Temperature mediates continental-scale diversity of microbes in forest soils

Phasing amplicon sequencing on Illumina Miseq for robust environmental microbial community analysis

(2015) Liyou Wu et al.   BMC MICROBIOLOGY

Metabolic dependence of phytoplankton species richness

(2015) A. M. Segura et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Plant diversity increases soil microbial activity and soil carbon storage

(2015) Markus Lange et al.   Nature Communications

Interactions between temperature and nutrients across levels of ecological organization

(2014) Wyatt F. Cross et al.   GLOBAL CHANGE BIOLOGY

Stochasticity, succession, and environmental perturbations in a fluidic ecosystem

(2014) Jizhong Zhou et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Soil biodiversity and soil community composition determine ecosystem multifunctionality

(2014) C. Wagg et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Large-scale geographic patterns of diversity and community structure of pelagic crustacean zooplankton in Canadian lakes

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Why are there so many species in the tropics?

(2013) James H. Brown   JOURNAL OF BIOGEOGRAPHY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Temperature Drives the Continental-Scale Distribution of Key Microbes in Topsoil Communities

(2013) F. Garcia-Pichel et al.   SCIENCE

What causes latitudinal gradients in species diversity? Evolutionary processes and ecological constraints on swallowtail biodiversity

(2012) Fabien L. Condamine et al.   ECOLOGY LETTERS

Testing the metabolic theory of ecology

(2012) Charles A. Price et al.   ECOLOGY LETTERS

New primers to amplify the fungal ITS2 region - evaluation by 454-sequencing of artificial and natural communities

(2012) Katarina Ihrmark et al.   FEMS MICROBIOLOGY ECOLOGY

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

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Does warming enhance the effect of microzooplankton grazing on marine phytoplankton in the ocean?

(2012) Bingzhang Chen et al.   LIMNOLOGY AND OCEANOGRAPHY

Global distribution of microbial abundance and biomass in subseafloor sediment

(2012) J. Kallmeyer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biodiversity impacts ecosystem productivity as much as resources, disturbance, or herbivory

(2012) D. Tilman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

UCHIME improves sensitivity and speed of chimera detection

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FLASH: fast length adjustment of short reads to improve genome assemblies

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The bacterial biogeography of British soils

(2011) Robert I. Griffiths et al.   ENVIRONMENTAL MICROBIOLOGY

Btrim: A fast, lightweight adapter and quality trimming program for next-generation sequencing technologies

(2011) Yong Kong   GENOMICS

Reproducibility and quantitation of amplicon sequencing-based detection

(2011) Jizhong Zhou et al.   ISME Journal

Consequences of climate change on the tree of life in Europe

(2011) Wilfried Thuiller et al.   NATURE

Evolving ecological networks and the emergence of biodiversity patterns across temperature gradients

(2011) J. C. Stegen et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Microbial mediation of carbon-cycle feedbacks to climate warming

(2011) Jizhong Zhou et al.   Nature Climate Change

Picante: R tools for integrating phylogenies and ecology

(2010) S. W. Kembel et al.   BIOINFORMATICS

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

Why are metabolic scaling exponents so controversial? Quantifying variance and testing hypotheses

(2010) Nick J. B. Isaac et al.   ECOLOGY LETTERS

Soil bacterial diversity in the Arctic is not fundamentally different from that found in other biomes

(2010) Haiyan Chu et al.   ENVIRONMENTAL MICROBIOLOGY

Species sorting affects bacterioplankton community composition as determined by 16S rDNA and 16S rRNA fingerprints

(2010) Jürg B Logue et al.   ISME Journal

Global metabolic impacts of recent climate warming

(2010) Michael E. Dillon et al.   NATURE

Climate change, biotic interactions and ecosystem services

(2010) J. M. Montoya et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

FastTree 2 – Approximately Maximum-Likelihood Trees for Large Alignments

(2010) Morgan N. Price et al.   PLoS One

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

Temperature dependence, spatial scale, and tree species diversity in eastern Asia and North America

(2009) Z. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Phylocom: software for the analysis of phylogenetic community structure and trait evolution

(2008) Campbell O. Webb et al.   BIOINFORMATICS

A latitudinal diversity gradient in planktonic marine bacteria

(2008) J. A. Fuhrman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Impacts of climate warming on terrestrial ectotherms across latitude

(2008) C. A. Deutsch et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA