Transcriptome Profiling of Staphylococcus aureus Associated Extracellular Vesicles Reveals Presence of Small RNA-Cargo

Bacterial RNA in extracellular vesicles: A new regulator of host-pathogen interactions?

(2020) Anne-Laure Lécrivain et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

RNA-Sequencing Analyses of Small Bacterial RNAs and their Emergence as Virulence Factors in Host-Pathogen Interactions

(2020) Idrissa Diallo et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Comparative Transcriptomic and Functional Assessments of Linezolid-Responsive Small RNA Genes in Staphylococcus aureus

(2020) Wei Gao et al.   mSystems

Sorting Mechanisms for MicroRNAs into Extracellular Vesicles and Their Associated Diseases

(2020) Michael Groot et al.   Cells

Extracellular Vesicles: A Potential Biomarker for Quick Identification of Infectious Osteomyelitis

(2020) Songyun Deng et al.   Frontiers in Cellular and Infection Microbiology

Analysis of colony phase variation switch in Acinetobacter baumannii clinical isolates

(2019) Irfan Ahmad et al.   PLoS One

Extracellular Vesicle-Mediated RNA Release in Histoplasma capsulatum

(2019) Lysangela R. Alves et al.   mSphere

Membrane Vesicles Are the Dominant Structural Components of Ceftazidime-Induced Biofilm Formation in an Oxacillin-Sensitive MRSA

(2019) Xinlong He et al.   Frontiers in Microbiology

The small non-coding RNA RsaE influences extracellular matrix composition in Staphylococcus epidermidis biofilm communities

(2019) Sonja M. K. Schoenfelder et al.   PLoS Pathogens

A computational system for identifying operons based on RNA-seq data

(2019) Brian Tjaden   METHODS

Small RNA Profiles of Serum Exosomes Derived From Individuals With Latent and Active Tuberculosis

(2019) Lingna Lyu et al.   Frontiers in Microbiology

RsaC sRNA modulates the oxidative stress response of Staphylococcus aureus during manganese starvation

(2019) David Lalaouna et al.   NUCLEIC ACIDS RESEARCH

Production of Membrane Vesicles by Enterococcus faecium Cultured With or Without Subinhibitory Concentrations of Antibiotics and Their Pathological Effects on Epithelial Cells

(2019) Mi Hyun Kim et al.   Frontiers in Cellular and Infection Microbiology

The secRNome of Listeria monocytogenes Harbors Small Noncoding RNAs That Are Potent Inducers of Beta Interferon

(2019) Renate Frantz et al.   mBio

Vesicles From Vibrio cholerae Contain AT-Rich DNA and Shorter mRNAs That Do Not Correlate With Their Protein Products

(2019) Petter Langlete et al.   Frontiers in Microbiology

Chromobacterium violaceum delivers violacein, a hydrophobic antibiotic, to other microbes in membrane vesicles

(2019) Seong Yeol Choi et al.   ENVIRONMENTAL MICROBIOLOGY

Bacterial Adaptation to Antibiotics through Regulatory RNAs

(2018) Brice Felden et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Detection of mycobacterial small RNA in the bacterial culture supernatant and plasma of patients with active tuberculosis

(2018) Yingmei Fu et al.   BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Outer Membrane Vesicles Facilitate Trafficking of the Hydrophobic Signaling Molecule CAI-1 between Vibrio harveyi Cells

(2018) Sophie Brameyer et al.   JOURNAL OF BACTERIOLOGY

Enterococcus faecium produces membrane vesicles containing virulence factors and antimicrobial resistance related proteins

(2018) T. Wagner et al.   Journal of Proteomics

Technical challenges of working with extracellular vesicles

(2018) Marcel I. Ramirez et al.   Nanoscale

Paracoccus denitrificans can utilize various long-chain N -acyl homoserine lactones and sequester them in membrane vesicles

(2018) Kana Morinaga et al.   Environmental Microbiology Reports

Release of Staphylococcus aureus extracellular vesicles and their application as a vaccine platform

(2018) Xiaogang Wang et al.   Nature Communications

Staphylococcus aureus Membrane-Derived Vesicles Promote Bacterial Virulence and Confer Protective Immunity in Murine Infection Models

(2018) Fatemeh Askarian et al.   Frontiers in Microbiology

Gram-Positive Bacterial Extracellular Vesicles and Their Impact on Health and Disease

(2018) Yue Liu et al.   Frontiers in Microbiology

Assessment of Bona Fide sRNAs in Staphylococcus aureus

(2018) Wenfeng Liu et al.   Frontiers in Microbiology

The RNA Complement of Outer Membrane Vesicles From Salmonella enterica Serovar Typhimurium Under Distinct Culture Conditions

(2018) Antoine Malabirade et al.   Frontiers in Microbiology

Antibiotics stimulate vesicles formation in Staphylococcus aureus in a phage-dependent and independent fashion and via different routes

(2018) Federica Andreoni et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Listeria monocytogenes virulence factors, including Listeriolysin O, are secreted in biologically active Extracellular Vesicles

(2018) Carolina Coelho et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

Comparative exoproteome profiling of an invasive and a commensal Staphylococcus haemolyticus isolate

(2018) Jorunn Pauline Cavanagh et al.   Journal of Proteomics

Types and origins of bacterial membrane vesicles

(2018) Masanori Toyofuku et al.   NATURE REVIEWS MICROBIOLOGY

The Mechanism behind Bacterial Lipoprotein Release: Phenol-Soluble Modulins Mediate Toll-Like Receptor 2 Activation via Extracellular Vesicle Release from Staphylococcus aureus

(2018) Katja Schlatterer et al.   mBio

Impact of preanalytical conditions on plasma concentration and size distribution of extracellular vesicles using Nanoparticle Tracking Analysis

(2018) Simin Jamaly et al.   Scientific Reports

Membrane vesicle secretion and prophage induction in multidrug-resistant Stenotrophomonas maltophilia in response to ciprofloxacin stress

(2017) Simon Devos et al.   ENVIRONMENTAL MICROBIOLOGY

Spheres of Hope, Packets of Doom: the Good and Bad of Outer Membrane Vesicles in Interspecies and Ecological Dynamics

(2017) Jonathan B. Lynch et al.   JOURNAL OF BACTERIOLOGY

Secretable Small RNAs via Outer Membrane Vesicles in Periodontal Pathogens

(2017) J.-W. Choi et al.   JOURNAL OF DENTAL RESEARCH

Vancomycin-induced biofilm formation by methicillin-resistant Staphylococcus aureus is associated with the secretion of membrane vesicles

(2017) Xinlong He et al.   MICROBIAL PATHOGENESIS

A Novel Role of Listeria monocytogenes Membrane Vesicles in Inhibition of Autophagy and Cell Death

(2017) Svitlana Vdovikova et al.   Frontiers in Cellular and Infection Microbiology

Comparative evaluation of rRNA depletion procedures for the improved analysis of bacterial biofilm and mixed pathogen culture transcriptomes

(2017) Olga E. Petrova et al.   Scientific Reports

Bacterial membrane vesicles transport their DNA cargo into host cells

(2017) Natalie J. Bitto et al.   Scientific Reports

Isolation and Characterization of a microRNA-size Secretable Small RNA in Streptococcus sanguinis

(2016) Ji-Woong Choi et al.   CELL BIOCHEMISTRY AND BIOPHYSICS

TheyjdFriboswitch candidate regulates gene expression by binding diverse azaaromatic compounds

(2016) Sanshu Li et al.   RNA

A Two-Component Regulatory System Impacts Extracellular Membrane-Derived Vesicle Production in Group A Streptococcus

(2016) Ulrike Resch et al.   mBio

Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions

(2016) Ulrike Mäder et al.   PLoS Genetics

A Novel Mechanism of Host-Pathogen Interaction through sRNA in Bacterial Outer Membrane Vesicles

(2016) Katja Koeppen et al.   PLoS Pathogens

Toxin-Antitoxin Systems of Staphylococcus aureus

(2016) Christopher Schuster et al.   Toxins

Uropathogenic Escherichia coli Releases Extracellular Vesicles That Are Associated with RNA

(2016) Cherie Blenkiron et al.   PLoS One

Small RNAs derived from tRNAs and rRNAs are highly enriched in exosomes from both old and new world Leishmania providing evidence for conserved exosomal RNA Packaging

(2015) Ulrike Lambertz et al.   BMC GENOMICS

Temperate bacteriophages collected by outer membrane vesicles inKomagataeibacter intermedius

(2015) Alla Kharina et al.   JOURNAL OF BASIC MICROBIOLOGY

Outer-membrane vesicles from Gram-negative bacteria: biogenesis and functions

(2015) Carmen Schwechheimer et al.   NATURE REVIEWS MICROBIOLOGY

Extracellular vesicle-mediated export of fungal RNA

(2015) Roberta Peres da Silva et al.   Scientific Reports

The effect of imipenem and diffusible signaling factors on the secretion of outer membrane vesicles and associated Ax21 proteins in Stenotrophomonas maltophilia

(2015) Simon Devos et al.   Frontiers in Microbiology

The extracellular RNA complement ofEscherichia coli

(2015) Anubrata Ghosal et al.   MicrobiologyOpen

Exosome and Exosomal MicroRNA: Trafficking, Sorting, and Function

(2015) Jian Zhang et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Membrane vesicle-mediated release of bacterial RNA

(2015) Annika E. Sjöström et al.   Scientific Reports

Role for Mycobacterium tuberculosis Membrane Vesicles in Iron Acquisition

(2014) R. Prados-Rosales et al.   JOURNAL OF BACTERIOLOGY

Influence of Iron and Aeration on Staphylococcus aureus Growth, Metabolism, and Transcription

(2014) N. Ledala et al.   JOURNAL OF BACTERIOLOGY

Characterization of the small RNA content of Trypanosoma cruzi extracellular vesicles

(2014) Ethel Bayer-Santos et al.   MOLECULAR AND BIOCHEMICAL PARASITOLOGY

Bacterial RNA:DNA hybrids are activators of the NLRP3 inflammasome

(2014) S. Kailasan Vanaja et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Bacterial Vesicles in the Ocean

(2014) D. Scanlan   SCIENCE

Preferential Packing of Acidic Glycosidases and Proteases into Bacteroides Outer Membrane Vesicles

(2014) W. Elhenawy et al.   mBio

High-Resolution Transcriptomic Analysis of the Adaptive Response of Staphylococcus aureus during Acute and Chronic Phases of Osteomyelitis

(2014) Anna K. Szafranska et al.   mBio

Exosomes secreted by nematode parasites transfer small RNAs to mammalian cells and modulate innate immunity

(2014) Amy H. Buck et al.   Nature Communications

Regulatory RNAs Involved in Bacterial Antibiotic Resistance

(2014) David Lalaouna et al.   PLoS Pathogens

A Non-Coding RNA Promotes Bacterial Persistence and Decreases Virulence by Regulating a Regulator in Staphylococcus aureus

(2014) Cédric Romilly et al.   PLoS Pathogens

Analysis of the Small RNA Transcriptional Response in Multidrug-Resistant Staphylococcus aureus after Antimicrobial Exposure

(2013) Benjamin P. Howden et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

The importance of regulatory RNAs in Staphylococcus aureus

(2013) Arnaud Tomasini et al.   INFECTION GENETICS AND EVOLUTION

DNA-bearing membrane vesicles produced byAhrensia kielensisandPseudoalteromonas marina

(2013) Sylvia Hagemann et al.   JOURNAL OF BASIC MICROBIOLOGY

Human TLR8 is activated upon recognition of Borrelia burgdorferi RNA in the phagosome of human monocytes

(2013) Jorge L. Cervantes et al.   JOURNAL OF LEUKOCYTE BIOLOGY

Functional Advantages Conferred by Extracellular Prokaryotic Membrane Vesicles

(2013) Andrew J. Manning et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Iron-responsive bacterial small RNAs: variations on a theme

(2013) Amanda G. Oglesby-Sherrouse et al.   Metallomics

Adhesion, invasion and evasion: the many functions of the surface proteins of Staphylococcus aureus

(2013) Timothy J. Foster et al.   NATURE REVIEWS MICROBIOLOGY

Extracellular vesicles shed by Trypanosoma cruzi are linked to small RNA pathways, life cycle regulation, and susceptibility to infection of mammalian cells

(2013) Maria R. Garcia-Silva et al.   PARASITOLOGY RESEARCH

Staphylococcus aureus α-Toxin-Dependent Induction of Host Cell Death by Membrane-Derived Vesicles

(2013) Bernard Thay et al.   PLoS One

Outer membrane vesicles reflect environmental cues in Gallibacterium anatis

(2013) Ragnhild J. Bager et al.   VETERINARY MICROBIOLOGY

RNA-Mediated Regulation in Pathogenic Bacteria

(2013) I. Caldelari et al.   Cold Spring Harbor Perspectives in Medicine

Methionine Biosynthesis in Staphylococcus aureus Is Tightly Controlled by a Hierarchical Network Involving an Initiator tRNA-Specific T-box Riboswitch

(2013) Sonja M. K. Schoenfelder et al.   PLoS Pathogens

Emerging Functions for the Staphylococcus aureus RNome

(2013) Julien Guillet et al.   PLoS Pathogens

Staphylococcus aureus-derived extracellular vesicles induce neutrophilic pulmonary inflammation via both Th1 and Th17 cell responses

(2012) M.-R. Kim et al.   ALLERGY

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Modulating Activity of Vancomycin and Daptomycin on the Expression of Autolysis Cell-Wall Turnover and Membrane Charge Genes in hVISA and VISA Strains

(2012) Viviana Cafiso et al.   PLoS One

Vesiculation fromPseudomonas aeruginosaunder SOS

(2012) Reshma Maredia et al.   TheScientificWorldJOURNAL

Low Levels of  -Lactam Antibiotics Induce Extracellular DNA Release and Biofilm Formation in Staphylococcus aureus

(2012) J. B. Kaplan et al.   mBio

Predicting sRNAs and Their Targets in Bacteria

(2012) Wuju Li et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Contribution of bacterial outer membrane vesicles to innate bacterial defense

(2011) Andrew J Manning et al.   BMC MICROBIOLOGY

Intercellular Nanotubes Mediate Bacterial Communication

(2011) Gyanendra P. Dubey et al.   CELL

Vancomycin promotes the bacterial autolysis, release of extracellular DNA, and biofilm formation in vancomycin-non-susceptible Staphylococcus aureus

(2011) Chi-Yu Hsu et al.   FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

Staphylococcus aureus Produces Membrane-Derived Vesicles That Induce Host Cell Death

(2011) Mamata Gurung et al.   PLoS One

Bacterial Nanotubes for Intimate Sharing

(2011) Mitesh Dongre et al.   Frontiers in Microbiology

Extracellular vesicles derived from Staphylococcus aureus induce atopic dermatitis-like skin inflammation

(2010) S.-W. Hong et al.   ALLERGY

The MicroRNA Spectrum in 12 Body Fluids

(2010) J. A. Weber et al.   CLINICAL CHEMISTRY

SsrA (tmRNA) acts as an antisense RNA to regulateStaphylococcus aureuspigment synthesis by base pairing withcrtMNmRNA

(2010) Yu Liu et al.   FEBS LETTERS

Bacillus anthracis produces membrane-derived vesicles containing biologically active toxins

(2010) J. Rivera et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A novel sRNA that modulates virulence and environmental fitness ofVibrio cholerae

(2010) Tianyan Song et al.   RNA Biology

Transcriptomic Response of Listeria monocytogenes to Iron Limitation and fur Mutation

(2009) N. Ledala et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Outer membrane vesicle-mediated release of cytolethal distending toxin (CDT) from Campylobacter jejuni

(2009) Barbro Lindmark et al.   BMC MICROBIOLOGY

An overview of RNAs with regulatory functions in gram-positive bacteria

(2009) Pascale Romby et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Lipophilic Dye Staining ofCryptococcus neoformansExtracellular Vesicles and Capsule

(2009) André Moraes Nicola et al.   EUKARYOTIC CELL

Quorum Sensing in Staphylococci

(2008) Richard P. Novick et al.   Annual Review of Genetics

A new Vibrio cholerae sRNA modulates colonization and affects release of outer membrane vesicles

(2008) Tianyan Song et al.   MOLECULAR MICROBIOLOGY

RNA-Seq: a revolutionary tool for transcriptomics

(2008) Zhong Wang et al.   NATURE REVIEWS GENETICS

Trans-Translation in Helicobacter pylori: Essentiality of Ribosome Rescue and Requirement of Protein Tagging for Stress Resistance and Competence

(2008) Marie Thibonnier et al.   PLoS One