Specification and epigenomic resetting of the pig germline exhibit conservation with the human lineage
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Title
Specification and epigenomic resetting of the pig germline exhibit conservation with the human lineage
Authors
Keywords
germ cells, DNA demethylation, pig, escapees, X-chromosome reactivation, single-cell RNA-seq, epigenetic resetting, transgenerational inheritance
Journal
Cell Reports
Volume 34, Issue 6, Pages 108735
Publisher
Elsevier BV
Online
2021-02-10
DOI
10.1016/j.celrep.2021.108735
References
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Note: Only part of the references are listed.- An Extended Culture System that Supports Human Primordial Germ Cell-like Cell Survival and Initiation of DNA Methylation Erasure
- (2020) Joanna J. Gell et al. Stem Cell Reports
- A critical role of PRDM14 in human primordial germ cell fate revealed by inducible degrons
- (2020) Anastasiya Sybirna et al. Nature Communications
- Pluripotency and X chromosome dynamics revealed in pig pre-gastrulating embryos by single cell analysis
- (2019) Priscila Ramos-Ibeas et al. Nature Communications
- Distinct mesoderm migration phenotypes in extra-embryonic and embryonic regions of the early mouse embryo
- (2019) Bechara Saykali et al. eLife
- Comprehensive Integration of Single-Cell Data
- (2019) Tim Stuart et al. CELL
- DNA cross-link repair safeguards genomic stability during premeiotic germ cell development
- (2019) Ross J. Hill et al. NATURE GENETICS
- Maternal vitamin C regulates reprogramming of DNA methylation and germline development
- (2019) Stephanie P. DiTroia et al. NATURE
- A developmental landscape of 3D-cultured human pre-gastrulation embryos
- (2019) Lifeng Xiang et al. NATURE
- Segregation of mitochondrial DNA heteroplasmy through a developmental genetic bottleneck in human embryos
- (2018) Vasileios I. Floros et al. NATURE CELL BIOLOGY
- Parental haplotype-specific single-cell transcriptomics reveal incomplete epigenetic reprogramming in human female germ cells
- (2018) Ábel Vértesy et al. Nature Communications
- The orphan GPR50 receptor promotes constitutive TGFβ receptor signaling and protects against cancer development
- (2018) Stefanie Wojciech et al. Nature Communications
- On the origin of the human germline
- (2018) Toshihiro Kobayashi et al. DEVELOPMENT
- Metabolic regulation of pluripotency and germ cell fate through α‐ketoglutarate
- (2018) Julia Tischler et al. EMBO JOURNAL
- Epigenetic reprogramming enables the transition from primordial germ cell to gonocyte
- (2018) Peter W. S. Hill et al. NATURE
- Non-redundant functions of EMT transcription factors
- (2018) Marc P. Stemmler et al. NATURE CELL BIOLOGY
- Principles of early human development and germ cell program from conserved model systems
- (2017) Toshihiro Kobayashi et al. NATURE
- Reversed graph embedding resolves complex single-cell trajectories
- (2017) Xiaojie Qiu et al. NATURE METHODS
- Genome-wide base-resolution mapping of DNA methylation in single cells using single-cell bisulfite sequencing (scBS-seq)
- (2017) Stephen J Clark et al. Nature Protocols
- MacroH2A1.1 regulates mitochondrial respiration by limiting nuclear NAD+ consumption
- (2017) Melanija Posavec Marjanović et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Distinct requirements for energy metabolism in mouse primordial germ cells and their reprogramming to embryonic germ cells
- (2017) Yohei Hayashi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Contribution of epigenetic landscapes and transcription factors to X-chromosome reactivation in the inner cell mass
- (2017) Maud Borensztein et al. Nature Communications
- MacroH2A1.1 regulates mitochondrial respiration by limiting nuclear NAD+ consumption
- (2017) Melanija Posavec Marjanović et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Gametogenesis from Pluripotent Stem Cells
- (2016) Mitinori Saitou et al. Cell Stem Cell
- The Germ Cell Fate of Cynomolgus Monkeys Is Specified in the Nascent Amnion
- (2016) Kotaro Sasaki et al. DEVELOPMENTAL CELL
- Site-specific Disruption of the Oct4/Sox2 Protein Interaction Reveals Coordinated Mesendodermal Differentiation and the Epithelial-Mesenchymal Transition
- (2016) Xiao Pan et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Specification and epigenetic programming of the human germ line
- (2016) Walfred W. C. Tang et al. NATURE REVIEWS GENETICS
- The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ Cells
- (2015) Fan Guo et al. CELL
- DNA Demethylation Dynamics in the Human Prenatal Germline
- (2015) Sofia Gkountela et al. CELL
- A Unique Gene Regulatory Network Resets the Human Germline Epigenome for Development
- (2015) Walfred W.C. Tang et al. CELL
- SOX17 Is a Critical Specifier of Human Primordial Germ Cell Fate
- (2015) Naoko Irie et al. CELL
- Primordial germ cells: the first cell lineage or the last cells standing?
- (2015) A. D. Johnson et al. DEVELOPMENT
- Conserved and divergent expression patterns of markers of axial development in eutherian mammals
- (2015) Michio Yoshida et al. DEVELOPMENTAL DYNAMICS
- HISAT: a fast spliced aligner with low memory requirements
- (2015) Daehwan Kim et al. NATURE METHODS
- A Mass Spectrometric-Derived Cell Surface Protein Atlas
- (2015) Damaris Bausch-Fluck et al. PLoS One
- Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads
- (2014) Hongshan Jiang et al. BMC BIOINFORMATICS
- Partial inhibition of Cdk1 in G2phase overrides the SAC and decouples mitotic events
- (2014) Rachael A McCloy et al. CELL CYCLE
- Paracrine effects of embryo-derived FGF4 and BMP4 during pig trophoblast elongation
- (2014) Griselda Valdez Magaña et al. DEVELOPMENTAL BIOLOGY
- Setdb1is required for germline development and silencing of H3K9me3-marked endogenous retroviruses in primordial germ cells
- (2014) Sheng Liu et al. GENES & DEVELOPMENT
- Bayesian approach to single-cell differential expression analysis
- (2014) Peter V Kharchenko et al. NATURE METHODS
- Full-length RNA-seq from single cells using Smart-seq2
- (2014) Simone Picelli et al. Nature Protocols
- featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
- (2013) Y. Liao et al. BIOINFORMATICS
- Dynamic Readers for 5-(Hydroxy)Methylcytosine and Its Oxidized Derivatives
- (2013) Cornelia G. Spruijt et al. CELL
- A replication-dependent passive mechanism modulates DNA demethylation in mouse primordial germ cells
- (2013) R. Ohno et al. DEVELOPMENT
- High-resolution DNA methylome analysis of primordial germ cells identifies gender-specific reprogramming in mice
- (2013) H. Kobayashi et al. GENOME RESEARCH
- A Reference Methylome Database and Analysis Pipeline to Facilitate Integrative and Comparative Epigenomics
- (2013) Qiang Song et al. PLoS One
- MacroH2A histone variants act as a barrier upon reprogramming towards pluripotency
- (2013) Alexandre Gaspar-Maia et al. Nature Communications
- Replication-coupled passive DNA demethylation for the erasure of genome imprints in mice
- (2012) Saya Kagiwada et al. EMBO JOURNAL
- A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff
- (2012) Pablo Cingolani et al. FLY
- Global profiling of DNA methylation erasure in mouse primordial germ cells
- (2012) S. Guibert et al. GENOME RESEARCH
- The Dynamics of Genome-wide DNA Methylation Reprogramming in Mouse Primordial Germ Cells
- (2012) Stefanie Seisenberger et al. MOLECULAR CELL
- The H3K27 demethylase Utx regulates somatic and germ cell epigenetic reprogramming
- (2012) Abed AlFatah Mansour et al. NATURE
- Analyses of pig genomes provide insight into porcine demography and evolution
- (2012) Martien A. M. Groenen et al. NATURE
- The ontogeny of cKIT+ human primordial germ cells proves to be a resource for human germ line reprogramming, imprint erasure and in vitro differentiation
- (2012) Sofia Gkountela et al. NATURE CELL BIOLOGY
- Fiji: an open-source platform for biological-image analysis
- (2012) Johannes Schindelin et al. NATURE METHODS
- Phf19 links methylated Lys36 of histone H3 to regulation of Polycomb activity
- (2012) Cecilia Ballaré et al. NATURE STRUCTURAL & MOLECULAR BIOLOGY
- Germline DNA Demethylation Dynamics and Imprint Erasure Through 5-Hydroxymethylcytosine
- (2012) J. A. Hackett et al. SCIENCE
- The sequence and analysis of a Chinese pig genome
- (2012) Xiaodong Fang et al. GigaScience
- Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications
- (2011) Felix Krueger et al. BIOINFORMATICS
- Changes of DNA Methylation Level and Spatial Arrangement of Primordial Germ Cells in Embryonic Day 15 to Embryonic Day 28 Pig Embryos1
- (2011) Sara Maj Watjen Hyldig et al. BIOLOGY OF REPRODUCTION
- Epigenetic reprogramming in the porcine germ line
- (2011) Sara MW Hyldig et al. BMC DEVELOPMENTAL BIOLOGY
- Reconstitution of the Mouse Germ Cell Specification Pathway in Culture by Pluripotent Stem Cells
- (2011) Katsuhiko Hayashi et al. CELL
- The Sda/GM2-glycan is a carbohydrate marker of porcine primordial germ cells and of a subpopulation of spermatogonia in cattle, pigs, horses and llama
- (2011) K Klisch et al. REPRODUCTION
- Stepwise differentiation of human embryonic stem cells into early endoderm derivatives and their molecular characterization
- (2011) Oded Kopper et al. Stem Cell Research
- Three-dimensional localisation of NANOG, OCT4, and E-cadherin in porcine pre- and peri-implantation embryos
- (2010) Xenia Asbaek Wolf et al. DEVELOPMENTAL DYNAMICS
- Genome-Wide Reprogramming in the Mouse Germ Line Entails the Base Excision Repair Pathway
- (2010) P. Hajkova et al. SCIENCE
- A Signaling Principle for the Specification of the Germ Cell Lineage in Mice
- (2009) Yasuhide Ohinata et al. CELL
- Complex genome-wide transcription dynamics orchestrated by Blimp1 for the specification of the germ cell lineage in mice
- (2008) K. Kurimoto et al. GENES & DEVELOPMENT
- Xist RNA Is Confined to the Nuclear Territory of the Silenced X Chromosome throughout the Cell Cycle
- (2008) I. Jonkers et al. MOLECULAR AND CELLULAR BIOLOGY
- Methylation changes in porcine primordial germ cells
- (2008) Stoyan G. Petkov et al. MOLECULAR REPRODUCTION AND DEVELOPMENT
- X Chromosome Activity in Mouse XX Primordial Germ Cells
- (2008) Susana M. Chuva de Sousa Lopes et al. PLoS Genetics
- Sex identification of pigs using polymerase chain reaction amplification of the amelogenin gene
- (2008) Shoichiro Sembon et al. ZYGOTE
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