYSTEMATIC ENTOMOLOGY

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

(2009) Nicolas Lartillot et al.   BIOINFORMATICS

The complete mitochondrial genome of Diadegma semiclausum (Hymenoptera: Ichneumonidae) indicates extensive independent evolutionary events

(2009) Shu-jun Wei et al.   GENOME

Characterization of 67 Mitochondrial tRNA Gene Rearrangements in the Hymenoptera Suggests That Mitochondrial tRNA Gene Position Is Selectively Neutral

(2009) M. Dowton et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenetic approaches for the analysis of mitochondrial genome sequence data in the Hymenoptera – A lineage with both rapidly and slowly evolving mitochondrial genomes

(2009) Mark Dowton et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Accounting for Calibration Uncertainty in Phylogenetic Estimation of Evolutionary Divergence Times

(2009) Simon Y. W. Ho et al.   SYSTEMATIC BIOLOGY

A Monte Carlo Approach Successfully Identifies Randomness in Multiple Sequence Alignments : A More Objective Means of Data Exclusion

(2009) Bernhard Misof et al.   SYSTEMATIC BIOLOGY

Immature Development of Cotesia vestalis (Hymenoptera: Braconidae), an Endoparasitoid of Plutella xylostella (Lepidoptera: Plutellidae)

(2008) Rui-Xian Yu et al.   ANNALS OF THE ENTOMOLOGICAL SOCIETY OF AMERICA

Evolution of the parasitic wasp subfamily Rogadinae (Braconidae): phylogeny and evolution of lepidopteran host ranges and mummy characteristics

(2008) Alejandro Zaldívar-Riverón et al.   BMC EVOLUTIONARY BIOLOGY

Mitochondrial genome organization and phylogeny of two vespid wasps

(2008) Stephen L. Cameron et al.   GENOME

Molecular phylogeny and historical biogeography of the cosmopolitan parasitic wasp subfamily Doryctinae (Hymenoptera�:�Braconidae)

(2008) Alejandro Zaldivar-Riverón et al.   INVERTEBRATE SYSTEMATICS

A preliminary molecular phylogeny of the Sigalphinae (Hymenoptera: Braconidae), includingPselaphanusSzépligeti, based on 28S rDNA, with descriptions of new Afrotropical and MadagascanMinangaandMalasigalphusspecies

(2008) Donald L. J. Quicke et al.   JOURNAL OF NATURAL HISTORY

Rapidly Evolving Mitochondrial Genome and Directional Selection in Mitochondrial Genes in the Parasitic Wasp Nasonia (Hymenoptera: Pteromalidae)

(2008) D. C. S. G. Oliveira et al.   MOLECULAR BIOLOGY AND EVOLUTION