Single mosquito metatranscriptomics identifies vectors, emerging pathogens and reservoirs in one assay

The importance of vector control for the control and elimination of vector-borne diseases

(2020) Anne L. Wilson et al.   PLoS Neglected Tropical Diseases

Metagenomic sequencing with spiked primer enrichment for viral diagnostics and genomic surveillance

(2020) Xianding Deng et al.   Nature Microbiology

Stability of the Virome in Lab- and Field-Collected Aedes albopictus Mosquitoes across Different Developmental Stages and Possible Core Viruses in the Publicly Available Virome Data of Aedes Mosquitoes

(2020) Chenyan Shi et al.   mSystems

Microbiota variations in Culex nigripalpus disease vector mosquito of West Nile virus and Saint Louis Encephalitis from different geographic origins

(2019) Dagne Duguma et al.   PeerJ

Past and future spread of the arbovirus vectors Aedes aegypti and Aedes albopictus

(2019) Moritz U. G. Kraemer et al.   Nature Microbiology

Mosquito Small RNA Responses to West Nile and Insect-Specific Virus Infections in Aedes and Culex Mosquito Cells

(2019) Giel Göertz et al.   Viruses-Basel

Anopheles mosquito surveillance in Madagascar reveals multiple blood feeding behavior and Plasmodium infection

(2019) Riley E. Tedrow et al.   PLoS Neglected Tropical Diseases

The discovery and global distribution of novel mosquito‐associated viruses in the last decade (2007‐2017)

(2019) Evans Atoni et al.   REVIEWS IN MEDICAL VIROLOGY

Stable distinct core eukaryotic viromes in different mosquito species from Guadeloupe, using single mosquito viral metagenomics

(2019) Chenyan Shi et al.   Microbiome

Windborne long-distance migration of malaria mosquitoes in the Sahel

(2019) Diana L. Huestis et al.   NATURE

Vertical transmission in Caenorhabditis nematodes of RNA molecules encoding a viral RNA-dependent RNA polymerase

(2019) Aurélien Richaud et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Meta-Transcriptomic Comparison of the RNA Viromes of the Mosquito Vectors Culex pipiens and Culex torrentium in Northern Europe

(2019) Pettersson et al.   Viruses-Basel

Three New Orbivirus Species Isolated from Farmed White-Tailed Deer (Odocoileus virginianus) in the United States

(2019) Mohammad Shamim Ahasan et al.   Viruses-Basel

Ecology of West Nile Virus in the Danube Delta, Romania: Phylogeography, Xenosurveillance and Mosquito Host-Feeding Patterns

(2019) Alexandru Tomazatos et al.   Viruses-Basel

Novel RNA viruses associated with Plasmodium vivax in human malaria and Leucocytozoon parasites in avian disease

(2019) Justine Charon et al.   PLoS Pathogens

Metagenomic Virome Analysis of Culex Mosquitoes from Kenya and China

(2018) Evans Atoni et al.   Viruses-Basel

Comparative Metagenomic Profiling of Viromes Associated with Four Common Mosquito Species in China

(2018) Han Xia et al.   VIROLOGICA SINICA

Identification of Culex pipiens Complex Mosquitoes in a Hybrid Zone of West Nile Virus Transmission in Fresno County, California

(2018) Rory D. McAbee et al.   AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE

Virome of > 12 thousand Culex mosquitoes from throughout California

(2018) Mohammadreza Sadeghi et al.   VIROLOGY

Metagenomic sequencing suggests a diversity of RNA interference-like responses to viruses across multicellular eukaryotes

(2018) Fergal M. Waldron et al.   PLoS Genetics

Barcoding blood meals: New vertebrate-specific primer sets for assigning taxonomic identities to host DNA from mosquito blood meals

(2018) Lawrence E. Reeves et al.   PLoS Neglected Tropical Diseases

Global, regional, and national incidence, prevalence, and years lived with disability for 354 diseases and injuries for 195 countries and territories, 1990–2017: a systematic analysis for the Global Burden of Disease Study 2017

(2018) Spencer L James et al.   LANCET

Global, regional, and national disability-adjusted life-years (DALYs) for 359 diseases and injuries and healthy life expectancy (HALE) for 195 countries and territories, 1990–2017: a systematic analysis for the Global Burden of Disease Study 2017

(2018) Hmwe Hmwe Kyu et al.   LANCET

Global, regional, and national age-sex-specific mortality for 282 causes of death in 195 countries and territories, 1980–2017: a systematic analysis for the Global Burden of Disease Study 2017

(2018) Gregory A Roth et al.   LANCET

Metagenomic Sequencing From Mosquitoes in China Reveals a Variety of Insect and Human Viruses

(2018) Pengpeng Xiao et al.   Frontiers in Cellular and Infection Microbiology

Metagenomic Analysis of Flaviviridae in Mosquito Viromes Isolated From Yunnan Province in China Reveals Genes From Dengue and Zika Viruses

(2018) Pengpeng Xiao et al.   Frontiers in Cellular and Infection Microbiology

High-Resolution Metatranscriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia

(2017) Mang Shi et al.   JOURNAL OF VIROLOGY

Effective mosquito and arbovirus surveillance using metabarcoding

(2017) J. Batovska et al.   Molecular Ecology Resources

Mosquito vector-associated microbiota: Metabarcoding bacteria and eukaryotic symbionts across habitat types in Thailand endemic for dengue and other arthropod-borne diseases

(2017) Panpim Thongsripong et al.   Ecology and Evolution

A Review of Bioinformatics Tools for Bio-Prospecting from Metagenomic Sequence Data

(2017) Despoina D. Roumpeka et al.   Frontiers in Genetics

Bioinformatic Characterization of Mosquito Viromes within the Eastern United States and Puerto Rico: Discovery of Novel Viruses

(2016) Kenneth G. Frey et al.   Evolutionary Bioinformatics

Redefining the invertebrate RNA virosphere

(2016) Mang Shi et al.   NATURE

West African Anopheles gambiae mosquitoes harbor a taxonomically diverse virome including new insect-specific flaviviruses, mononegaviruses, and totiviruses

(2016) Joseph R. Fauver et al.   VIROLOGY

Identification of Avian and Hemoparasite DNA in Blood-Engorged Abdomens of Culex pipiens (Diptera; Culicidae) from a West Nile Virus Epidemic region in Suburban Chicago, Illinois

(2015) E. Boothe et al.   JOURNAL OF MEDICAL ENTOMOLOGY

Sequence-independent characterization of viruses based on the pattern of viral small RNAs produced by the host

(2015) Eric Roberto Guimarães Rocha Aguiar et al.   NUCLEIC ACIDS RESEARCH

Xenosurveillance: A Novel Mosquito-Based Approach for Examining the Human-Pathogen Landscape

(2015) Nathan D. Grubaugh et al.   PLoS Neglected Tropical Diseases

Unprecedented genomic diversity of RNA viruses in arthropods reveals the ancestry of negative-sense RNA viruses

(2015) Ci-Xiu Li et al.   eLife

RNA shotgun metagenomic sequencing of northern California (USA) mosquitoes uncovers viruses, bacteria, and fungi

(2015) James Angus Chandler et al.   Frontiers in Microbiology

A Metagenomic Survey of Viral Abundance and Diversity in Mosquitoes from Hubei Province

(2015) Chenyan Shi et al.   PLoS One

The Evolution and Genetics of Virus Host Shifts

(2014) Ben Longdon et al.   PLoS Pathogens

West Nile Virus: Review of the Literature

(2013) Lyle R. Petersen et al.   JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION

Mobuck virus genome sequence and phylogenetic analysis: identification of a novel Orbivirus isolated from a white-tailed deer in Missouri, USA

(2013) E. Cooper et al.   JOURNAL OF GENERAL VIROLOGY

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

Biopython: freely available Python tools for computational molecular biology and bioinformatics

(2009) P. J. A. Cock et al.   BIOINFORMATICS

A Wolbachia Symbiont in Aedes aegypti Limits Infection with Dengue, Chikungunya, and Plasmodium

(2009) Luciano A. Moreira et al.   CELL

Wolbachia: master manipulators of invertebrate biology

(2008) John H. Werren et al.   NATURE REVIEWS MICROBIOLOGY