Functional diversity of microbial communities in two contrasting maize rhizosphere soils

A review on the plant microbiome: Ecology, functions, and emerging trends in microbial application

(2019) Stéphane Compant et al.   Journal of Advanced Research

Rhizosphere microbiome: revisiting the synergy of plant-microbe interactions

(2019) Saritha Mohanram et al.   ANNALS OF MICROBIOLOGY

Profiling the Functional Diversity of Termite Mound Soil Bacteria as Revealed by Shotgun Sequencing

(2019) Ben Jesuorsemwen Enagbonma et al.   Genes

Rhizosphere Bacterial Community Characteristics over Different Years of Sugarcane Ratooning in Consecutive Monoculture

(2019) Xiaoning Gao et al.   Biomed Research International

Rhizosphere Metagenomics of Paspalum scrobiculatum L. (Kodo Millet) Reveals Rhizobiome Multifunctionalities

(2019) Ratna Prabha et al.   Microorganisms

The influence of plant growth-promoting rhizobacteria in plant tolerance to abiotic stress: a survival strategy

(2018) Matthew Chekwube Enebe et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

CONTINUOUS-CROPPING TOBACCO CAUSED VARIANCE OF CHEMICAL PROPERTIES AND STRUCTURE OF BACTERIAL NETWORK IN SOILS

(2018) Shu Chen et al.   LAND DEGRADATION & DEVELOPMENT

Sulfate-Reducing Bacteria as an Effective Tool for Sustainable Acid Mine Bioremediation

(2018) Ayansina S. Ayangbenro et al.   Frontiers in Microbiology

Metal(loid) Bioremediation: Strategies Employed by Microbial Polymers

(2018) Ayansina Ayangbenro et al.   Sustainability

Plant health: feedback effect of root exudates-rhizobiome interactions

(2018) Oluwaseyi Samuel Olanrewaju et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

The structure and function of the global citrus rhizosphere microbiome

(2018) Jin Xu et al.   Nature Communications

Natural product discovery from the human microbiome

(2017) Matthew R. Wilson et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Current Insights into the Role of Rhizosphere Bacteria in Disease Suppressive Soils

(2017) Ruth Gómez Expósito et al.   Frontiers in Microbiology

Metagenomic analysis exploring taxonomic and functional diversity of soil microbial communities in Chilean vineyards and surrounding native forests

(2017) Luis E. Castañeda et al.   PeerJ

Taxonomic structure and functional association of foxtail millet root microbiome

(2017) Tao Jin et al.   GigaScience

Huanglongbing impairs the rhizosphere-to-rhizoplane enrichment process of the citrus root-associated microbiome

(2017) Yunzeng Zhang et al.   Microbiome

shinyheatmap: Ultra fast low memory heatmap web interface for big data genomics

(2017) Bohdan B. Khomtchouk et al.   PLoS One

Analysis of the microbiome: Advantages of whole genome shotgun versus 16S amplicon sequencing

(2016) Ravi Ranjan et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Metagenome-scale analysis yields insights into the structure and function of microbial communities in a copper bioleaching heap

(2016) Xian Zhang et al.   BMC GENETICS

Functional diversity of soil microbial communities in boreal and temperate Scots pine forests

(2016) Beata Klimek et al.   EUROPEAN JOURNAL OF FOREST RESEARCH

Natural Products as Sources of New Drugs from 1981 to 2014

(2016) David J. Newman et al.   JOURNAL OF NATURAL PRODUCTS

Assessment of Bacterial Communities and Predictive Functional Profiling in Soils Subjected to Short-Term Fumigation-Incubation

(2016) Lin Chen et al.   MICROBIAL ECOLOGY

Impact of long-term intensive cropping under continuous tillage and unbalanced use of fertilizers on soil nutrient contents in a small holding village

(2015) M El Fouly Mohamed et al.   African Journal of Agricultural Research

Engineering of Secondary Metabolism

(2015) Sarah E. O'Connor   Annual Review of Genetics

Whole-genome sequencing reveals novel insights into sulfur oxidation in the extremophile Acidithiobacillus thiooxidans

(2014) Huaqun Yin et al.   BMC MICROBIOLOGY

Taxonomical and functional microbial community selection in soybean rhizosphere

(2014) Lucas W Mendes et al.   ISME Journal

Functional Soil Microbiome: Belowground Solutions to an Aboveground Problem

(2014) V. Lakshmanan et al.   PLANT PHYSIOLOGY

Systems biology and biotechnology of Streptomyces species for the production of secondary metabolites

(2013) Kyu-Sang Hwang et al.   BIOTECHNOLOGY ADVANCES

Diversity and heritability of the maize rhizosphere microbiome under field conditions

(2013) J. A. Peiffer et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The M5nr: a novel non-redundant database containing protein sequences and annotations from multiple sources and associated tools

(2012) Andreas Wilke et al.   BMC BIOINFORMATICS

Beyond biogeographic patterns: processes shaping the microbial landscape

(2012) China A. Hanson et al.   NATURE REVIEWS MICROBIOLOGY

Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla

(2012) K. C. Wrighton et al.   SCIENCE

Metagenomic insights into chlorination effects on microbial antibiotic resistance in drinking water

(2012) Peng Shi et al.   WATER RESEARCH

Protection of Arabidopsis thaliana against Leaf-Pathogenic Pseudomonas syringae by Sphingomonas Strains in a Controlled Model System

(2011) Gerd Innerebner et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Metagenomic exploration of antibiotic resistance in soil

(2011) Jean-Michel Monier et al.   CURRENT OPINION IN MICROBIOLOGY

Differences in Soil Properties and Bacterial Communities between the Rhizosphere and Bulk Soil and among Different Production Areas of the Medicinal Plant Fritillaria thunbergii

(2011) Ji-Yan Shi et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Huanglongbing alters the structure and functional diversity of microbial communities associated with citrus rhizosphere

(2011) Pankaj Trivedi et al.   ISME Journal

Pyrosequencing of Antibiotic-Contaminated River Sediments Reveals High Levels of Resistance and Gene Transfer Elements

(2011) Erik Kristiansson et al.   PLoS One

Land-use history has a stronger impact on soil microbial community composition than aboveground vegetation and soil properties

(2011) Kamlesh Jangid et al.   SOIL BIOLOGY & BIOCHEMISTRY

The Abundance of Microbial Functional Genes in Grassy Woodlands Is Influenced More by Soil Nutrient Enrichment than by Recent Weed Invasion or Livestock Exclusion

(2010) E. A. Lindsay et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Changes in Fractions of Iron, Manganese, Copper, and Zinc in Soil under Continuous Cropping for More Than Three Decades

(2009) Sanjib Kumar Behera et al.   COMMUNICATIONS IN SOIL SCIENCE AND PLANT ANALYSIS

Auxin production by plant associated bacteria: impact on endogenous IAA content and growth ofTriticum aestivumL.

(2009) B. Ali et al.   LETTERS IN APPLIED MICROBIOLOGY

Regulation and function of root exudates

(2009) DAYAKAR V. BADRI et al.   PLANT CELL AND ENVIRONMENT

Quantifying environmental adaptation of metabolic pathways in metagenomics

(2009) T. A. Gianoulis et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Genetic Architecture of Maize Flowering Time

(2009) E. S. Buckler et al.   SCIENCE

A First-Generation Haplotype Map of Maize

(2009) M. A. Gore et al.   SCIENCE

The metagenomics RAST server – a public resource for the automatic phylogenetic and functional analysis of metagenomes

(2008) F Meyer et al.   BMC BIOINFORMATICS

Soil Bacteria Confer Plant Salt Tolerance by Tissue-Specific Regulation of the Sodium TransporterHKT1

(2008) Huiming Zhang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Functional metagenomic profiling of nine biomes

(2008) Elizabeth A. Dinsdale et al.   NATURE

Bacterial RNA Chaperones Confer Abiotic Stress Tolerance in Plants and Improved Grain Yield in Maize under Water-Limited Conditions

(2008) P. Castiglioni et al.   PLANT PHYSIOLOGY