Transcriptome analysis reveals the molecular mechanisms of heterosis on thermal resistance in hybrid abalone

An enhanced photosynthesis and carbohydrate metabolic capability contributes to heterosis of the cotton (Gossypium hirsutum) hybrid ‘Huaza Mian H318’, as revealed by genome-wide gene expression analysis

(2021) Yuanhao Ding et al.   BMC GENOMICS

Comparative transcriptome analysis of inbred lines and contrasting hybrids reveals overdominance mediate early biomass vigor in hybrid cotton

(2020) Kashif Shahzad et al.   BMC GENOMICS

Transcriptome profiles of F1 hybrids ( Acanthopagrus schlegelii ♂ ×  Pagrus major ♀) and parents reveal hybrid effects on individual development

(2020) Shuyin Chen et al.   AQUACULTURE RESEARCH

Gene expression differences between abalone that are susceptible and resilient to a simulated heat wave event

(2020) Brett P. Shiel et al.   AQUACULTURE

Sub‐low salinity impact on survival, growth and meat quality of the Pacific abalone ( Haliotis discus hannai ) and hybrids

(2020) Grace Afumwaa Boamah et al.   AQUACULTURE RESEARCH

Growth Performance and Transcriptomic Response of Warm-Acclimated Hybrid Abalone Haliotis rufescens (♀) × H. corrugata (♂)

(2020) M. A. Tripp-Valdez et al.   MARINE BIOTECHNOLOGY

Heterosis-associated genes confer high yield in super hybrid rice

(2020) Tianzi Lin et al.   THEORETICAL AND APPLIED GENETICS

The survival and respiration response of two abalones under short-term hypoxia challenges

(2020) Yawei Shen et al.   AQUACULTURE

Genome-wide profiling of alternative splicing genes in hybrid poplar (P.alba×P.glandulosa cv.84K) leaves

(2020) Ruixue Wang et al.   PLoS One

Different Transcriptomic Responses to Thermal Stress in Heat-Tolerant and Heat-Sensitive Pacific Abalones Indicated by Cardiac Performance

(2019) Nan Chen et al.   Frontiers in Physiology

Overdominance is the major genetic basis of lint yield heterosis in interspecific hybrids between G. hirsutum and G. barbadense

(2019) Shuhua Tian et al.   HEREDITY

Integrated analysis of transcriptomic, miRNA and proteomic changes of a novel hybrid yellow catfish uncovers key roles for miRNAs in heterosis

(2019) Guosong Zhang et al.   MOLECULAR & CELLULAR PROTEOMICS

Comparative transcriptome analysis reveals important roles of nonadditive genes in maize hybrid An’nong 591 under heat stress

(2019) Yang Zhao et al.   BMC PLANT BIOLOGY

Roles of Toll-Like Receptors in Nitroxidative Stress in Mammals

(2019) Yao Li et al.   Cells

OUP accepted manuscript

(2018)   BIOINFORMATICS

A new genomic prediction method with additive-dominance effects in the least-squares framework

(2018) Hailan Liu et al.   HEREDITY

Comparative Transcriptome Analysis Reveals Growth-Related Genes in Juvenile Chinese Sea Cucumber, Russian Sea Cucumber, and Their Hybrids

(2018) Zhicheng Wang et al.   MARINE BIOTECHNOLOGY

Mechanisms of thermal adaptation and evolutionary potential of conspecific populations to changing environments

(2018) Zhongqi Chen et al.   MOLECULAR ECOLOGY

Transcriptome analysis of wheat seedling and spike tissues in the hybrid Jingmai 8 uncovered genes involved in heterosis

(2018) Yong-jie Liu et al.   PLANTA

Transcriptome analysis of growth heterosis in pearl oyster Pinctada fucata martensii

(2018) Jingmiao Yang et al.   FEBS Open Bio

Heat stress induced alternative splicing in catfish as determined by transcriptome analysis

(2018) Suxu Tan et al.   Comparative Biochemistry and Physiology D-Genomics & Proteomics

A class B scavenger receptor from Eriocheir sinensis ( Es SR-B1) restricts bacteria proliferation by promoting phagocytosis

(2017) Yao-Meng Wu et al.   FISH & SHELLFISH IMMUNOLOGY

Comparative transcriptome analysis of flower heterosis in two soybean F1 hybrids by RNA-seq

(2017) Chunbao Zhang et al.   PLoS One

Transcriptome analysis of neo-tetraploid rice reveals specific differential gene expressions associated with fertility and heterosis

(2017) Haibin Guo et al.   Scientific Reports

Assessment of the thermal tolerance of abalone based on cardiac performance in Haliotis discus hannai , H. gigantea and their interspecific hybrid

(2016) Nan Chen et al.   AQUACULTURE

Aging and Autophagy in the Heart

(2016) Akihiro Shirakabe et al.   CIRCULATION RESEARCH

Enhanced salt tolerance in tomato plants constitutively expressing heat-shock protein in the endoplasmic reticulum

(2016) C. Fu et al.   GENETICS AND MOLECULAR RESEARCH

Temporal Shift of Circadian-Mediated Gene Expression and Carbon Fixation Contributes to Biomass Heterosis in Maize Hybrids

(2016) Dae Kwan Ko et al.   PLoS Genetics

MUC1 (CD227): a multi-tasked molecule

(2015) Vasso Apostolopoulos et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Scavenger receptor B protects shrimp from bacteria by enhancing phagocytosis and regulating expression of antimicrobial peptides

(2015) Wen-Jie Bi et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Proteomic analysis of muscle between hybrid abalone and parental lines Haliotis gigantea Reeve and Haliotis discus hannai Ino

(2015) G Di et al.   HEREDITY

Syk Is Recruited to Stress Granules and Promotes Their Clearance through Autophagy

(2015) Mariya O. Krisenko et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Ocean acidification exacerbates the impacts of global warming on embryonic little skate, Leucoraja erinacea (Mitchill)

(2015) Valentina Di Santo   JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY

RNA-seq reveals regional differences in transcriptome response to heat stress in the marine snailChlorostoma funebralis

(2015) Lani U. Gleason et al.   MOLECULAR ECOLOGY

StringTie enables improved reconstruction of a transcriptome from RNA-seq reads

(2015) Mihaela Pertea et al.   NATURE BIOTECHNOLOGY

HISAT: a fast spliced aligner with low memory requirements

(2015) Daehwan Kim et al.   NATURE METHODS

Effects of environmental and farm stress on abalone physiology: perspectives for abalone aquaculture in the face of global climate change

(2015) Andrea J. Morash et al.   Reviews in Aquaculture

Combining ability and heterosis analysis over two environments in a diallel cross of three families of the clam Meretrix meretrix

(2014) Ping Dai et al.   ACTA OCEANOLOGICA SINICA

rMATS: Robust and flexible detection of differential alternative splicing from replicate RNA-Seq data

(2014) Shihao Shen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular insights of the first gastropod TLR counterpart from disk abalone (Haliotis discus discus), revealing its transcriptional modulation under pathogenic stress

(2013) Don Anushka Sandaruwan Elvitigala et al.   FISH & SHELLFISH IMMUNOLOGY

Genomic and epigenetic insights into the molecular bases of heterosis

(2013) Z. Jeffrey Chen   NATURE REVIEWS GENETICS

Complexity of the Alternative Splicing Landscape in Plants

(2013) A. S. N. Reddy et al.   PLANT CELL

An Autoregulatory Loop Controlling Arabidopsis HsfA2 Expression: Role of Heat Shock-Induced Alternative Splicing

(2013) J. Liu et al.   PLANT PHYSIOLOGY

Transcriptome Analysis of Artificial Hybrid Pufferfish Jiyan-1 and Its Parental Species: Implications for Pufferfish Heterosis

(2013) Yang Gao et al.   PLoS One

Emerging molecular mechanisms for biotechnological harnessing of heterosis in crops

(2013) Peter C. McKeown et al.   TRENDS IN BIOTECHNOLOGY

Mitochondria and Mitophagy

(2012) Dieter A. Kubli et al.   CIRCULATION RESEARCH

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

(2012) Guangchuang Yu et al.   OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY

Genetic composition of yield heterosis in an elite rice hybrid

(2012) G. Zhou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Extensive changes to alternative splicing patterns following allopolyploidy in natural and resynthesized polyploids

(2011) R. Zhou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Environmentally induced oxidative stress in aquatic animals

(2010) Volodymyr I. Lushchak   AQUATIC TOXICOLOGY

A Dorsal homolog (FcDorsal) in the Chinese shrimp Fenneropenaeus chinensis is responsive to both bacteria and WSSV challenge

(2010) Fuhua Li et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Endoplasmic Reticulum Protein Quality Control and Its Relationship to Environmental Stress Responses in Plants

(2010) Jian-Xiang Liu et al.   PLANT CELL

The Impact of Climate Change on the World's Marine Ecosystems

(2010) O. Hoegh-Guldberg et al.   SCIENCE

Signalling Pathway Involving GULP, MAPK and Rac1 for SR-BI-Induced Phagocytosis of Apoptotic Cells

(2009) Y. Osada et al.   JOURNAL OF BIOCHEMISTRY

Transcriptomic profiling of mature embryo from an elite super-hybrid rice LYP9 and its parental lines

(2008) Xiaomeng Ge et al.   BMC PLANT BIOLOGY

Alternative isoform regulation in human tissue transcriptomes

(2008) Eric T. Wang et al.   NATURE