Growth Performance and Transcriptomic Response of Warm-Acclimated Hybrid Abalone Haliotis rufescens (♀) × H. corrugata (♂)

De novo transcriptome assembly and gene expression profile of thermally challenged green abalone (Haliotis fulgens: Gastropoda) under acute hypoxia and hypercapnia

(2019) Miguel A. Tripp-Valdez et al.   Marine Genomics

Cellular stress responses to chronic heat shock and shell damage in temperate Mya truncata

(2018) Victoria A. Sleight et al.   CELL STRESS & CHAPERONES

Hybridization improved bacteria resistance in abalone: Evidence from physiological and molecular responses

(2018) Shuang Liang et al.   FISH & SHELLFISH IMMUNOLOGY

Withering syndrome susceptibility of northeastern Pacific abalones: A complex relationship with phylogeny and thermal experience

(2018) Lisa M. Crosson et al.   JOURNAL OF INVERTEBRATE PATHOLOGY

Local oceanographic variability influences the performance of juvenile abalone under climate change

(2018) C. A. Boch et al.   Scientific Reports

Transcriptomic responses to extreme low salinity among locally adapted populations of Olympia oyster (Ostrea lurida )

(2018) Ashley Maynard et al.   MOLECULAR ECOLOGY

Cytoscape StringApp: Network Analysis and Visualization of Proteomics Data

(2018) Nadezhda T. Doncheva et al.   JOURNAL OF PROTEOME RESEARCH

Transcriptomic and metabolic response to chronic and acute thermal exposure of juvenile geoduck clams Panopea globosa

(2018) Oscar E. Juárez et al.   Marine Genomics

The transcriptional response of the Pacific oyster Crassostrea gigas against acute heat stress

(2017) Chuanyan Yang et al.   FISH & SHELLFISH IMMUNOLOGY

Epipodial Tentacle Gene Expression and Predetermined Resilience to Summer Mortality in the Commercially Important Greenlip Abalone, Haliotis laevigata

(2017) Brett P. Shiel et al.   MARINE BIOTECHNOLOGY

Transcriptomic analysis of Crassostrea sikamea × Crassostrea angulata hybrids in response to low salinity stress

(2017) Lulu Yan et al.   PLoS One

Assessment of the thermal tolerance of abalone based on cardiac performance in Haliotis discus hannai , H. gigantea and their interspecific hybrid

(2016) Nan Chen et al.   AQUACULTURE

TransRate: reference-free quality assessment of de novo transcriptome assemblies

(2016) Richard Smith-Unna et al.   GENOME RESEARCH

Genomic evidence for ecological divergence against a background of population homogeneity in the marine snail Chlorostoma funebralis

(2016) Lani U. Gleason et al.   MOLECULAR ECOLOGY

Uncovering the Complex Transcriptome Response of Mytilus chilensis against Saxitoxin: Implications of Harmful Algal Blooms on Mussel Populations

(2016) Camille Detree et al.   PLoS One

Experimental hybridization and genetic identification of Pacific abalone Haliotis discus hannai and green abalone H. fulgens

(2015) Weiwei You et al.   AQUACULTURE

The effects of elevatedpCO2on growth, shell production and metabolism of cultured juvenile abalone,Haliotis iris

(2015) Shaun C Cunningham et al.   AQUACULTURE RESEARCH

Differentially-Expressed Genes Associated with Faster Growth of the Pacific Abalone, Haliotis discus hannai

(2015) Mi-Jin Choi et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Characterization of the growth-related transcriptome in California red abalone (Haliotis rufescens) through RNA-Seq analysis

(2015) Diego Valenzuela-Miranda et al.   Marine Genomics

Necroptotic Cell Death Signaling and Execution Pathway: Lessons from Knockout Mice

(2015) José Belizário et al.   MEDIATORS OF INFLAMMATION

Effects of environmental and farm stress on abalone physiology: perspectives for abalone aquaculture in the face of global climate change

(2015) Andrea J. Morash et al.   Reviews in Aquaculture

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

The role of hybridization in improving the immune response and thermal tolerance of abalone

(2014) Shuang Liang et al.   FISH & SHELLFISH IMMUNOLOGY

Interactive effects of elevated temperature and CO2 levels on metabolism and oxidative stress in two common marine bivalves (Crassostrea virginica and Mercenaria mercenaria)

(2013) Omera B. Matoo et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY A-MOLECULAR & INTEGRATIVE PHYSIOLOGY

Energy-Limited Tolerance to Stress as a Conceptual Framework to Integrate the Effects of Multiple Stressors

(2013) I. M. Sokolova   INTEGRATIVE AND COMPARATIVE BIOLOGY

Genomic and epigenetic insights into the molecular bases of heterosis

(2013) Z. Jeffrey Chen   NATURE REVIEWS GENETICS

Pfam: the protein families database

(2013) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Identification of molecular and physiological responses to chronic environmental challenge in an invasive species: the Pacific oyster,Crassostrea gigas

(2013) Melody S. Clark et al.   Ecology and Evolution

Hybridization betweenHaliotis rufescensandHaliotis discus hannai: evaluation of fertilization, larval development, growth and thermal tolerance

(2012) Fabiola Lafarga-De la Cruz et al.   AQUACULTURE RESEARCH

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Involvement of oxidative stress and mitogen-activated protein kinase signaling pathways in heat stress-induced injury in the rat small intestine

(2012) Jin Yu et al.   STRESS-THE INTERNATIONAL JOURNAL ON THE BIOLOGY OF STRESS

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Proteomic response to elevated PCO2 level in eastern oysters, Crassostrea virginica: evidence for oxidative stress

(2011) L. Tomanek et al.   JOURNAL OF EXPERIMENTAL BIOLOGY

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

Intraspecies and interspecies hybrids in Haliotis: natural and experimental evidence and its impact on abalone aquaculture

(2011) Fabiola Lafarga de la Cruz et al.   Reviews in Aquaculture

DNA methylation patterns provide insight into epigenetic regulation in the Pacific oyster (Crassostrea gigas)

(2010) Mackenzie R Gavery et al.   BMC GENOMICS

First molecular cloning of a molluscan caspase from variously colored abalone (Haliotis diversicolor) and gene expression analysis with bacterial challenge

(2010) Wei-Bin Huang et al.   FISH & SHELLFISH IMMUNOLOGY

World Abalone Supply, Markets, and Pricing

(2010) Peter A. Cook et al.   JOURNAL OF SHELLFISH RESEARCH

Response of cold-acclimated, farmed South African abalone (Haliotis midae) to short-term and long-term changes in temperature

(2010) Daléne Vosloo et al.   JOURNAL OF THERMAL BIOLOGY

Growth and survival of three small abaloneHaliotis diversicolorpopulations and their reciprocal crosses

(2009) Wei-Wei You et al.   AQUACULTURE RESEARCH

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Triggers of the HSP70 stress response: environmental responses and laboratory manipulation in an Antarctic marine invertebrate (Nacella concinna)

(2009) Melody S. Clark et al.   CELL STRESS & CHAPERONES

Transcriptional analysis of antioxidant and immune defense genes in disk abalone (Haliotis discus discus) during thermal, low-salinity and hypoxic stress

(2009) Mahanama De Zoysa et al.   COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY B-BIOCHEMISTRY & MOLECULAR BIOLOGY

Transcriptomic responses to heat stress and bleaching in the elkhorn coral Acropora palmata

(2009) MK DeSalvo et al.   MARINE ECOLOGY PROGRESS SERIES

Analysis of the Decline of the Abalone Fishery (Haliotis fulgens and H. corrugata) along the Westcentral Coast of the Baja California Peninsula, Mexico

(2008) Enrique Morales-Bojórquez et al.   JOURNAL OF SHELLFISH RESEARCH