Functional redundancy and specific taxa modulate the contribution of prokaryotic diversity and composition to multifunctionality

Plant communities mediate the interactive effects of invasion and drought on soil microbial communities

(2020) Catherine Fahey et al.   ISME Journal

Warming-induced permafrost thaw exacerbates tundra soil carbon decomposition mediated by microbial community

(2020) Jiajie Feng et al.   Microbiome

Multiple elements of soil biodiversity drive ecosystem functions across biomes

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Changes in the environmental microbiome in the Anthropocene

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Climate mediates continental scale patterns of stream microbial functional diversity

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Climate change microbiology — problems and perspectives

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Increased microbial growth, biomass and turnover drive soil organic carbon accumulation at higher plant diversity

(2019) Judith Prommer et al.   GLOBAL CHANGE BIOLOGY

Impacts of long‐term elevated atmospheric CO 2 concentrations on communities of arbuscular mycorrhizal fungi

(2019) Irena Maček et al.   MOLECULAR ECOLOGY

Microdiversity ensures the maintenance of functional microbial communities under changing environmental conditions

(2019) Natalia García-García et al.   ISME Journal

The global soil community and its influence on biogeochemistry

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The role of multiple global change factors in driving soil functions and microbial biodiversity

(2019) Matthias C. Rillig et al.   SCIENCE

Fungal-bacterial diversity and microbiome complexity predict ecosystem functioning

(2019) Cameron Wagg et al.   Nature Communications

A meta-analysis of global fungal distribution reveals climate-driven patterns

(2019) Tomáš Větrovský et al.   Nature Communications

Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling

(2019) Jennifer E. Schmidt et al.   Microbiome

Decreasing diversity of rare bacterial subcommunities relates to dissolved organic matter along permafrost thawing gradients

(2019) Lei Zhou et al.   ENVIRONMENT INTERNATIONAL

Long-term nutrient inputs shift soil microbial functional profiles of phosphorus cycling in diverse agroecosystems

(2019) Zhongmin Dai et al.   ISME Journal

A strong link between marine microbial community composition and function challenges the idea of functional redundancy

(2018) Pierre E. Galand et al.   ISME Journal

A global atlas of the dominant bacteria found in soil

(2018) Manuel Delgado-Baquerizo et al.   SCIENCE

Abundance determines the functional role of bacterial phylotypes in complex communities

(2018) Damian W. Rivett et al.   Nature Microbiology

Structure and function of the global topsoil microbiome

(2018) Mohammad Bahram et al.   NATURE

Understanding how microbiomes influence the systems they inhabit

(2018) Ed K. Hall et al.   Nature Microbiology

Ectomycorrhizal fungi inoculation alleviates simulated acid rain effects on soil ammonia oxidizers and denitrifiers in Masson pine forest

(2018) Yan Li et al.   ENVIRONMENTAL MICROBIOLOGY

Decomposition responses to climate depend on microbial community composition

(2018) Sydney I. Glassman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impacts of species richness on productivity in a large-scale subtropical forest experiment

(2018) Yuanyuan Huang et al.   SCIENCE

Fungal diversity regulates plant-soil feedbacks in temperate grassland

(2018) Marina Semchenko et al.   Science Advances

Microbial richness and composition independently drive soil multifunctionality

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Embracing the unknown: disentangling the complexities of the soil microbiome

(2017) Noah Fierer   NATURE REVIEWS MICROBIOLOGY

Effects of multiple dimensions of bacterial diversity on functioning, stability and multifunctionality

(2016) Fabian Roger et al.   ECOLOGY

Long-Term Effects of Multiwalled Carbon Nanotubes and Graphene on Microbial Communities in Dry Soil

(2016) Yuan Ge et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Effectiveness of ecological rescue for altered soil microbial communities and functions

(2016) Kadiya Calderón et al.   ISME Journal

Lack of functional redundancy in the relationship between microbial diversity and ecosystem functioning

(2016) Manuel Delgado-Baquerizo et al.   JOURNAL OF ECOLOGY

The active microbial diversity drives ecosystem multifunctionality and is physiologically related to carbon availability in Mediterranean semi-arid soils

(2016) Felipe Bastida et al.   MOLECULAR ECOLOGY

Decoupling function and taxonomy in the global ocean microbiome

(2016) S. Louca et al.   SCIENCE

Temperature mediates continental-scale diversity of microbes in forest soils

(2016) Jizhong Zhou et al.   Nature Communications

Microbial diversity drives multifunctionality in terrestrial ecosystems

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Xylan Utilization Regulon in Xanthomonas citri pv. citri Strain 306: Gene Expression and Utilization of Oligoxylosides

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The extent of functional redundancy changes as species’ roles shift in different environments

(2015) Ingo Fetzer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Microbial mediation of biogeochemical cycles revealed by simulation of global changes with soil transplant and cropping

(2014) Mengxin Zhao et al.   ISME Journal

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(2014) Richard D. Bardgett et al.   NATURE

Endemism and functional convergence across the North American soil mycobiome

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Changes in community assembly may shift the relationship between biodiversity and ecosystem function

(2014) Joseph E. Knelman et al.   Frontiers in Microbiology

Loss in microbial diversity affects nitrogen cycling in soil

(2013) Laurent Philippot et al.   ISME Journal

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

The xylan utilization system of the plant pathogenXanthomonas campestrispvcampestriscontrols epiphytic life and reveals common features with oligotrophic bacteria and animal gut symbionts

(2013) Guillaume Déjean et al.   NEW PHYTOLOGIST

Links between metabolic plasticity and functional redundancy in freshwater bacterioplankton communities

(2013) Jérôme Comte et al.   Frontiers in Microbiology

Identification of Soil Bacteria Susceptible to TiO2and ZnO Nanoparticles

(2012) Yuan Ge et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

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(2012) Bradley J. Cardinale et al.   NATURE

Soil Functional Operating Range Linked to Microbial Biodiversity and Community Composition Using Denitrifiers as Model Guild

(2012) Sara Hallin et al.   PLoS One

Cooperation, Competition, and Coalitions in Enzyme-Producing Microbes: Social Evolution and Nutrient Depolymerization Rates

(2012) Henry J. Folse et al.   Frontiers in Microbiology

High plant diversity is needed to maintain ecosystem services

(2011) Forest Isbell et al.   NATURE

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(2010) Hannes Peter et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

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PyNAST: a flexible tool for aligning sequences to a template alignment

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Linking soil bacterial diversity to ecosystem multifunctionality using backward-elimination boosted trees analysis

(2009) Ji-Zheng He et al.   JOURNAL OF SOILS AND SEDIMENTS

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

The influence of time, storage temperature, and substrate age on potential soil enzyme activity in acidic forest soils using MUB-linked substrates and l-DOPA

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Resistance, resilience, and redundancy in microbial communities

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