Impacts of long‐term elevated atmospheric CO 2 concentrations on communities of arbuscular mycorrhizal fungi

Reduced Summer Aboveground Productivity in Temperate C3 Grasslands Under Future Climate Regimes

(2018) Wolfgang A. Obermeier et al.   Earths Future

Biomass responses in a temperate European grassland through 17 years of elevated CO2

(2017) Louise C. Andresen et al.   GLOBAL CHANGE BIOLOGY

A population genomics approach shows widespread geographical distribution of cryptic genomic forms of the symbiotic fungus Rhizophagus irregularis

(2017) Romain Savary et al.   ISME Journal

Where, when and how plant-soil feedback matters in a changing world

(2016) Wim H. van der Putten et al.   FUNCTIONAL ECOLOGY

Resilience of Fungal Communities to Elevated CO2

(2016) Stavros D. Veresoglou et al.   MICROBIAL ECOLOGY

CO2 studies remain key to understanding a future world

(2016) Katie M. Becklin et al.   NEW PHYTOLOGIST

Spring to autumn changes in the arbuscular mycorrhizal fungal community composition in the different propagule types associated to a Mediterranean shrubland

(2016) Sara Varela-Cervero et al.   PLANT AND SOIL

Reduced CO2 fertilization effect in temperate C3 grasslands under more extreme weather conditions

(2016) W. A. Obermeier et al.   Nature Climate Change

More extreme precipitation in the world’s dry and wet regions

(2016) Markus G. Donat et al.   Nature Climate Change

VSEARCH: a versatile open source tool for metagenomics

(2016) Torbjørn Rognes et al.   PeerJ

Fitting Linear Mixed-Effects Models Usinglme4

(2015) Douglas Bates et al.   Journal of Statistical Software

Fungi in the future: interannual variation and effects of atmospheric change on arbuscular mycorrhizal fungal communities

(2015) T. E. Anne Cotton et al.   NEW PHYTOLOGIST

Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform

(2015) Melanie Schirmer et al.   NUCLEIC ACIDS RESEARCH

Global assessment of arbuscular mycorrhizal fungus diversity reveals very low endemism

(2015) J. Davison et al.   SCIENCE

Toward accurate molecular identification of species in complex environmental samples: testing the performance of sequence filtering and clustering methods

(2015) Jullien M. Flynn et al.   Ecology and Evolution

Anthropogenic land use shapes the composition and phylogenetic structure of soil arbuscular mycorrhizal fungal communities

(2014) Mari Moora et al.   FEMS MICROBIOLOGY ECOLOGY

Species richness of arbuscular mycorrhizal fungi: associations with grassland plant richness and biomass

(2014) Inga Hiiesalu et al.   NEW PHYTOLOGIST

Fungal nutrient allocation in common mycorrhizal networks is regulated by the carbon source strength of individual host plants

(2014) Carl R. Fellbaum et al.   NEW PHYTOLOGIST

Disentangling root responses to climate change in a semiarid grassland

(2014) Yolima Carrillo et al.   OECOLOGIA

Model-based thinking for community ecology

(2014) David I. Warton et al.   PLANT ECOLOGY

What Goes in Must Come out: Testing for Biases in Molecular Analysis of Arbuscular Mycorrhizal Fungal Communities

(2014) T. E. Anne Cotton et al.   PLoS One

Choosing and using diversity indices: insights for ecological applications from the German Biodiversity Exploratories

(2014) E. Kathryn Morris et al.   Ecology and Evolution

Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible

(2014) Paul J. McMurdie et al.   PLoS Computational Biology

PEAR: a fast and accurate Illumina Paired-End reAd mergeR

(2013) J. Zhang et al.   BIOINFORMATICS

BayesHammer: Bayesian clustering for error correction in single-cell sequencing

(2013) Sergey I Nikolenko et al.   BMC GENOMICS

Predicting community and ecosystem outcomes of mycorrhizal responses to global change

(2013) Nancy C. Johnson et al.   ECOLOGY LETTERS

A decade of free-air CO2enrichment increased the carbon throughput in a grass-clover ecosystem but did not drastically change carbon allocation patterns

(2013) Philip L. Staddon et al.   FUNCTIONAL ECOLOGY

Altered root traits due to elevated CO2: a meta-analysis

(2013) Ming Nie et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products

(2013) Sergey Nurk et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Global sampling of plant roots expands the described molecular diversity of arbuscular mycorrhizal fungi

(2013) Maarja Öpik et al.   MYCORRHIZA

Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data

(2012) M. Kearse et al.   BIOINFORMATICS

PANDAseq: paired-end assembler for illumina sequences

(2012) Andre P Masella et al.   BMC BIOINFORMATICS

Impacts of 3 years of elevated atmospheric CO2on rhizosphere carbon flow and microbial community dynamics

(2012) Barbara Drigo et al.   GLOBAL CHANGE BIOLOGY

Community assembly, species richness and nestedness of arbuscular mycorrhizal fungi in agricultural soils

(2012) ERIK VERBRUGGEN et al.   MOLECULAR ECOLOGY

Communities of Arbuscular Mycorrhizal Fungi Detected in Forest Soil Are Spatially Heterogeneous but Do Not Vary throughout the Growing Season

(2012) John Davison et al.   PLoS One

Carbon availability triggers fungal nitrogen uptake and transport in arbuscular mycorrhizal symbiosis

(2012) C. R. Fellbaum et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arbuscular Mycorrhizal Fungi Increase Organic Carbon Decomposition Under Elevated CO2

(2012) L. Cheng et al.   SCIENCE

mvabund- anRpackage for model-based analysis of multivariate abundance data

(2012) Yi Wang et al.   Methods in Ecology and Evolution

Local Adaptation to Soil Hypoxia Determines the Structure of an Arbuscular Mycorrhizal Fungal Community in Roots from Natural CO2Springs

(2011) Irena Maček et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Can differences in microbial abundances help explain enhanced N2O emissions in a permanent grassland under elevated atmospheric CO2?

(2011) Kathleen Regan et al.   GLOBAL CHANGE BIOLOGY

454-sequencing reveals stochastic local reassembly and high disturbance tolerance within arbuscular mycorrhizal fungal communities

(2011) Ylva Lekberg et al.   JOURNAL OF ECOLOGY

Distinct seasonal assemblages of arbuscular mycorrhizal fungi revealed by massively parallel pyrosequencing

(2011) Alex J. Dumbrell et al.   NEW PHYTOLOGIST

A meta-analysis of responses of soil biota to global change

(2011) Joseph C. Blankinship et al.   OECOLOGIA

The arcsine is asinine: the analysis of proportions in ecology

(2010) David I. Warton et al.   ECOLOGY

The online database MaarjAM reveals global and ecosystemic distribution patterns in arbuscular mycorrhizal fungi (Glomeromycota)

(2010) M. Öpik et al.   NEW PHYTOLOGIST

Shifting carbon flow from roots into associated microbial communities in response to elevated atmospheric CO2

(2010) B. Drigo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Relative roles of niche and neutral processes in structuring a soil microbial community

(2009) Alex J Dumbrell et al.   ISME Journal

Idiosyncrasy and overdominance in the structure of natural communities of arbuscular mycorrhizal fungi: is there a role for stochastic processes?

(2009) Alex J. Dumbrell et al.   JOURNAL OF ECOLOGY

Phylogenetic trait conservatism and the evolution of functional trade-offs in arbuscular mycorrhizal fungi

(2009) J. R. Powell et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Effect of elevated CO2 on soil N dynamics in a temperate grassland soil

(2009) Christoph Müller et al.   SOIL BIOLOGY & BIOCHEMISTRY

Elevated CO2 stimulates N2O emissions in permanent grassland

(2008) Claudia Kammann et al.   SOIL BIOLOGY & BIOCHEMISTRY