The RNA Complement of Outer Membrane Vesicles From Salmonella enterica Serovar Typhimurium Under Distinct Culture Conditions

Small RNA profiling of low biomass samples: identification and removal of contaminants

(2018) Anna Heintz-Buschart et al.   BMC BIOLOGY

6S RNA is involved in acid resistance and invasion of epithelial cells in Salmonella enterica serovar Typhimurium

(2017) Jie Ren et al.   Future Microbiology

Spheres of Hope, Packets of Doom: the Good and Bad of Outer Membrane Vesicles in Interspecies and Ecological Dynamics

(2017) Jonathan B. Lynch et al.   JOURNAL OF BACTERIOLOGY

Secretable Small RNAs via Outer Membrane Vesicles in Periodontal Pathogens

(2017) J.-W. Choi et al.   JOURNAL OF DENTAL RESEARCH

The outer membrane vesicles: Secretion system type zero

(2017) Andrea Guerrero-Mandujano et al.   TRAFFIC

Interaction of Bacterial Membrane Vesicles with Specific Species and Their Potential for Delivery to Target Cells

(2017) Yosuke Tashiro et al.   Frontiers in Microbiology

Characterization of the Prophage Repertoire of African Salmonella Typhimurium ST313 Reveals High Levels of Spontaneous Induction of Novel Phage BTP1

(2017) Siân V. Owen et al.   Frontiers in Microbiology

Outer Membrane Vesicles (OMVs) of Gram-negative Bacteria: A Perspective Update

(2017) Arif Tasleem Jan   Frontiers in Microbiology

Sources and Functions of Extracellular Small RNAs in Human Circulation

(2016) Joëlle V. Fritz et al.   Annual Review of Nutrition

Environmentally controlled bacterial vesicle-mediated export

(2016) Nichole Orench-Rivera et al.   CELLULAR MICROBIOLOGY

Mechanisms of outer membrane vesicle entry into host cells

(2016) Eloise J. O'Donoghue et al.   CELLULAR MICROBIOLOGY

Deep sequencing approach for investigating infectious agents causing fever

(2016) T. N. Susilawati et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

How Our Other Genome Controls Our Epi-Genome

(2016) Antonella Celluzzi et al.   TRENDS IN MICROBIOLOGY

LPS Remodeling Triggers Formation of Outer Membrane Vesicles in Salmonella

(2016) Wael Elhenawy et al.   mBio

Outer Membrane Vesicle Production Facilitates LPS Remodeling and Outer Membrane Maintenance in Salmonella during Environmental Transitions

(2016) Katherine E. Bonnington et al.   mBio

The Impact of 18 Ancestral and Horizontally-Acquired Regulatory Proteins upon the Transcriptome and sRNA Landscape of Salmonella enterica serovar Typhimurium

(2016) Aoife M. Colgan et al.   PLoS Genetics

A Novel Mechanism of Host-Pathogen Interaction through sRNA in Bacterial Outer Membrane Vesicles

(2016) Katja Koeppen et al.   PLoS Pathogens

Uropathogenic Escherichia coli Releases Extracellular Vesicles That Are Associated with RNA

(2016) Cherie Blenkiron et al.   PLoS One

Outer-membrane vesicles from Gram-negative bacteria: biogenesis and functions

(2015) Carmen Schwechheimer et al.   NATURE REVIEWS MICROBIOLOGY

Salmonellae interactions with host processes

(2015) Doris L. LaRock et al.   NATURE REVIEWS MICROBIOLOGY

RNA-seq Brings New Insights to the Intra-Macrophage Transcriptome of Salmonella Typhimurium

(2015) Shabarinath Srikumar et al.   PLoS Pathogens

The extracellular RNA complement ofEscherichia coli

(2015) Anubrata Ghosal et al.   MicrobiologyOpen

Functional Advantages of Porphyromonas gingivalis Vesicles

(2015) Meng-Hsuan Ho et al.   PLoS One

Membrane vesicle-mediated release of bacterial RNA

(2015) Annika E. Sjöström et al.   Scientific Reports

Identification and Characterization of Outer Membrane Vesicle-Associated Proteins in Salmonella enterica Serovar Typhimurium

(2014) Jaewoo Bai et al.   INFECTION AND IMMUNITY

Type VI secretion system effectors: poisons with a purpose

(2014) Alistair B. Russell et al.   NATURE REVIEWS MICROBIOLOGY

Structural and Functional Characterization of DUF1471 Domains of Salmonella Proteins SrfN, YdgH/SssB, and YahO

(2014) Alexander Eletsky et al.   PLoS One

Human NLRP3 inflammasome senses multiple types of bacterial RNAs

(2014) Wenwen Sha et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

RNA localization in bacteria

(2014) Avi-ad Avraam Buskila et al.   RNA Biology

VgrG, Tae, Tle, and beyond: the versatile arsenal of Type VI secretion effectors

(2014) Eric Durand et al.   TRENDS IN MICROBIOLOGY

tmRNA-mediated trans-translation as the major ribosome rescue system in a bacterial cell

(2014) Hyouta Himeno et al.   Frontiers in Genetics

Envelope Control of Outer Membrane Vesicle Production in Gram-Negative Bacteria

(2013) Carmen Schwechheimer et al.   BIOCHEMISTRY

featureCounts: an efficient general purpose program for assigning sequence reads to genomic features

(2013) Y. Liao et al.   BIOINFORMATICS

An Infection-Relevant Transcriptomic Compendium for Salmonella enterica Serovar Typhimurium

(2013) Carsten Kröger et al.   Cell Host & Microbe

Salmonella enterica Serovar Typhimurium Skills To Succeed in the Host: Virulence and Regulation

(2013) A. Fabrega et al.   CLINICAL MICROBIOLOGY REVIEWS

Deciphering the Interplay between Two Independent Functions of the Small RNA Regulator SgrS in Salmonella

(2013) D. Balasubramanian et al.   JOURNAL OF BACTERIOLOGY

Functional Advantages Conferred by Extracellular Prokaryotic Membrane Vesicles

(2013) Andrew J. Manning et al.   JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY

Diverse Secreted Effectors Are Required for Salmonella Persistence in a Mouse Infection Model

(2013) Afshan S. Kidwai et al.   PLoS One

Fungal Small RNAs Suppress Plant Immunity by Hijacking Host RNA Interference Pathways

(2013) Arne Weiberg et al.   SCIENCE

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

(2013) Daehwan Kim et al.   GENOME BIOLOGY

RIG-I detects infection with liveListeriaby sensing secreted bacterial nucleic acids

(2012) Zeinab Abdullah et al.   EMBO JOURNAL

Type VI Secretion System-Associated Gene Clusters Contribute to Pathogenesis of Salmonella enterica Serovar Typhimurium

(2012) David T. Mulder et al.   INFECTION AND IMMUNITY

Production of Outer Membrane Vesicles and Outer Membrane Tubes by Francisella novicida

(2012) W. D. McCaig et al.   JOURNAL OF BACTERIOLOGY

Stable Extracellular RNA Fragments of Mycobacterium tuberculosis Induce Early Apoptosis in Human Monocytes via a Caspase-8 Dependent Mechanism

(2012) Andrés Obregón-Henao et al.   PLoS One

The ancestral SgrS RNA discriminates horizontally acquired Salmonella mRNAs through a single G-U wobble pair

(2012) K. Papenfort et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Dynamics ofSalmonellasmall RNA expression in non-growing bacteria located inside eukaryotic cells

(2012) Álvaro D. Ortega et al.   RNA Biology

sRNAs and the virulence ofSalmonella entericaserovar Typhimurium

(2012) Magali Hébrard et al.   RNA Biology

Secreted microRNAs: a new form of intercellular communication

(2012) Xi Chen et al.   TRENDS IN CELL BIOLOGY

Subcellular localization of RNA and proteins in prokaryotes

(2012) Keren Nevo-Dinur et al.   TRENDS IN GENETICS

GogB Is an Anti-Inflammatory Effector that Limits Tissue Damage during Salmonella Infection through Interaction with Human FBXO22 and Skp1

(2012) Ana Victoria C. Pilar et al.   PLoS Pathogens

Sequence specific detection of bacterial 23S ribosomal RNA by TLR13

(2012) Xiao-Dong Li et al.   eLife

Systems analysis of multiple regulator perturbations allows discovery of virulence factors in Salmonella

(2011) Hyunjin Yoon et al.   BMC Systems Biology

The challenge of relating gene expression to the virulence of Salmonella enterica serovar Typhimurium

(2011) Magali Hébrard et al.   CURRENT OPINION IN BIOTECHNOLOGY

Discovery of Salmonella Virulence Factors Translocated via Outer Membrane Vesicles to Murine Macrophages

(2011) Hyunjin Yoon et al.   INFECTION AND IMMUNITY

Pervasive post-transcriptional control of genes involved in amino acid metabolism by the Hfq-dependent GcvB small RNA

(2011) Cynthia M. Sharma et al.   MOLECULAR MICROBIOLOGY

Integrative genomics viewer

(2011) James T Robinson et al.   NATURE BIOTECHNOLOGY

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

(2011) Robert Kofler et al.   PLoS One

Translation-Independent Localization of mRNA in E. coli

(2011) K. Nevo-Dinur et al.   SCIENCE

A Salmonella Small Non-Coding RNA Facilitates Bacterial Invasion and Intracellular Replication by Modulating the Expression of Virulence Factors

(2011) Hao Gong et al.   PLoS Pathogens

Variation of Physiochemical Properties and Cell Association Activity of Membrane Vesicles with Growth Phase in Pseudomonas aeruginosa

(2010) Y. Tashiro et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Regulatory RNA in Bacterial Pathogens

(2010) Kai Papenfort et al.   Cell Host & Microbe

Post-transcriptional global regulation by CsrA in bacteria

(2010) Johan Timmermans et al.   CELLULAR AND MOLECULAR LIFE SCIENCES

Discovery of Novel Secreted Virulence Factors fromSalmonella entericaSerovar Typhimurium by Proteomic Analysis of Culture Supernatants

(2010) George S. Niemann et al.   INFECTION AND IMMUNITY

The tripartite capsid gene of Salmonella phage Gifsy-2 yields a capsid assembly pathway engaging features from HK97 and λ

(2010) Grégory Effantin et al.   VIROLOGY

Comparison and evaluation of RNA quantification methods using viral, prokaryotic, and eukaryotic RNA over a 104 concentration range

(2009) Roman Aranda et al.   ANALYTICAL BIOCHEMISTRY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Small noncoding RNA GcvB is a novel regulator of acid resistance in Escherichia coli

(2009) Ye Jin et al.   BMC GENOMICS

Bacterial RNA is recognized by different sets of immunoreceptors

(2009) Florian Eberle et al.   EUROPEAN JOURNAL OF IMMUNOLOGY

Induction of Salmonella pathogenicity island 1 under different growth conditions can affect Salmonella-host cell interactions in vitro

(2009) J. A. Ibarra et al.   MICROBIOLOGY-SGM

Coordinated Regulation of Virulence during Systemic Infection of Salmonella enterica Serovar Typhimurium

(2009) Hyunjin Yoon et al.   PLoS Pathogens

Simultaneous Inference in General Parametric Models

(2008) Torsten Hothorn et al.   BIOMETRICAL JOURNAL

During infection of epithelial cells Salmonella enterica serovar Typhimurium undergoes a time-dependent transcriptional adaptation that results in simultaneous expression of three type 3 secretion systems

(2008) I. Hautefort et al.   CELLULAR MICROBIOLOGY

Two-Photon Two-Focus Fluorescence Correlation Spectroscopy with a Tunable Distance Between the Excitation Volumes

(2008) Pascal Didier et al.   JOURNAL OF FLUORESCENCE

Small RNAs encoded within genetic islands of Salmonella typhimurium show host-induced expression and role in virulence

(2008) Gilly Padalon-Brauch et al.   NUCLEIC ACIDS RESEARCH