Spatial patterns in phage-Rhizobium coevolutionary interactions across regions of common bean domestication
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Title
Spatial patterns in phage-Rhizobium coevolutionary interactions across regions of common bean domestication
Authors
Keywords
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Journal
ISME Journal
Volume -, Issue -, Pages -
Publisher
Springer Science and Business Media LLC
Online
2021-02-09
DOI
10.1038/s41396-021-00907-z
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Note: Only part of the references are listed.- The Environment and Cyanophage Diversity: Insights From Environmental Sequencing of DNA Polymerase
- (2019) Jan F. Finke et al. Frontiers in Microbiology
- Interaction strength promotes robustness against cascading effects in mutualistic networks
- (2019) Marília P. Gaiarsa et al. Scientific Reports
- Global-level population genomics reveals differential effects of geography and phylogeny on horizontal gene transfer in soil bacteria
- (2019) Alex Greenlon et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Global phylogeography and ancient evolution of the widespread human gut virus crAssphage
- (2019) Robert A. Edwards et al. Nature Microbiology
- Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria
- (2019) Alexander B. Chase et al. mBio
- Multifaceted Impacts of Bacteriophages in the Plant Microbiome
- (2018) Britt Koskella et al. Annual Review of Phytopathology
- Analysing ecological networks of species interactions
- (2018) Eva Delmas et al. BIOLOGICAL REVIEWS
- Multiple mechanisms drive phage infection efficiency in nearly identical hosts
- (2018) Cristina Howard-Varona et al. ISME Journal
- A major lineage of non-tailed dsDNA viruses as unrecognized killers of marine bacteria
- (2018) Kathryn M. Kauffman et al. NATURE
- Seeing the forest for the trees: Putting multilayer networks to work for community ecology
- (2018) Matthew C. Hutchinson et al. FUNCTIONAL ECOLOGY
- ΦCrAss001 represents the most abundant bacteriophage family in the human gut and infects Bacteroides intestinalis
- (2018) Andrey N. Shkoporov et al. Nature Communications
- Namib Desert Soil Microbial Community Diversity, Assembly, and Function Along a Natural Xeric Gradient
- (2017) Vincent Scola et al. MICROBIAL ECOLOGY
- Evidence for microbial local adaptation in nature
- (2017) Susanne A. Kraemer et al. MOLECULAR ECOLOGY
- Network structure and local adaptation in co-evolving bacteria-phage interactions
- (2017) James Gurney et al. MOLECULAR ECOLOGY
- Indirect effects drive coevolution in mutualistic networks
- (2017) Paulo R. Guimarães et al. NATURE
- Genomic features of bacterial adaptation to plants
- (2017) Asaf Levy et al. NATURE GENETICS
- Bacteriophage Distributions and Temporal Variability in the Ocean’s Interior
- (2017) Elaine Luo et al. mBio
- Molecular dynamics simulations reveal ligand-controlled positioning of a peripheral protein complex in membranes
- (2017) Steven M. Ryckbosch et al. Nature Communications
- Genomics and taxonomy in diagnostics for food security: soft-rotting enterobacterial plant pathogens
- (2016) Leighton Pritchard et al. Analytical Methods
- Resource-dependent antagonistic coevolution leads to a new paradox of enrichment
- (2016) Quan-Guo Zhang et al. ECOLOGY
- Migration highways and migration barriers created by host-parasite interactions
- (2016) Quan-Guo Zhang et al. ECOLOGY LETTERS
- Large-scale maps of variable infection efficiencies in aquatic Bacteroidetes phage-host model systems
- (2016) Karin Holmfeldt et al. ENVIRONMENTAL MICROBIOLOGY
- Population genomics of the symbiotic plasmids of sympatric nitrogen-fixing Rhizobium species associated with Phaseolus vulgaris
- (2016) Olga M. Pérez Carrascal et al. ENVIRONMENTAL MICROBIOLOGY
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- (2016) Stephanie S Porter et al. ISME Journal
- Local adaptation at higher trophic levels: contrasting hyperparasite-pathogen infection dynamics in the field and laboratory
- (2016) Steven R. Parratt et al. MOLECULAR ECOLOGY
- Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
- (2016) Simon Roux et al. NATURE
- Uncovering Earth’s virome
- (2016) David Paez-Espino et al. NATURE
- Selection mosaics differentiateRhizobium-host plant interactions across different nitrogen environments
- (2016) Jannick Van Cauwenberghe et al. OIKOS
- Symbiont abundance is more important than pre-infection partner choice in a Rhizobium – legume mutualism
- (2016) Jannick Van Cauwenberghe et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- Local adaptation of a bacterium is as important as its presence in structuring a natural microbial community
- (2016) Pedro Gómez et al. Nature Communications
- Biogeographic Variation in Host Range Phenotypes and Taxonomic Composition of Marine Cyanophage Isolates
- (2016) China A. Hanson et al. Frontiers in Microbiology
- BPGA- an ultra-fast pan-genome analysis pipeline
- (2016) Narendrakumar M. Chaudhari et al. Scientific Reports
- Diversity patterns of R hizobiaceae communities inhabiting soils, root surfaces and nodules reveal a strong selection of rhizobial partners by legumes
- (2015) Fabiola Miranda-Sánchez et al. ENVIRONMENTAL MICROBIOLOGY
- Dark Matter of the Biosphere: the Amazing World of Bacteriophage Diversity
- (2015) Graham F. Hatfull JOURNAL OF VIROLOGY
- Endemic Mimosa species from Mexico prefer alphaproteobacterial rhizobial symbionts
- (2015) Cyril Bontemps et al. NEW PHYTOLOGIST
- The evolution of bacterial resistance against bacteriophages in the horse chestnut phyllosphere is general across both space and time
- (2015) Britt Koskella et al. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES
- Patterns and ecological drivers of ocean viral communities
- (2015) J. R. Brum et al. SCIENCE
- Effects of local environmental variables and geographical location on the genetic diversity and composition of Rhizobium leguminosarum nodulating Vicia cracca populations
- (2015) Jannick Van Cauwenberghe et al. SOIL BIOLOGY & BIOCHEMISTRY
- BiMat: aMATLABpackage to facilitate the analysis of bipartite networks
- (2015) Cesar O. Flores et al. Methods in Ecology and Evolution
- Biogeography of Viruses in the Sea
- (2015) Cheryl-Emiliane T. Chow et al. Annual Review of Virology
- What Ecologists Can Tell Virologists
- (2014) John J. Dennehy Annual Review of Microbiology
- Marine Cyanophages Demonstrate Biogeographic Patterns throughout the Global Ocean
- (2014) Sijun Huang et al. APPLIED AND ENVIRONMENTAL MICROBIOLOGY
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- Automated classification of tailed bacteriophages according to their neck organization
- (2014) Anne Lopes et al. BMC GENOMICS
- Depth-stratified functional and taxonomic niche specialization in the ‘core’ and ‘flexible’ Pacific Ocean Virome
- (2014) Bonnie L Hurwitz et al. ISME Journal
- Isolation by environment
- (2014) Ian J. Wang et al. MOLECULAR ECOLOGY
- Population structure of root nodulating Rhizobium leguminosarum in Vicia cracca populations at local to regional geographic scales
- (2014) Jannick Van Cauwenberghe et al. SYSTEMATIC AND APPLIED MICROBIOLOGY
- A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomes
- (2014) Bas E. Dutilh et al. Nature Communications
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- Consed: a graphical editor for next-generation sequencing
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- The geographical patterns of symbiont diversity in the invasive legumeMimosa pudicacan be explained by the competitiveness of its symbionts and by the host genotype
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- (2012) Elena Bitocchi et al. NEW PHYTOLOGIST
- Primer3—new capabilities and interfaces
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- Herbivores alter the fitness benefits of a plant–rhizobium mutualism
- (2011) Katy D. Heath et al. ACTA OECOLOGICA-INTERNATIONAL JOURNAL OF ECOLOGY
- Local Biotic Environment Shapes the Spatial Scale of Bacteriophage Adaptation to Bacteria
- (2011) Britt Koskella et al. AMERICAN NATURALIST
- The diversity of cyanomyovirus populations along a North–South Atlantic Ocean transect
- (2011) Eleanor Jameson et al. ISME Journal
- Abiotic heterogeneity drives parasite local adaptation in coevolving bacteria and phages
- (2011) L. LOPEZ PASCUA et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- Statistical structure of host-phage interactions
- (2011) C. O. Flores et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Rhizobial Adaptation to Hosts, a New Facet in the Legume Root-Nodule Symbiosis
- (2010) Marion Koch et al. MOLECULAR PLANT-MICROBE INTERACTIONS
- Bacteriophage resistance mechanisms
- (2010) Simon J. Labrie et al. NATURE REVIEWS MICROBIOLOGY
- Current insights into phage biodiversity and biogeography
- (2009) Rebecca Vega Thurber CURRENT OPINION IN MICROBIOLOGY
- Viral biogeography revealed by signatures inSulfolobus islandicusgenomes
- (2009) Nicole L. Held et al. ENVIRONMENTAL MICROBIOLOGY
- Shifting the genomic gold standard for the prokaryotic species definition
- (2009) Michael Richter et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Local Adaptation of Bacteriophages to Their Bacterial Hosts in Soil
- (2009) M. Vos et al. SCIENCE
- HETEROGENEOUS GENOMIC DIFFERENTIATION BETWEEN WALKING-STICK ECOTYPES: "ISOLATION BY ADAPTATION" AND MULTIPLE ROLES FOR DIVERGENT SELECTION
- (2008) Patrik Nosil et al. EVOLUTION
- Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
- (2008) D. R. Zerbino et al. GENOME RESEARCH
- Increasing productivity accelerates host–parasite coevolution
- (2008) L. d. C. LOPEZ-PASCUA et al. JOURNAL OF EVOLUTIONARY BIOLOGY
- A bacterial metapopulation adapts locally to phage predation despite global dispersal
- (2007) V. Kunin et al. GENOME RESEARCH
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