Effects of multiple dimensions of bacterial diversity on functioning, stability and multifunctionality

Resource pulses can alleviate the biodiversity–invasion relationship in soil microbial communities

(2015) Cyrus A. Mallon et al.   ECOLOGY

Disentangling seasonal bacterioplankton population dynamics by high-frequency sampling

(2015) Markus V. Lindh et al.   ENVIRONMENTAL MICROBIOLOGY

Species richness, but not phylogenetic diversity, influences community biomass production and temporal stability in a re-examination of 16 grassland biodiversity studies

(2015) Patrick Venail et al.   FUNCTIONAL ECOLOGY

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Microbial Community Composition and Diversity via 16S rRNA Gene Amplicons: Evaluating the Illumina Platform

(2015) Lucas Sinclair et al.   PLoS One

Biodiversity enhances ecosystem multifunctionality across trophic levels and habitats

(2015) Jonathan S. Lefcheck et al.   Nature Communications

Phylogenetic distance does not predict competition in green algal communities

(2015) H. R. Naughton et al.   Ecosphere

Context dependency and saturating effects of loss of rare soil microbes on plant productivity

(2015) W. H. Gera Hol et al.   Frontiers in Plant Science

Biodiversity acts as insurance of productivity of bacterial communities under abiotic perturbations

(2014) Ashutosh Awasthi et al.   ISME Journal

Marine biodiversity and ecosystem functioning: what's known and what's next?

(2014) Lars Gamfeldt et al.   OIKOS

Bacterial diversity and composition during rain events with and without Saharan dust influence reaching a high mountain lake in the Alps

(2014) Hannes Peter et al.   Environmental Microbiology Reports

Decomposing phylodiversity

(2014) Eric Marcon et al.   Methods in Ecology and Evolution

Different diversity-functioning relationship in lake and stream bacterial communities

(2013) Irene Ylla et al.   FEMS MICROBIOLOGY ECOLOGY

Loss in microbial diversity affects nitrogen cycling in soil

(2013) Laurent Philippot et al.   ISME Journal

Ribosomal Database Project: data and tools for high throughput rRNA analysis

(2013) James R. Cole et al.   NUCLEIC ACIDS RESEARCH

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Microbial Diversity and Structure Are Drivers of the Biological Barrier Effect against Listeria monocytogenes in Soil

(2013) Anne-Laure Vivant et al.   PLoS One

Experimental evidence that evolutionarily diverse assemblages result in higher productivity

(2013) M. W. Cadotte   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Biological 12C–13C fractionation increases with increasing community-complexity in soil microcosms

(2013) Weijun Yang et al.   SOIL BIOLOGY & BIOCHEMISTRY

Stability of soil microbial structure and activity depends on microbial diversity

(2013) Vincent Tardy et al.   Environmental Microbiology Reports

Impact of microbial diversity depletion on xenobiotic degradation by sewage-activated sludge

(2013) Guillermina Hernandez-Raquet et al.   Environmental Microbiology Reports

Soil microbial diversity affects soil organic matter decomposition in a silty grassland soil

(2012) Karen Baumann et al.   BIOGEOCHEMISTRY

Growing Unculturable Bacteria

(2012) E. J. Stewart   JOURNAL OF BACTERIOLOGY

Contrasted Effects of Diversity and Immigration on Ecological Insurance in Marine Bacterioplankton Communities

(2012) Thierry Bouvier et al.   PLoS One

Microbial diversity determines the invasion of soil by a bacterial pathogen

(2012) J. D. van Elsas et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The functional role of producer diversity in ecosystems

(2011) Bradley J. Cardinale et al.   AMERICAN JOURNAL OF BOTANY

The Rare Bacterial Biosphere

(2011) Carlos Pedrós-Alió   Annual Review of Marine Science

A Guide to the Natural History of Freshwater Lake Bacteria

(2011) R. J. Newton et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Multifunctionality and Diversity in Bacterial Biofilms

(2011) Hannes Peter et al.   PLoS One

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

NeatMap - non-clustering heat map alternatives in R

(2010) Satwik Rajaram et al.   BMC BIOINFORMATICS

Reduction of rare soil microbes modifies plant-herbivore interactions

(2010) W. H. Gera Hol et al.   ECOLOGY LETTERS

Function-specific response to depletion of microbial diversity

(2010) Hannes Peter et al.   ISME Journal

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Phylogenetic diversity measures based on Hill numbers

(2010) A. Chao et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Bacterial Biodiversity-Ecosystem Functioning Relations Are Modified by Environmental Complexity

(2010) Silke Langenheder et al.   PLoS One

PyNAST: a flexible tool for aligning sequences to a template alignment

(2009) J. G. Caporaso et al.   BIOINFORMATICS

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

(2009) M. N. Price et al.   MOLECULAR BIOLOGY AND EVOLUTION

Using Phylogenetic, Functional and Trait Diversity to Understand Patterns of Plant Community Productivity

(2009) Marc W. Cadotte et al.   PLoS One

An evaluation of the functional significance of peat microorganisms using a reciprocal transplant approach

(2009) Pedro A. Dimitriu et al.   SOIL BIOLOGY & BIOCHEMISTRY

MULTIPLE FUNCTIONS INCREASE THE IMPORTANCE OF BIODIVERSITY FOR OVERALL ECOSYSTEM FUNCTIONING

(2008) Lars Gamfeldt et al.   ECOLOGY